RNA–Protein interactions for RNA: ENST00000323418.10

ME3-201, Transcript of malic enzyme 3, humanhuman

TSL 5 BASIC

Gene ME3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-201ENST00000323418 BIN3Q9NQY0 253 aa13.62□□□□□ -0.23
ME3-201ENST00000323418 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.62□□□□□ -0.23
ME3-201ENST00000323418 SDIM1Q6ZPB5 146 aa13.6□□□□□ -0.23
ME3-201ENST00000323418 RNASE7Q9H1E1 156 aaKnown RBP13.6□□□□□ -0.23
ME3-201ENST00000323418 TRAV8-4A0A0B4J246 113 aa13.59□□□□□ -0.23
ME3-201ENST00000323418 TAGLN2P37802 199 aaKnown RBP13.59□□□□□ -0.23
ME3-201ENST00000323418 CNBPP62633 177 aaKnown RBP13.59□□□□□ -0.23
ME3-201ENST00000323418 GATD1Q8NB37 220 aa13.59□□□□□ -0.23
ME3-201ENST00000323418 OCC1Q8TAD7 63 aa13.59□□□□□ -0.23
ME3-201ENST00000323418 RPP21Q9H633 154 aaKnown RBP13.59□□□□□ -0.23
ME3-201ENST00000323418 HNRNPA3P51991 378 aaKnown RBP13.58□□□□□ -0.24
ME3-201ENST00000323418 CLRN3Q8NCR9 226 aa13.58□□□□□ -0.24
ME3-201ENST00000323418 GTSF1Q8WW33 167 aa13.58□□□□□ -0.24
ME3-201ENST00000323418 HMCN2Q8NDA2 5059 aa13.57□□□□□ -0.24
ME3-201ENST00000323418 SLPIP03973 132 aa13.57□□□□□ -0.24
ME3-201ENST00000323418 CIRBPQ14011 172 aaKnown RBP13.57□□□□□ -0.24
ME3-201ENST00000323418 TRAV26-2A0A0B4J265 109 aa13.56□□□□□ -0.24
ME3-201ENST00000323418 TWIST1Q15672 202 aa13.56□□□□□ -0.24
ME3-201ENST00000323418 OXTP01178 125 aa13.55□□□□□ -0.24
ME3-201ENST00000323418 AMTP48728 403 aa13.55□□□□□ -0.24
ME3-201ENST00000323418 RPL37AP61513 92 aaKnown RBP13.55□□□□□ -0.24
ME3-201ENST00000323418 COTL1Q14019 142 aa13.55□□□□□ -0.24
ME3-201ENST00000323418 Q6ZNX1 250 aa13.55□□□□□ -0.24
ME3-201ENST00000323418 RPL39LQ96EH5 51 aaKnown RBP13.54□□□□□ -0.24
ME3-201ENST00000323418 hDV102S1A0JD36 115 aa13.53□□□□□ -0.24
ME3-201ENST00000323418 FOXA3P55318 350 aaPredicted RBP13.53□□□□□ -0.24
ME3-201ENST00000323418 C15orf56Q8N910 161 aa13.53□□□□□ -0.24
ME3-201ENST00000323418 LYPD6BQ8NI32 183 aa13.53□□□□□ -0.24
ME3-201ENST00000323418 TMEM250H0YL14 139 aa13.52□□□□□ -0.25
ME3-201ENST00000323418 UBE2L6O14933 153 aa13.51□□□□□ -0.25
ME3-201ENST00000323418 FAM231DQ6ZW35 169 aa13.51□□□□□ -0.25
ME3-201ENST00000323418 ALKAL2Q6UX46 152 aa13.5□□□□□ -0.25
ME3-201ENST00000323418 NCR2O95944 276 aa13.49□□□□□ -0.25
ME3-201ENST00000323418 GATCO43716 136 aaKnown RBP13.48□□□□□ -0.25
ME3-201ENST00000323418 CHTF8P0CG12 524 aa13.48□□□□□ -0.25
ME3-201ENST00000323418 IGHV3-64A0A075B6Q5 118 aa13.47□□□□□ -0.25
ME3-201ENST00000323418 GAGE12HA6NDE8 117 aa13.47□□□□□ -0.25
ME3-201ENST00000323418 SDHAF1A6NFY7 115 aa13.47□□□□□ -0.25
ME3-201ENST00000323418 CT83Q5H943 113 aa13.47□□□□□ -0.25
ME3-201ENST00000323418 SPACA4Q8TDM5 124 aa13.47□□□□□ -0.25
ME3-201ENST00000323418 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.46□□□□□ -0.25
ME3-201ENST00000323418 TRBV6-5A0A0K0K1A5 114 aa13.46□□□□□ -0.25
ME3-201ENST00000323418 IGKV2-29A2NJV5 120 aaPredicted RBP13.46□□□□□ -0.25
ME3-201ENST00000323418 FAM231BA6NCW3 169 aa13.46□□□□□ -0.25
ME3-201ENST00000323418 H7C423 109 aa13.46□□□□□ -0.25
ME3-201ENST00000323418 GAS8-AS1O95177 125 aa13.46□□□□□ -0.25
ME3-201ENST00000323418 BLOC1S1P78537 153 aa13.46□□□□□ -0.25
ME3-201ENST00000323418 AKAP14Q86UN6 197 aa13.46□□□□□ -0.25
ME3-201ENST00000323418 AP5S1Q9NUS5 200 aa13.46□□□□□ -0.25
ME3-201ENST00000323418 A8MWL6 223 aa13.45□□□□□ -0.26
ME3-201ENST00000323418 A0A087WYN8 130 aa13.44□□□□□ -0.26
ME3-201ENST00000323418 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.44□□□□□ -0.26
ME3-201ENST00000323418 APCSP02743 223 aa13.44□□□□□ -0.26
ME3-201ENST00000323418 TEX261Q6UWH6 196 aa13.44□□□□□ -0.26
ME3-201ENST00000323418 SMIM15Q7Z3B0 74 aa13.44□□□□□ -0.26
ME3-201ENST00000323418 RNF185Q96GF1 192 aa13.44□□□□□ -0.26
ME3-201ENST00000323418 IGKV3OR2-268A0A0C4DH90 116 aa13.43□□□□□ -0.26
ME3-201ENST00000323418 NDUFS6O75380 124 aaKnown RBP13.43□□□□□ -0.26
ME3-201ENST00000323418 FGF6P10767 208 aa13.43□□□□□ -0.26
ME3-201ENST00000323418 ESDP10768 282 aa13.43□□□□□ -0.26
ME3-201ENST00000323418 SERTAD4-AS1Q5TG53 156 aa13.43□□□□□ -0.26
ME3-201ENST00000323418 CHCHD10Q8WYQ3 142 aaPredicted RBP13.43□□□□□ -0.26
ME3-201ENST00000323418 PLAC8Q9NZF1 115 aa13.42□□□□□ -0.26
ME3-201ENST00000323418 GVQW2A0A096LPI5 108 aaPredicted RBP13.41□□□□□ -0.26
ME3-201ENST00000323418 I3L3M4 83 aa13.41□□□□□ -0.26
ME3-201ENST00000323418 TSHBP01222 138 aa13.41□□□□□ -0.26
ME3-201ENST00000323418 MT1HL1P0DM35 61 aa13.41□□□□□ -0.26
ME3-201ENST00000323418 FOXI1Q12951 378 aa13.41□□□□□ -0.26
ME3-201ENST00000323418 AMMECR1LQ6DCA0 310 aa13.41□□□□□ -0.26
ME3-201ENST00000323418 RNASEKQ6P5S7 137 aaKnown RBP13.41□□□□□ -0.26
ME3-201ENST00000323418 LINC01551Q86U37 167 aa13.41□□□□□ -0.26
ME3-201ENST00000323418 ZNF25P17030 456 aaPredicted RBP13.4□□□□□ -0.26
ME3-201ENST00000323418 HIGD2BQ4VC39 106 aa13.4□□□□□ -0.26
ME3-201ENST00000323418 CFAP161Q6P656 301 aa13.4□□□□□ -0.26
ME3-201ENST00000323418 OR5A1Q8NGJ0 315 aa13.4□□□□□ -0.26
ME3-201ENST00000323418 hCG_2014768A0A024R1R8 64 aa13.39□□□□□ -0.27
ME3-201ENST00000323418 RPS10P46783 165 aaKnown RBP13.39□□□□□ -0.27
ME3-201ENST00000323418 CEBPGP53567 150 aa13.39□□□□□ -0.27
ME3-201ENST00000323418 TSKUQ8WUA8 353 aa13.39□□□□□ -0.27
ME3-201ENST00000323418 SMIM7Q9BQ49 75 aa13.39□□□□□ -0.27
ME3-201ENST00000323418 TMEM191AQ9H0A3 160 aa13.39□□□□□ -0.27
ME3-201ENST00000323418 TNXBP22105 4242 aa13.38□□□□□ -0.27
ME3-201ENST00000323418 HIGD1CA8MV81 97 aa13.38□□□□□ -0.27
ME3-201ENST00000323418 PMCHP20382 165 aa13.38□□□□□ -0.27
ME3-201ENST00000323418 POLR2KP53803 58 aaKnown RBP13.38□□□□□ -0.27
ME3-201ENST00000323418 COX6A2Q02221 97 aa13.38□□□□□ -0.27
ME3-201ENST00000323418 PRSS3P2Q8NHM4 247 aa13.38□□□□□ -0.27
ME3-201ENST00000323418 FAM210AQ96ND0 272 aa13.38□□□□□ -0.27
ME3-201ENST00000323418 TMEM242Q9NWH2 141 aa13.38□□□□□ -0.27
ME3-201ENST00000323418 A0A1B0GUT8 65 aa13.37□□□□□ -0.27
ME3-201ENST00000323418 SRP19P09132 144 aaKnown RBP13.37□□□□□ -0.27
ME3-201ENST00000323418 RAB4AP20338 218 aa13.37□□□□□ -0.27
ME3-201ENST00000323418 OSTCQ9NRP0 149 aa13.37□□□□□ -0.27
ME3-201ENST00000323418 Q6ZRU5 148 aa13.36□□□□□ -0.27
ME3-201ENST00000323418 TRBV27A0A0K0K1C4 114 aa13.35□□□□□ -0.27
ME3-201ENST00000323418 LINC00959A0A1B0GUT2 108 aa13.35□□□□□ -0.27
ME3-201ENST00000323418 MRPL52Q86TS9 123 aaKnown RBP13.35□□□□□ -0.27
ME3-201ENST00000323418 EIF5A2Q9GZV4 153 aaKnown RBP13.35□□□□□ -0.27
ME3-201ENST00000323418 ST20Q9HBF5 79 aa13.35□□□□□ -0.27
ME3-201ENST00000323418 V9GYV3 84 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms