RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 Q8N6K4 173 aa10.59□□□□□ -0.71
PABPC1-201ENST00000318607 C5orf56Q8N8D9 126 aa10.59□□□□□ -0.71
PABPC1-201ENST00000318607 UBE2WQ96B02 151 aa10.59□□□□□ -0.71
PABPC1-201ENST00000318607 PSMG3-AS1Q96PY0 264 aa10.59□□□□□ -0.71
PABPC1-201ENST00000318607 EIF4EBP3O60516 100 aaPredicted RBP10.58□□□□□ -0.72
PABPC1-201ENST00000318607 ZNF22P17026 224 aaPredicted RBP10.58□□□□□ -0.72
PABPC1-201ENST00000318607 DEFB136Q30KP8 78 aa10.58□□□□□ -0.72
PABPC1-201ENST00000318607 COX8CQ7Z4L0 72 aa10.58□□□□□ -0.72
PABPC1-201ENST00000318607 MINOS1-NBL1R4GNA1 71 aa10.58□□□□□ -0.72
PABPC1-201ENST00000318607 MXRA5Q9NR99 2828 aa10.58□□□□□ -0.72
PABPC1-201ENST00000318607 TRAV13-1A0A0B4J241 112 aa10.58□□□□□ -0.72
PABPC1-201ENST00000318607 IGHV3-30-3P0DP02 117 aa10.58□□□□□ -0.72
PABPC1-201ENST00000318607 RNF223E7ERA6 249 aa10.57□□□□□ -0.72
PABPC1-201ENST00000318607 COX6CP09669 75 aa10.57□□□□□ -0.72
PABPC1-201ENST00000318607 NRGNQ92686 78 aa10.57□□□□□ -0.72
PABPC1-201ENST00000318607 RPL13AP40429 203 aaKnown RBP10.57□□□□□ -0.72
PABPC1-201ENST00000318607 SIRPDQ9H106 197 aa10.57□□□□□ -0.72
PABPC1-201ENST00000318607 PAPPA-AS1Q5QFB9 102 aa10.56□□□□□ -0.72
PABPC1-201ENST00000318607 TOMM7Q9P0U1 55 aa10.56□□□□□ -0.72
PABPC1-201ENST00000318607 RHODO00212 210 aa10.56□□□□□ -0.72
PABPC1-201ENST00000318607 KLRB1Q12918 225 aa10.56□□□□□ -0.72
PABPC1-201ENST00000318607 MOB4Q9Y3A3 225 aa10.56□□□□□ -0.72
PABPC1-201ENST00000318607 A0A0J9YXY3 114 aa10.56□□□□□ -0.72
PABPC1-201ENST00000318607 NDUFA7O95182 113 aa10.56□□□□□ -0.72
PABPC1-201ENST00000318607 ADORA2A-AS1P86434 159 aa10.56□□□□□ -0.72
PABPC1-201ENST00000318607 ZNF462Q96JM2 2506 aa10.55□□□□□ -0.72
PABPC1-201ENST00000318607 DAZ1Q9NQZ3 744 aaKnown RBP10.55□□□□□ -0.72
PABPC1-201ENST00000318607 K7ENP7 123 aa10.54□□□□□ -0.72
PABPC1-201ENST00000318607 CSDC2Q9Y534 153 aaKnown RBP10.54□□□□□ -0.72
PABPC1-201ENST00000318607 PPP1R17O96001 155 aa10.54□□□□□ -0.72
PABPC1-201ENST00000318607 POLR2KP53803 58 aaKnown RBP10.54□□□□□ -0.72
PABPC1-201ENST00000318607 C11orf68Q9H3H3 251 aaKnown RBP10.54□□□□□ -0.72
PABPC1-201ENST00000318607 LOC107984640A0A0U1RRK4 108 aa10.53□□□□□ -0.72
PABPC1-201ENST00000318607 LINC01546A6NGU7 62 aa10.53□□□□□ -0.72
PABPC1-201ENST00000318607 RNASE1P07998 156 aaKnown RBP10.53□□□□□ -0.72
PABPC1-201ENST00000318607 NHLRC4P0CG21 123 aaPredicted RBP10.53□□□□□ -0.72
PABPC1-201ENST00000318607 ATP6V0E2Q8NHE4 81 aa10.53□□□□□ -0.72
PABPC1-201ENST00000318607 TMEM263Q8WUH6 116 aaKnown RBP10.53□□□□□ -0.72
PABPC1-201ENST00000318607 ITLN2Q8WWU7 325 aaPredicted RBP10.53□□□□□ -0.72
PABPC1-201ENST00000318607 UBE2E2Q96LR5 201 aa10.53□□□□□ -0.72
PABPC1-201ENST00000318607 LINC00315P59091 139 aa10.53□□□□□ -0.72
PABPC1-201ENST00000318607 ICOSQ9Y6W8 199 aa10.53□□□□□ -0.72
PABPC1-201ENST00000318607 NXPH4O95158 308 aa10.52□□□□□ -0.73
PABPC1-201ENST00000318607 IGLV4-3A0A075B6K6 122 aa10.52□□□□□ -0.73
PABPC1-201ENST00000318607 FAM236AA0A1B0GUQ0 79 aa10.52□□□□□ -0.73
PABPC1-201ENST00000318607 FAM236BA0A1B0GV22 79 aa10.52□□□□□ -0.73
PABPC1-201ENST00000318607 F5H768 121 aa10.52□□□□□ -0.73
PABPC1-201ENST00000318607 SNRPD3P62318 126 aaKnown RBP10.52□□□□□ -0.73
PABPC1-201ENST00000318607 TMEM141Q96I45 108 aa10.52□□□□□ -0.73
PABPC1-201ENST00000318607 Q9HAA7 133 aa10.52□□□□□ -0.73
PABPC1-201ENST00000318607 IGHV4-4A0A075B6R2 117 aa10.51□□□□□ -0.73
PABPC1-201ENST00000318607 IGHV4-61A0A0C4DH41 118 aa10.51□□□□□ -0.73
PABPC1-201ENST00000318607 M0QY20 66 aa10.51□□□□□ -0.73
PABPC1-201ENST00000318607 TMEM223A0PJW6 202 aa10.51□□□□□ -0.73
PABPC1-201ENST00000318607 DEFB131AP59861 70 aa10.51□□□□□ -0.73
PABPC1-201ENST00000318607 TRGV11A0A075B6L2 103 aa10.5□□□□□ -0.73
PABPC1-201ENST00000318607 A0A1W2PRX2 142 aa10.5□□□□□ -0.73
PABPC1-201ENST00000318607 I3L3M4 83 aa10.5□□□□□ -0.73
PABPC1-201ENST00000318607 NDUFA4O00483 81 aa10.5□□□□□ -0.73
PABPC1-201ENST00000318607 LEPROTO15243 131 aa10.5□□□□□ -0.73
PABPC1-201ENST00000318607 CFHR3Q02985 330 aa10.5□□□□□ -0.73
PABPC1-201ENST00000318607 C20orf203Q8NBC4 194 aa10.5□□□□□ -0.73
PABPC1-201ENST00000318607 POM121L12Q8N7R1 296 aa10.5□□□□□ -0.73
PABPC1-201ENST00000318607 IGHV1OR15-1A0A075B7D0 117 aa10.5□□□□□ -0.73
PABPC1-201ENST00000318607 PKIGQ9Y2B9 76 aa10.5□□□□□ -0.73
PABPC1-201ENST00000318607 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.49□□□□□ -0.73
PABPC1-201ENST00000318607 OOSP1A8MZH6 123 aa10.49□□□□□ -0.73
PABPC1-201ENST00000318607 H7C423 109 aa10.49□□□□□ -0.73
PABPC1-201ENST00000318607 LMO4P61968 165 aa10.49□□□□□ -0.73
PABPC1-201ENST00000318607 APRG1Q8IVJ8 170 aa10.49□□□□□ -0.73
PABPC1-201ENST00000318607 CDKN2A-AS1Q9UH64 79 aa10.49□□□□□ -0.73
PABPC1-201ENST00000318607 KLK5Q9Y337 293 aaPredicted RBP10.49□□□□□ -0.73
PABPC1-201ENST00000318607 LINC01587Q99440 93 aa10.49□□□□□ -0.73
PABPC1-201ENST00000318607 EBI3Q14213 229 aa10.49□□□□□ -0.73
PABPC1-201ENST00000318607 GAGE2AQ6NT46 116 aa10.49□□□□□ -0.73
PABPC1-201ENST00000318607 ODF3Q96PU9 254 aa10.49□□□□□ -0.73
PABPC1-201ENST00000318607 C1orf43Q9BWL3 253 aa10.49□□□□□ -0.73
PABPC1-201ENST00000318607 KIF25-AS1Q9Y6Z4 181 aa10.49□□□□□ -0.73
PABPC1-201ENST00000318607 TIMM17AQ99595 171 aa10.48□□□□□ -0.73
PABPC1-201ENST00000318607 Q9H8V8 135 aa10.48□□□□□ -0.73
PABPC1-201ENST00000318607 DOPEY1Q5JWR5 2465 aa10.48□□□□□ -0.73
PABPC1-201ENST00000318607 TMEM190Q8WZ59 177 aa10.48□□□□□ -0.73
PABPC1-201ENST00000318607 IGHV4-59P01825 116 aa10.48□□□□□ -0.73
PABPC1-201ENST00000318607 AMELXQ99217 191 aa10.48□□□□□ -0.73
PABPC1-201ENST00000318607 XCL2Q9UBD3 114 aa10.48□□□□□ -0.73
PABPC1-201ENST00000318607 C19orf84I3L1E1 186 aa10.47□□□□□ -0.73
PABPC1-201ENST00000318607 U3KQE9 123 aa10.47□□□□□ -0.73
PABPC1-201ENST00000318607 IGHV1-69DA0A0B4J2H0 117 aa10.47□□□□□ -0.73
PABPC1-201ENST00000318607 TRBV10-2A0A0K0K1G8 114 aa10.47□□□□□ -0.73
PABPC1-201ENST00000318607 SMIM9A6NGZ8 99 aa10.47□□□□□ -0.73
PABPC1-201ENST00000318607 IGHV1-69P01742 117 aa10.47□□□□□ -0.73
PABPC1-201ENST00000318607 MRPL53Q96EL3 112 aaKnown RBP10.47□□□□□ -0.73
PABPC1-201ENST00000318607 FAM223BA6NKX1 122 aa10.46□□□□□ -0.73
PABPC1-201ENST00000318607 Q6ZSN1 163 aa10.46□□□□□ -0.73
PABPC1-201ENST00000318607 FAM223AQ8IWN6 122 aa10.46□□□□□ -0.73
PABPC1-201ENST00000318607 LGALS9O00182 355 aa10.46□□□□□ -0.73
PABPC1-201ENST00000318607 PIK3CD-AS1Q5SR53 167 aa10.46□□□□□ -0.73
PABPC1-201ENST00000318607 SEC61GP60059 68 aa10.46□□□□□ -0.74
PABPC1-201ENST00000318607 PRIMA1Q86XR5 153 aa10.46□□□□□ -0.74
PABPC1-201ENST00000318607 TRBV27A0A0K0K1C4 114 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms