RNA–Protein interactions for RNA: ENST00000309602.4

LRFN4-201, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN4, Length 2,431 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-201ENST00000309602 MRPL16Q9NX20 251 aaKnown RBP14.37□□□□□ -0.11
LRFN4-201ENST00000309602 TNFRSF18Q9Y5U5 241 aa14.37□□□□□ -0.11
LRFN4-201ENST00000309602 AMELXQ99217 191 aa14.37□□□□□ -0.11
LRFN4-201ENST00000309602 NOTCH2Q04721 2471 aa14.37□□□□□ -0.11
LRFN4-201ENST00000309602 FAM104AQ969W3 186 aa14.36□□□□□ -0.11
LRFN4-201ENST00000309602 VCX2Q9H322 139 aa14.36□□□□□ -0.11
LRFN4-201ENST00000309602 A0A0J9YXV3 536 aa14.36□□□□□ -0.11
LRFN4-201ENST00000309602 J3QQQ9 107 aa14.36□□□□□ -0.11
LRFN4-201ENST00000309602 XCL2Q9UBD3 114 aa14.36□□□□□ -0.11
LRFN4-201ENST00000309602 NF1P21359 2839 aa14.36□□□□□ -0.11
LRFN4-201ENST00000309602 TMEM223A0PJW6 202 aa14.35□□□□□ -0.11
LRFN4-201ENST00000309602 CCL24O00175 119 aa14.35□□□□□ -0.11
LRFN4-201ENST00000309602 ZNF22P17026 224 aaPredicted RBP14.35□□□□□ -0.11
LRFN4-201ENST00000309602 TRAV25A0A0B4J276 109 aa14.34□□□□□ -0.11
LRFN4-201ENST00000309602 KRTAP1-1Q07627 177 aa14.34□□□□□ -0.11
LRFN4-201ENST00000309602 CEMP1Q6PRD7 247 aaPredicted RBP14.34□□□□□ -0.11
LRFN4-201ENST00000309602 SPXQ9BT56 116 aa14.34□□□□□ -0.11
LRFN4-201ENST00000309602 PYGO1Q9Y3Y4 419 aa14.34□□□□□ -0.11
LRFN4-201ENST00000309602 WNK1Q9H4A3 2382 aa14.34□□□□□ -0.11
LRFN4-201ENST00000309602 AZU1P20160 251 aa14.34□□□□□ -0.11
LRFN4-201ENST00000309602 BEAN1Q3B7T3 259 aa14.34□□□□□ -0.11
LRFN4-201ENST00000309602 ACANP16112 2415 aa14.33□□□□□ -0.11
LRFN4-201ENST00000309602 RHODO00212 210 aa14.33□□□□□ -0.12
LRFN4-201ENST00000309602 LGALS3P17931 250 aaKnown RBP14.33□□□□□ -0.12
LRFN4-201ENST00000309602 UBE2D1P51668 147 aa14.33□□□□□ -0.12
LRFN4-201ENST00000309602 CUBNO60494 3623 aa14.33□□□□□ -0.12
LRFN4-201ENST00000309602 A6NJY4 79 aa14.33□□□□□ -0.12
LRFN4-201ENST00000309602 STHQ8IWL8 128 aa14.33□□□□□ -0.12
LRFN4-201ENST00000309602 CITED2Q99967 270 aaPredicted RBP14.33□□□□□ -0.12
LRFN4-201ENST00000309602 LEPROTO15243 131 aa14.32□□□□□ -0.12
LRFN4-201ENST00000309602 SPANXB1Q9NS25 103 aaPredicted RBP14.32□□□□□ -0.12
LRFN4-201ENST00000309602 IGHV3-64A0A075B6Q5 118 aa14.32□□□□□ -0.12
LRFN4-201ENST00000309602 SLC25A29Q8N8R3 303 aa14.32□□□□□ -0.12
LRFN4-201ENST00000309602 CHCHD7Q9BUK0 85 aa14.32□□□□□ -0.12
LRFN4-201ENST00000309602 PGPEP1Q9NXJ5 209 aa14.32□□□□□ -0.12
LRFN4-201ENST00000309602 RS1O15537 224 aa14.31□□□□□ -0.12
LRFN4-201ENST00000309602 IGHV3-53P01767 116 aa14.31□□□□□ -0.12
LRFN4-201ENST00000309602 C1orf158Q8N1D5 194 aa14.31□□□□□ -0.12
LRFN4-201ENST00000309602 IGHV3OR16-12A0A075B7B8 117 aa14.31□□□□□ -0.12
LRFN4-201ENST00000309602 G3V4G9 280 aa14.31□□□□□ -0.12
LRFN4-201ENST00000309602 IGHV3-30P01768 117 aa14.3□□□□□ -0.12
LRFN4-201ENST00000309602 IGHV3-30-5P0DP03 117 aa14.3□□□□□ -0.12
LRFN4-201ENST00000309602 RNASE13Q5GAN3 156 aaKnown RBP14.3□□□□□ -0.12
LRFN4-201ENST00000309602 H3BMG7 143 aa14.3□□□□□ -0.12
LRFN4-201ENST00000309602 IGHV3-38A0A0C4DH36 116 aa14.29□□□□□ -0.12
LRFN4-201ENST00000309602 LINC01006Q8NI28 216 aa14.29□□□□□ -0.12
LRFN4-201ENST00000309602 YAE1D1Q9NRH1 226 aa14.29□□□□□ -0.12
LRFN4-201ENST00000309602 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.28□□□□□ -0.12
LRFN4-201ENST00000309602 IGKV2-29A2NJV5 120 aaPredicted RBP14.28□□□□□ -0.12
LRFN4-201ENST00000309602 APOMO95445 188 aa14.28□□□□□ -0.12
LRFN4-201ENST00000309602 UBE2D4Q9Y2X8 147 aa14.27□□□□□ -0.12
LRFN4-201ENST00000309602 TSSC4Q9Y5U2 329 aaPredicted RBP14.27□□□□□ -0.12
LRFN4-201ENST00000309602 CRYBA4P53673 196 aa14.27□□□□□ -0.13
LRFN4-201ENST00000309602 MRPS36P82909 103 aaKnown RBP14.27□□□□□ -0.13
LRFN4-201ENST00000309602 DNAJC30Q96LL9 226 aa14.27□□□□□ -0.13
LRFN4-201ENST00000309602 IL17DQ8TAD2 202 aa14.26□□□□□ -0.13
LRFN4-201ENST00000309602 TSPAN13O95857 204 aa14.26□□□□□ -0.13
LRFN4-201ENST00000309602 WFDC2Q14508 124 aa14.26□□□□□ -0.13
LRFN4-201ENST00000309602 NDUFA11Q86Y39 141 aa14.26□□□□□ -0.13
LRFN4-201ENST00000309602 SPANXA1Q9NS26 97 aa14.25□□□□□ -0.13
LRFN4-201ENST00000309602 ANK3Q12955 4377 aaKnown RBP14.25□□□□□ -0.13
LRFN4-201ENST00000309602 F8W1H4 67 aa14.25□□□□□ -0.13
LRFN4-201ENST00000309602 RNASE1P07998 156 aaKnown RBP14.25□□□□□ -0.13
LRFN4-201ENST00000309602 RPL24P83731 157 aaKnown RBP14.25□□□□□ -0.13
LRFN4-201ENST00000309602 SETD2Q9BYW2 2564 aaPredicted RBP14.25□□□□□ -0.13
LRFN4-201ENST00000309602 TRGV1A0A0A0MS02 117 aa14.24□□□□□ -0.13
LRFN4-201ENST00000309602 C16orf95Q9H693 158 aa14.24□□□□□ -0.13
LRFN4-201ENST00000309602 TEX48A0A1B0GUV7 120 aa14.24□□□□□ -0.13
LRFN4-201ENST00000309602 CFC1BP0CG36 223 aa14.24□□□□□ -0.13
LRFN4-201ENST00000309602 CFC1P0CG37 223 aa14.24□□□□□ -0.13
LRFN4-201ENST00000309602 Q6ZUT4 128 aa14.24□□□□□ -0.13
LRFN4-201ENST00000309602 C10orf126Q8N4M7 172 aa14.24□□□□□ -0.13
LRFN4-201ENST00000309602 IGHV3-30-3P0DP02 117 aa14.23□□□□□ -0.13
LRFN4-201ENST00000309602 MTURNQ8N3F0 131 aa14.23□□□□□ -0.13
LRFN4-201ENST00000309602 SFTA2Q6UW10 78 aa14.23□□□□□ -0.13
LRFN4-201ENST00000309602 PRO0461Q9UI25 63 aa14.23□□□□□ -0.13
LRFN4-201ENST00000309602 TRAV8-3A0A0A6YYJ7 113 aa14.22□□□□□ -0.13
LRFN4-201ENST00000309602 TIMM21Q9BVV7 248 aa14.22□□□□□ -0.13
LRFN4-201ENST00000309602 GAGE13Q4V321 117 aa14.21□□□□□ -0.13
LRFN4-201ENST00000309602 TINCRA0A1B0GVN0 87 aa14.21□□□□□ -0.14
LRFN4-201ENST00000309602 ADARB2-AS1A8MUL3 147 aa14.21□□□□□ -0.14
LRFN4-201ENST00000309602 Q6ZTI0 123 aa14.21□□□□□ -0.14
LRFN4-201ENST00000309602 WFDC10AQ9H1F0 79 aa14.21□□□□□ -0.14
LRFN4-201ENST00000309602 MTORP42345 2549 aa14.2□□□□□ -0.14
LRFN4-201ENST00000309602 FLNBO75369 2602 aaKnown RBP14.2□□□□□ -0.14
LRFN4-201ENST00000309602 LOC107984156A0A0G2JMH3 177 aa14.2□□□□□ -0.14
LRFN4-201ENST00000309602 A0A0J9YXY3 114 aa14.2□□□□□ -0.14
LRFN4-201ENST00000309602 GIG44P09565 113 aaPredicted RBP14.2□□□□□ -0.14
LRFN4-201ENST00000309602 ARL17AQ8IVW1 177 aa14.2□□□□□ -0.14
LRFN4-201ENST00000309602 NIPBLQ6KC79 2804 aaeCLIP14.19□□□□□ -0.14
LRFN4-201ENST00000309602 UBE2D3P61077 147 aa14.19□□□□□ -0.14
LRFN4-201ENST00000309602 UBE2D2P62837 147 aa14.19□□□□□ -0.14
LRFN4-201ENST00000309602 TMEM263Q8WUH6 116 aaKnown RBP14.19□□□□□ -0.14
LRFN4-201ENST00000309602 IGHV1-58A0A0C4DH39 117 aa14.19□□□□□ -0.14
LRFN4-201ENST00000309602 A4D1N5 150 aa14.19□□□□□ -0.14
LRFN4-201ENST00000309602 SH2D6Q7Z4S9 175 aa14.18□□□□□ -0.14
LRFN4-201ENST00000309602 EIF4EBP3O60516 100 aaPredicted RBP14.17□□□□□ -0.14
LRFN4-201ENST00000309602 MUSTN1Q8IVN3 82 aa14.17□□□□□ -0.14
LRFN4-201ENST00000309602 SETXQ7Z333 2677 aaKnown RBP14.17□□□□□ -0.14
LRFN4-201ENST00000309602 ETDBQ3ZM63 59 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms