RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 FAM223BA6NKX1 122 aa7.71□□□□□ -1.17
APOBEC3F-201ENST00000308521 UQCRQO14949 82 aa7.71□□□□□ -1.17
APOBEC3F-201ENST00000308521 IGLV1-40P01703 118 aa7.71□□□□□ -1.17
APOBEC3F-201ENST00000308521 PAPPA-AS1Q5QFB9 102 aa7.71□□□□□ -1.17
APOBEC3F-201ENST00000308521 FAM223AQ8IWN6 122 aa7.71□□□□□ -1.17
APOBEC3F-201ENST00000308521 Q8N1Y9 231 aa7.71□□□□□ -1.17
APOBEC3F-201ENST00000308521 ZFAND2AQ8N6M9 145 aa7.71□□□□□ -1.17
APOBEC3F-201ENST00000308521 HIVEP1P15822 2718 aa7.71□□□□□ -1.18
APOBEC3F-201ENST00000308521 C9JAW5 83 aa7.71□□□□□ -1.18
APOBEC3F-201ENST00000308521 OVOL1O14753 267 aa7.71□□□□□ -1.18
APOBEC3F-201ENST00000308521 LINC00694P0DN24 101 aa7.71□□□□□ -1.18
APOBEC3F-201ENST00000308521 CFHR3Q02985 330 aa7.71□□□□□ -1.18
APOBEC3F-201ENST00000308521 C3orf22Q8N5N4 141 aa7.71□□□□□ -1.18
APOBEC3F-201ENST00000308521 MRAPQ8TCY5 172 aa7.71□□□□□ -1.18
APOBEC3F-201ENST00000308521 RPL39LQ96EH5 51 aaKnown RBP7.71□□□□□ -1.18
APOBEC3F-201ENST00000308521 ZNF702PQ9H963 129 aa7.71□□□□□ -1.18
APOBEC3F-201ENST00000308521 EDN2P20800 178 aa7.7□□□□□ -1.18
APOBEC3F-201ENST00000308521 ZNRF2Q8NHG8 242 aa7.7□□□□□ -1.18
APOBEC3F-201ENST00000308521 TMEM101Q96IK0 257 aa7.7□□□□□ -1.18
APOBEC3F-201ENST00000308521 IGKV3-7A0A075B6H7 116 aa7.7□□□□□ -1.18
APOBEC3F-201ENST00000308521 SCGB1D4Q6XE38 83 aa7.7□□□□□ -1.18
APOBEC3F-201ENST00000308521 PLEKHB2Q96CS7 222 aa7.7□□□□□ -1.18
APOBEC3F-201ENST00000308521 C20orf173Q96LM9 149 aa7.7□□□□□ -1.18
APOBEC3F-201ENST00000308521 SETXQ7Z333 2677 aaKnown RBP7.69□□□□□ -1.18
APOBEC3F-201ENST00000308521 LGALS9O00182 355 aa7.69□□□□□ -1.18
APOBEC3F-201ENST00000308521 S100A4P26447 101 aaKnown RBP7.69□□□□□ -1.18
APOBEC3F-201ENST00000308521 PSMB8P28062 276 aa7.69□□□□□ -1.18
APOBEC3F-201ENST00000308521 HERVK_113P61574 105 aa7.69□□□□□ -1.18
APOBEC3F-201ENST00000308521 SRSF9Q13242 221 aaKnown RBP eCLIP7.69□□□□□ -1.18
APOBEC3F-201ENST00000308521 GPHB5Q86YW7 130 aa7.69□□□□□ -1.18
APOBEC3F-201ENST00000308521 APRG1Q8IVJ8 170 aa7.69□□□□□ -1.18
APOBEC3F-201ENST00000308521 C14orf178Q8N769 122 aaPredicted RBP7.69□□□□□ -1.18
APOBEC3F-201ENST00000308521 LINC00526Q96FQ7 95 aa7.69□□□□□ -1.18
APOBEC3F-201ENST00000308521 FAM19A4Q96LR4 140 aa7.69□□□□□ -1.18
APOBEC3F-201ENST00000308521 PHLDA3Q9Y5J5 127 aa7.69□□□□□ -1.18
APOBEC3F-201ENST00000308521 FN1P02751 2386 aaKnown RBP7.69□□□□□ -1.18
APOBEC3F-201ENST00000308521 CRYGDP07320 174 aa7.69□□□□□ -1.18
APOBEC3F-201ENST00000308521 FAM19A5Q7Z5A7 132 aaPredicted RBP7.69□□□□□ -1.18
APOBEC3F-201ENST00000308521 USMG5Q96IX5 58 aa7.69□□□□□ -1.18
APOBEC3F-201ENST00000308521 ESM1Q9NQ30 184 aa7.69□□□□□ -1.18
APOBEC3F-201ENST00000308521 PRO1854Q9UHT4 67 aa7.69□□□□□ -1.18
APOBEC3F-201ENST00000308521 NXPH4O95158 308 aa7.68□□□□□ -1.18
APOBEC3F-201ENST00000308521 ATXN8Q156A1 80 aa7.68□□□□□ -1.18
APOBEC3F-201ENST00000308521 DEFB121Q5J5C9 76 aa7.68□□□□□ -1.18
APOBEC3F-201ENST00000308521 IGHV4OR15-8A0A075B7B6 117 aa7.68□□□□□ -1.18
APOBEC3F-201ENST00000308521 A0A087WW49 117 aa7.68□□□□□ -1.18
APOBEC3F-201ENST00000308521 A0A0J9YY99 117 aa7.68□□□□□ -1.18
APOBEC3F-201ENST00000308521 SOCS3O14543 225 aa7.68□□□□□ -1.18
APOBEC3F-201ENST00000308521 C9orf153Q5TBE3 101 aa7.68□□□□□ -1.18
APOBEC3F-201ENST00000308521 C18orf65Q6ZTR6 163 aa7.68□□□□□ -1.18
APOBEC3F-201ENST00000308521 C11orf44Q8N8P7 122 aa7.68□□□□□ -1.18
APOBEC3F-201ENST00000308521 TMEM141Q96I45 108 aa7.68□□□□□ -1.18
APOBEC3F-201ENST00000308521 JMJD1CQ15652 2540 aa7.68□□□□□ -1.18
APOBEC3F-201ENST00000308521 IGLV4-69A0A075B6H9 119 aa7.67□□□□□ -1.18
APOBEC3F-201ENST00000308521 ACYP1P07311 99 aa7.67□□□□□ -1.18
APOBEC3F-201ENST00000308521 MGPP08493 103 aa7.67□□□□□ -1.18
APOBEC3F-201ENST00000308521 TRBV10-2A0A0K0K1G8 114 aa7.67□□□□□ -1.18
APOBEC3F-201ENST00000308521 DNAJC9-AS1A6NH13 148 aa7.67□□□□□ -1.18
APOBEC3F-201ENST00000308521 IGIPA6NJ69 53 aa7.67□□□□□ -1.18
APOBEC3F-201ENST00000308521 C11orf86A6NJI1 115 aa7.67□□□□□ -1.18
APOBEC3F-201ENST00000308521 H3BMM0 161 aa7.67□□□□□ -1.18
APOBEC3F-201ENST00000308521 H3BUA1 57 aa7.67□□□□□ -1.18
APOBEC3F-201ENST00000308521 PMVKQ15126 192 aa7.67□□□□□ -1.18
APOBEC3F-201ENST00000308521 TMEM170BQ5T4T1 132 aa7.67□□□□□ -1.18
APOBEC3F-201ENST00000308521 NTN5Q8WTR8 489 aaPredicted RBP7.67□□□□□ -1.18
APOBEC3F-201ENST00000308521 UBE2WQ96B02 151 aa7.67□□□□□ -1.18
APOBEC3F-201ENST00000308521 KIF25-AS1Q9Y6Z4 181 aa7.67□□□□□ -1.18
APOBEC3F-201ENST00000308521 TSHBP01222 138 aa7.66□□□□□ -1.18
APOBEC3F-201ENST00000308521 RPL11P62913 178 aaKnown RBP7.66□□□□□ -1.18
APOBEC3F-201ENST00000308521 DEFB136Q30KP8 78 aa7.66□□□□□ -1.18
APOBEC3F-201ENST00000308521 H3BT86 120 aa7.66□□□□□ -1.18
APOBEC3F-201ENST00000308521 RNASE3P12724 160 aaKnown RBP7.66□□□□□ -1.18
APOBEC3F-201ENST00000308521 POLR2KP53803 58 aaKnown RBP7.66□□□□□ -1.18
APOBEC3F-201ENST00000308521 LINC00315P59091 139 aa7.66□□□□□ -1.18
APOBEC3F-201ENST00000308521 HERVK_113P63121 156 aa7.66□□□□□ -1.18
APOBEC3F-201ENST00000308521 SLC25A29Q8N8R3 303 aa7.66□□□□□ -1.18
APOBEC3F-201ENST00000308521 KLHL30-AS1Q8NEE0 82 aa7.66□□□□□ -1.18
APOBEC3F-201ENST00000308521 DUX3Q96PT4 197 aa7.66□□□□□ -1.18
APOBEC3F-201ENST00000308521 TIMM17AQ99595 171 aa7.66□□□□□ -1.18
APOBEC3F-201ENST00000308521 IGHV3-30P01768 117 aa7.65□□□□□ -1.18
APOBEC3F-201ENST00000308521 CFC1BP0CG36 223 aa7.65□□□□□ -1.18
APOBEC3F-201ENST00000308521 CFC1P0CG37 223 aa7.65□□□□□ -1.18
APOBEC3F-201ENST00000308521 IGHV3-30-5P0DP03 117 aa7.65□□□□□ -1.18
APOBEC3F-201ENST00000308521 DEFB1P60022 68 aa7.65□□□□□ -1.18
APOBEC3F-201ENST00000308521 KHDC1LQ5JSQ8 128 aa7.65□□□□□ -1.18
APOBEC3F-201ENST00000308521 A0A0B4J2C4 111 aa7.65□□□□□ -1.18
APOBEC3F-201ENST00000308521 NDUFA4O00483 81 aa7.65□□□□□ -1.18
APOBEC3F-201ENST00000308521 LINC01620Q4KN68 170 aa7.65□□□□□ -1.18
APOBEC3F-201ENST00000308521 CHCHD5Q9BSY4 110 aa7.65□□□□□ -1.18
APOBEC3F-201ENST00000308521 NSD1Q96L73 2696 aaPredicted RBP7.65□□□□□ -1.18
APOBEC3F-201ENST00000308521 VCYO14598 125 aa7.65□□□□□ -1.19
APOBEC3F-201ENST00000308521 GNRH2O43555 120 aa7.65□□□□□ -1.19
APOBEC3F-201ENST00000308521 SPRY2O43597 315 aa7.65□□□□□ -1.19
APOBEC3F-201ENST00000308521 RNASE4P34096 147 aaKnown RBP7.65□□□□□ -1.19
APOBEC3F-201ENST00000308521 Q6ZSV7 163 aa7.65□□□□□ -1.19
APOBEC3F-201ENST00000308521 TP53TG1Q9Y2A0 90 aa7.65□□□□□ -1.19
APOBEC3F-201ENST00000308521 LY6G6DO95868 133 aa7.64□□□□□ -1.19
APOBEC3F-201ENST00000308521 CRYGAP11844 174 aa7.64□□□□□ -1.19
APOBEC3F-201ENST00000308521 EMP1P54849 157 aa7.64□□□□□ -1.19
APOBEC3F-201ENST00000308521 SYNJ2BPP57105 145 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms