RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 KIAA1644Q3SXP7 199 aa16.65■□□□□ 0.26
HOXC9-201ENST00000303450 LINC01556Q5JQF7 62 aa16.65■□□□□ 0.26
HOXC9-201ENST00000303450 MRPL18Q9H0U6 180 aaKnown RBP16.65■□□□□ 0.26
HOXC9-201ENST00000303450 TMEM262E9PQX1 116 aa16.65■□□□□ 0.26
HOXC9-201ENST00000303450 NIT1Q86X76 327 aa16.65■□□□□ 0.26
HOXC9-201ENST00000303450 IGHV3-30P01768 117 aa16.64■□□□□ 0.25
HOXC9-201ENST00000303450 IGHV3-33P01772 117 aa16.64■□□□□ 0.25
HOXC9-201ENST00000303450 IGHV3-30-3P0DP02 117 aa16.64■□□□□ 0.25
HOXC9-201ENST00000303450 IGHV3-30-5P0DP03 117 aa16.64■□□□□ 0.25
HOXC9-201ENST00000303450 FABP9Q0Z7S8 132 aa16.64■□□□□ 0.25
HOXC9-201ENST00000303450 Q6ZR54 194 aa16.64■□□□□ 0.25
HOXC9-201ENST00000303450 KIR2DL4Q99706 377 aa16.64■□□□□ 0.25
HOXC9-201ENST00000303450 TMEM243Q9BU79 118 aa16.64■□□□□ 0.25
HOXC9-201ENST00000303450 RPL32P62910 135 aaKnown RBP16.63■□□□□ 0.25
HOXC9-201ENST00000303450 TRAPPC1Q9Y5R8 145 aa16.63■□□□□ 0.25
HOXC9-201ENST00000303450 A0A087WX48 190 aa16.62■□□□□ 0.25
HOXC9-201ENST00000303450 K7EP13 123 aa16.62■□□□□ 0.25
HOXC9-201ENST00000303450 TSHBP01222 138 aa16.62■□□□□ 0.25
HOXC9-201ENST00000303450 PKIAP61925 76 aa16.62■□□□□ 0.25
HOXC9-201ENST00000303450 SMIM2Q9BVW6 85 aa16.62■□□□□ 0.25
HOXC9-201ENST00000303450 FCER1GP30273 86 aa16.61■□□□□ 0.25
HOXC9-201ENST00000303450 GAGE6Q13070 117 aa16.61■□□□□ 0.25
HOXC9-201ENST00000303450 C10orf126Q8N4M7 172 aa16.61■□□□□ 0.25
HOXC9-201ENST00000303450 KRTAP1-5Q9BYS1 174 aa16.61■□□□□ 0.25
HOXC9-201ENST00000303450 MAP1LC3AQ9H492 121 aa16.61■□□□□ 0.25
HOXC9-201ENST00000303450 Q8N3U1 123 aa16.6■□□□□ 0.25
HOXC9-201ENST00000303450 UBE2L6O14933 153 aa16.6■□□□□ 0.25
HOXC9-201ENST00000303450 ATP6V1G1O75348 118 aa16.6■□□□□ 0.25
HOXC9-201ENST00000303450 CHCHD7Q9BUK0 85 aa16.6■□□□□ 0.25
HOXC9-201ENST00000303450 LOC389332A0A1B0GUA5 103 aa16.59■□□□□ 0.25
HOXC9-201ENST00000303450 S100A1P23297 94 aa16.59■□□□□ 0.25
HOXC9-201ENST00000303450 SCO1O75880 301 aa16.58■□□□□ 0.24
HOXC9-201ENST00000303450 RYR3Q15413 4870 aa16.57■□□□□ 0.24
HOXC9-201ENST00000303450 PRSS47A8MTI9 375 aa16.57■□□□□ 0.24
HOXC9-201ENST00000303450 TCAPO15273 167 aa16.57■□□□□ 0.24
HOXC9-201ENST00000303450 MPV17L2Q567V2 206 aa16.57■□□□□ 0.24
HOXC9-201ENST00000303450 ALKBH7Q9BT30 221 aaPredicted RBP16.56■□□□□ 0.24
HOXC9-201ENST00000303450 IGKV2D-29A0A075B6S2 120 aaPredicted RBP16.55■□□□□ 0.24
HOXC9-201ENST00000303450 IGKV2-29A2NJV5 120 aaPredicted RBP16.55■□□□□ 0.24
HOXC9-201ENST00000303450 ESDP10768 282 aa16.55■□□□□ 0.24
HOXC9-201ENST00000303450 RAB5AP20339 215 aa16.55■□□□□ 0.24
HOXC9-201ENST00000303450 C1orf134Q5TEV5 83 aa16.55■□□□□ 0.24
HOXC9-201ENST00000303450 H7C423 109 aa16.54■□□□□ 0.24
HOXC9-201ENST00000303450 RBX1P62877 108 aa16.54■□□□□ 0.24
HOXC9-201ENST00000303450 C6orf223Q8N319 242 aa16.54■□□□□ 0.24
HOXC9-201ENST00000303450 Q8N976 141 aa16.54■□□□□ 0.24
HOXC9-201ENST00000303450 IBA57-AS1B1ANH7 110 aa16.53■□□□□ 0.24
HOXC9-201ENST00000303450 Q8N8P6 123 aa16.53■□□□□ 0.24
HOXC9-201ENST00000303450 KLK12Q9UKR0 248 aa16.53■□□□□ 0.24
HOXC9-201ENST00000303450 COLCA2A8K830 154 aa16.52■□□□□ 0.24
HOXC9-201ENST00000303450 AMMECR1LQ6DCA0 310 aa16.52■□□□□ 0.24
HOXC9-201ENST00000303450 NXT2Q9NPJ8 142 aaKnown RBP16.52■□□□□ 0.24
HOXC9-201ENST00000303450 A0A1B0GUV1 79 aa16.51■□□□□ 0.23
HOXC9-201ENST00000303450 ANGP03950 147 aaKnown RBP16.51■□□□□ 0.23
HOXC9-201ENST00000303450 BTF3P20290 206 aaKnown RBP16.51■□□□□ 0.23
HOXC9-201ENST00000303450 IFI27P40305 119 aaPredicted RBP16.5■□□□□ 0.23
HOXC9-201ENST00000303450 LAGE3Q14657 143 aa16.5■□□□□ 0.23
HOXC9-201ENST00000303450 RNASEKQ6P5S7 137 aaKnown RBP16.5■□□□□ 0.23
HOXC9-201ENST00000303450 FGF6P10767 208 aa16.5■□□□□ 0.23
HOXC9-201ENST00000303450 PRSS3P2Q8NHM4 247 aa16.49■□□□□ 0.23
HOXC9-201ENST00000303450 TMEM18Q96B42 140 aa16.49■□□□□ 0.23
HOXC9-201ENST00000303450 Q9HAA7 133 aa16.48■□□□□ 0.23
HOXC9-201ENST00000303450 IGLV4-60A0A075B6I1 120 aa16.47■□□□□ 0.23
HOXC9-201ENST00000303450 TRAV8-3A0A0A6YYJ7 113 aa16.47■□□□□ 0.23
HOXC9-201ENST00000303450 NFE4Q86UQ8 179 aa16.47■□□□□ 0.23
HOXC9-201ENST00000303450 C20orf203Q8NBC4 194 aa16.47■□□□□ 0.23
HOXC9-201ENST00000303450 UBE2WQ96B02 151 aa16.47■□□□□ 0.23
HOXC9-201ENST00000303450 K7EMI3 77 aa16.46■□□□□ 0.23
HOXC9-201ENST00000303450 CRPP02741 224 aa16.46■□□□□ 0.23
HOXC9-201ENST00000303450 ZNF25P17030 456 aaPredicted RBP16.46■□□□□ 0.23
HOXC9-201ENST00000303450 TMEM101Q96IK0 257 aa16.46■□□□□ 0.23
HOXC9-201ENST00000303450 SMAGPQ0VAQ4 97 aa16.45■□□□□ 0.22
HOXC9-201ENST00000303450 ORMDL2Q53FV1 153 aa16.45■□□□□ 0.22
HOXC9-201ENST00000303450 TRGC2P03986 189 aa16.45■□□□□ 0.22
HOXC9-201ENST00000303450 LINC00269Q8N2A0 174 aa16.45■□□□□ 0.22
HOXC9-201ENST00000303450 RTL8CO15255 209 aa16.44■□□□□ 0.22
HOXC9-201ENST00000303450 Q0VG73 95 aa16.44■□□□□ 0.22
HOXC9-201ENST00000303450 DGAT2L7PQ6IED9 249 aa16.44■□□□□ 0.22
HOXC9-201ENST00000303450 MRPL52Q86TS9 123 aaKnown RBP16.44■□□□□ 0.22
HOXC9-201ENST00000303450 OR5A1Q8NGJ0 315 aa16.44■□□□□ 0.22
HOXC9-201ENST00000303450 C18orf32Q8TCD1 76 aa16.44■□□□□ 0.22
HOXC9-201ENST00000303450 RPL39P62891 51 aaKnown RBP16.43■□□□□ 0.22
HOXC9-201ENST00000303450 DNAH2Q9P225 4427 aa16.43■□□□□ 0.22
HOXC9-201ENST00000303450 CLPSL2Q6UWE3 100 aa16.42■□□□□ 0.22
HOXC9-201ENST00000303450 ENHOQ6UWT2 76 aa16.42■□□□□ 0.22
HOXC9-201ENST00000303450 FA2HQ7L5A8 372 aa16.42■□□□□ 0.22
HOXC9-201ENST00000303450 UBE2D4Q9Y2X8 147 aa16.42■□□□□ 0.22
HOXC9-201ENST00000303450 FRAS1Q86XX4 4008 aa16.41■□□□□ 0.22
HOXC9-201ENST00000303450 REG3AQ06141 175 aa16.41■□□□□ 0.22
HOXC9-201ENST00000303450 PRR34Q9NV39 138 aa16.41■□□□□ 0.22
HOXC9-201ENST00000303450 Q6ZRN7 208 aaPredicted RBP16.4■□□□□ 0.22
HOXC9-201ENST00000303450 RMI2Q96E14 147 aa16.4■□□□□ 0.22
HOXC9-201ENST00000303450 TIMM21Q9BVV7 248 aa16.4■□□□□ 0.22
HOXC9-201ENST00000303450 CSDC2Q9Y534 153 aaKnown RBP16.4■□□□□ 0.22
HOXC9-201ENST00000303450 MIAQ16674 131 aa16.39■□□□□ 0.21
HOXC9-201ENST00000303450 TM2D2Q9BX73 214 aa16.39■□□□□ 0.21
HOXC9-201ENST00000303450 CYSLTR1Q9Y271 337 aa16.39■□□□□ 0.21
HOXC9-201ENST00000303450 IGKV2D-24A0A075B6R9 120 aa16.38■□□□□ 0.21
HOXC9-201ENST00000303450 G0S2P27469 103 aa16.38■□□□□ 0.21
HOXC9-201ENST00000303450 C2orf66Q6UXQ4 117 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms