RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 KIAA1644Q3SXP7 199 aa16.65■□□□□ 0.26
HOXC9-201ENST00000303450 LINC01556Q5JQF7 62 aa16.65■□□□□ 0.26
HOXC9-201ENST00000303450 MRPL18Q9H0U6 180 aaKnown RBP16.65■□□□□ 0.26
HOXC9-201ENST00000303450 TMEM262E9PQX1 116 aa16.65■□□□□ 0.26
HOXC9-201ENST00000303450 NIT1Q86X76 327 aa16.65■□□□□ 0.26
HOXC9-201ENST00000303450 IGHV3-30P01768 117 aa16.64■□□□□ 0.25
HOXC9-201ENST00000303450 IGHV3-33P01772 117 aa16.64■□□□□ 0.25
HOXC9-201ENST00000303450 IGHV3-30-3P0DP02 117 aa16.64■□□□□ 0.25
HOXC9-201ENST00000303450 IGHV3-30-5P0DP03 117 aa16.64■□□□□ 0.25
HOXC9-201ENST00000303450 FABP9Q0Z7S8 132 aa16.64■□□□□ 0.25
HOXC9-201ENST00000303450 Q6ZR54 194 aa16.64■□□□□ 0.25
HOXC9-201ENST00000303450 KIR2DL4Q99706 377 aa16.64■□□□□ 0.25
HOXC9-201ENST00000303450 TMEM243Q9BU79 118 aa16.64■□□□□ 0.25
HOXC9-201ENST00000303450 RPL32P62910 135 aaKnown RBP16.63■□□□□ 0.25
HOXC9-201ENST00000303450 TRAPPC1Q9Y5R8 145 aa16.63■□□□□ 0.25
HOXC9-201ENST00000303450 A0A087WX48 190 aa16.62■□□□□ 0.25
HOXC9-201ENST00000303450 K7EP13 123 aa16.62■□□□□ 0.25
HOXC9-201ENST00000303450 TSHBP01222 138 aa16.62■□□□□ 0.25
HOXC9-201ENST00000303450 PKIAP61925 76 aa16.62■□□□□ 0.25
HOXC9-201ENST00000303450 SMIM2Q9BVW6 85 aa16.62■□□□□ 0.25
HOXC9-201ENST00000303450 FCER1GP30273 86 aa16.61■□□□□ 0.25
HOXC9-201ENST00000303450 GAGE6Q13070 117 aa16.61■□□□□ 0.25
HOXC9-201ENST00000303450 C10orf126Q8N4M7 172 aa16.61■□□□□ 0.25
HOXC9-201ENST00000303450 KRTAP1-5Q9BYS1 174 aa16.61■□□□□ 0.25
HOXC9-201ENST00000303450 MAP1LC3AQ9H492 121 aa16.61■□□□□ 0.25
HOXC9-201ENST00000303450 Q8N3U1 123 aa16.6■□□□□ 0.25
HOXC9-201ENST00000303450 UBE2L6O14933 153 aa16.6■□□□□ 0.25
HOXC9-201ENST00000303450 ATP6V1G1O75348 118 aa16.6■□□□□ 0.25
HOXC9-201ENST00000303450 CHCHD7Q9BUK0 85 aa16.6■□□□□ 0.25
HOXC9-201ENST00000303450 LOC389332A0A1B0GUA5 103 aa16.59■□□□□ 0.25
HOXC9-201ENST00000303450 S100A1P23297 94 aa16.59■□□□□ 0.25
HOXC9-201ENST00000303450 SCO1O75880 301 aa16.58■□□□□ 0.24
HOXC9-201ENST00000303450 RYR3Q15413 4870 aa16.57■□□□□ 0.24
HOXC9-201ENST00000303450 PRSS47A8MTI9 375 aa16.57■□□□□ 0.24
HOXC9-201ENST00000303450 TCAPO15273 167 aa16.57■□□□□ 0.24
HOXC9-201ENST00000303450 MPV17L2Q567V2 206 aa16.57■□□□□ 0.24
HOXC9-201ENST00000303450 ALKBH7Q9BT30 221 aaPredicted RBP16.56■□□□□ 0.24
HOXC9-201ENST00000303450 IGKV2D-29A0A075B6S2 120 aaPredicted RBP16.55■□□□□ 0.24
HOXC9-201ENST00000303450 IGKV2-29A2NJV5 120 aaPredicted RBP16.55■□□□□ 0.24
HOXC9-201ENST00000303450 ESDP10768 282 aa16.55■□□□□ 0.24
HOXC9-201ENST00000303450 RAB5AP20339 215 aa16.55■□□□□ 0.24
HOXC9-201ENST00000303450 C1orf134Q5TEV5 83 aa16.55■□□□□ 0.24
HOXC9-201ENST00000303450 H7C423 109 aa16.54■□□□□ 0.24
HOXC9-201ENST00000303450 RBX1P62877 108 aa16.54■□□□□ 0.24
HOXC9-201ENST00000303450 C6orf223Q8N319 242 aa16.54■□□□□ 0.24
HOXC9-201ENST00000303450 Q8N976 141 aa16.54■□□□□ 0.24
HOXC9-201ENST00000303450 IBA57-AS1B1ANH7 110 aa16.53■□□□□ 0.24
HOXC9-201ENST00000303450 Q8N8P6 123 aa16.53■□□□□ 0.24
HOXC9-201ENST00000303450 KLK12Q9UKR0 248 aa16.53■□□□□ 0.24
HOXC9-201ENST00000303450 COLCA2A8K830 154 aa16.52■□□□□ 0.24
HOXC9-201ENST00000303450 AMMECR1LQ6DCA0 310 aa16.52■□□□□ 0.24
HOXC9-201ENST00000303450 NXT2Q9NPJ8 142 aaKnown RBP16.52■□□□□ 0.24
HOXC9-201ENST00000303450 A0A1B0GUV1 79 aa16.51■□□□□ 0.23
HOXC9-201ENST00000303450 ANGP03950 147 aaKnown RBP16.51■□□□□ 0.23
HOXC9-201ENST00000303450 BTF3P20290 206 aaKnown RBP16.51■□□□□ 0.23
HOXC9-201ENST00000303450 IFI27P40305 119 aaPredicted RBP16.5■□□□□ 0.23
HOXC9-201ENST00000303450 LAGE3Q14657 143 aa16.5■□□□□ 0.23
HOXC9-201ENST00000303450 RNASEKQ6P5S7 137 aaKnown RBP16.5■□□□□ 0.23
HOXC9-201ENST00000303450 FGF6P10767 208 aa16.5■□□□□ 0.23
HOXC9-201ENST00000303450 PRSS3P2Q8NHM4 247 aa16.49■□□□□ 0.23
HOXC9-201ENST00000303450 TMEM18Q96B42 140 aa16.49■□□□□ 0.23
HOXC9-201ENST00000303450 Q9HAA7 133 aa16.48■□□□□ 0.23
HOXC9-201ENST00000303450 IGLV4-60A0A075B6I1 120 aa16.47■□□□□ 0.23
HOXC9-201ENST00000303450 TRAV8-3A0A0A6YYJ7 113 aa16.47■□□□□ 0.23
HOXC9-201ENST00000303450 NFE4Q86UQ8 179 aa16.47■□□□□ 0.23
HOXC9-201ENST00000303450 C20orf203Q8NBC4 194 aa16.47■□□□□ 0.23
HOXC9-201ENST00000303450 UBE2WQ96B02 151 aa16.47■□□□□ 0.23
HOXC9-201ENST00000303450 K7EMI3 77 aa16.46■□□□□ 0.23
HOXC9-201ENST00000303450 CRPP02741 224 aa16.46■□□□□ 0.23
HOXC9-201ENST00000303450 ZNF25P17030 456 aaPredicted RBP16.46■□□□□ 0.23
HOXC9-201ENST00000303450 TMEM101Q96IK0 257 aa16.46■□□□□ 0.23
HOXC9-201ENST00000303450 SMAGPQ0VAQ4 97 aa16.45■□□□□ 0.22
HOXC9-201ENST00000303450 ORMDL2Q53FV1 153 aa16.45■□□□□ 0.22
HOXC9-201ENST00000303450 TRGC2P03986 189 aa16.45■□□□□ 0.22
HOXC9-201ENST00000303450 LINC00269Q8N2A0 174 aa16.45■□□□□ 0.22
HOXC9-201ENST00000303450 RTL8CO15255 209 aa16.44■□□□□ 0.22
HOXC9-201ENST00000303450 Q0VG73 95 aa16.44■□□□□ 0.22
HOXC9-201ENST00000303450 DGAT2L7PQ6IED9 249 aa16.44■□□□□ 0.22
HOXC9-201ENST00000303450 MRPL52Q86TS9 123 aaKnown RBP16.44■□□□□ 0.22
HOXC9-201ENST00000303450 OR5A1Q8NGJ0 315 aa16.44■□□□□ 0.22
HOXC9-201ENST00000303450 C18orf32Q8TCD1 76 aa16.44■□□□□ 0.22
HOXC9-201ENST00000303450 RPL39P62891 51 aaKnown RBP16.43■□□□□ 0.22
HOXC9-201ENST00000303450 DNAH2Q9P225 4427 aa16.43■□□□□ 0.22
HOXC9-201ENST00000303450 CLPSL2Q6UWE3 100 aa16.42■□□□□ 0.22
HOXC9-201ENST00000303450 ENHOQ6UWT2 76 aa16.42■□□□□ 0.22
HOXC9-201ENST00000303450 FA2HQ7L5A8 372 aa16.42■□□□□ 0.22
HOXC9-201ENST00000303450 UBE2D4Q9Y2X8 147 aa16.42■□□□□ 0.22
HOXC9-201ENST00000303450 FRAS1Q86XX4 4008 aa16.41■□□□□ 0.22
HOXC9-201ENST00000303450 REG3AQ06141 175 aa16.41■□□□□ 0.22
HOXC9-201ENST00000303450 PRR34Q9NV39 138 aa16.41■□□□□ 0.22
HOXC9-201ENST00000303450 Q6ZRN7 208 aaPredicted RBP16.4■□□□□ 0.22
HOXC9-201ENST00000303450 RMI2Q96E14 147 aa16.4■□□□□ 0.22
HOXC9-201ENST00000303450 TIMM21Q9BVV7 248 aa16.4■□□□□ 0.22
HOXC9-201ENST00000303450 CSDC2Q9Y534 153 aaKnown RBP16.4■□□□□ 0.22
HOXC9-201ENST00000303450 MIAQ16674 131 aa16.39■□□□□ 0.21
HOXC9-201ENST00000303450 TM2D2Q9BX73 214 aa16.39■□□□□ 0.21
HOXC9-201ENST00000303450 CYSLTR1Q9Y271 337 aa16.39■□□□□ 0.21
HOXC9-201ENST00000303450 IGKV2D-24A0A075B6R9 120 aa16.38■□□□□ 0.21
HOXC9-201ENST00000303450 G0S2P27469 103 aa16.38■□□□□ 0.21
HOXC9-201ENST00000303450 C2orf66Q6UXQ4 117 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms