RNA–Protein interactions for RNA: ENST00000301280.9

CHAF1A-201, Transcript of chromatin assembly factor 1 subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHAF1A, Length 3,339 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-201ENST00000301280 HIVEP1P15822 2718 aa11.47□□□□□ -0.57
CHAF1A-201ENST00000301280 ELANEP08246 267 aa11.47□□□□□ -0.57
CHAF1A-201ENST00000301280 C20orf78Q9BR46 151 aa11.47□□□□□ -0.57
CHAF1A-201ENST00000301280 OTOGQ6ZRI0 2925 aa11.47□□□□□ -0.57
CHAF1A-201ENST00000301280 TRAV13-1A0A0B4J241 112 aa11.46□□□□□ -0.57
CHAF1A-201ENST00000301280 RBMY1BA6NDE4 496 aaKnown RBP11.46□□□□□ -0.57
CHAF1A-201ENST00000301280 RBMY1EA6NEQ0 496 aaKnown RBP11.46□□□□□ -0.57
CHAF1A-201ENST00000301280 K7EMT4 169 aa11.46□□□□□ -0.57
CHAF1A-201ENST00000301280 TSHBP01222 138 aa11.46□□□□□ -0.57
CHAF1A-201ENST00000301280 RBMY1DP0C7P1 496 aaKnown RBP11.46□□□□□ -0.57
CHAF1A-201ENST00000301280 PMVKQ15126 192 aa11.46□□□□□ -0.57
CHAF1A-201ENST00000301280 SAMD13Q5VXD3 122 aa11.46□□□□□ -0.57
CHAF1A-201ENST00000301280 Q6ZSV7 163 aa11.46□□□□□ -0.57
CHAF1A-201ENST00000301280 PRO0461Q9UI25 63 aa11.46□□□□□ -0.57
CHAF1A-201ENST00000301280 A0A096LPF7 62 aa11.46□□□□□ -0.58
CHAF1A-201ENST00000301280 NDUFA7O95182 113 aa11.46□□□□□ -0.58
CHAF1A-201ENST00000301280 ZNRF2Q8NHG8 242 aa11.46□□□□□ -0.58
CHAF1A-201ENST00000301280 TENM1Q9UKZ4 2725 aa11.46□□□□□ -0.58
CHAF1A-201ENST00000301280 DNAJC9-AS1A6NH13 148 aa11.45□□□□□ -0.58
CHAF1A-201ENST00000301280 LINC00315P59091 139 aa11.45□□□□□ -0.58
CHAF1A-201ENST00000301280 STAB1Q9NY15 2570 aa11.45□□□□□ -0.58
CHAF1A-201ENST00000301280 TRBV7-3A0A075B6L6 115 aa11.45□□□□□ -0.58
CHAF1A-201ENST00000301280 A0A096LNT2 108 aa11.45□□□□□ -0.58
CHAF1A-201ENST00000301280 A0A1B0GWB2 263 aa11.45□□□□□ -0.58
CHAF1A-201ENST00000301280 GAGE12JA6NER3 117 aa11.45□□□□□ -0.58
CHAF1A-201ENST00000301280 M0QY20 66 aa11.45□□□□□ -0.58
CHAF1A-201ENST00000301280 SPINK8P0C7L1 97 aa11.45□□□□□ -0.58
CHAF1A-201ENST00000301280 TSPEAR-AS2P59090 65 aa11.45□□□□□ -0.58
CHAF1A-201ENST00000301280 GAGE4Q13068 117 aa11.45□□□□□ -0.58
CHAF1A-201ENST00000301280 GAGE5Q13069 117 aa11.45□□□□□ -0.58
CHAF1A-201ENST00000301280 GAGE13Q4V321 117 aa11.45□□□□□ -0.58
CHAF1A-201ENST00000301280 RNF152Q8N8N0 203 aa11.45□□□□□ -0.58
CHAF1A-201ENST00000301280 PTH2Q96A98 100 aa11.45□□□□□ -0.58
CHAF1A-201ENST00000301280 ESM1Q9NQ30 184 aa11.45□□□□□ -0.58
CHAF1A-201ENST00000301280 H3BMM0 161 aa11.44□□□□□ -0.58
CHAF1A-201ENST00000301280 RPL32P62910 135 aaKnown RBP11.44□□□□□ -0.58
CHAF1A-201ENST00000301280 PEMTQ9UBM1 199 aa11.44□□□□□ -0.58
CHAF1A-201ENST00000301280 TRAV12-1A0A0B4J245 112 aa11.44□□□□□ -0.58
CHAF1A-201ENST00000301280 TMEM89A2RUT3 159 aa11.44□□□□□ -0.58
CHAF1A-201ENST00000301280 TRGV2A0A075B6R0 118 aa11.43□□□□□ -0.58
CHAF1A-201ENST00000301280 MORN3Q6PF18 240 aaPredicted RBP11.43□□□□□ -0.58
CHAF1A-201ENST00000301280 MAP6D1Q9H9H5 199 aa11.43□□□□□ -0.58
CHAF1A-201ENST00000301280 GAGE12HA6NDE8 117 aa11.43□□□□□ -0.58
CHAF1A-201ENST00000301280 GAGE7O76087 117 aa11.43□□□□□ -0.58
CHAF1A-201ENST00000301280 GAGE12FP0CL80 117 aa11.43□□□□□ -0.58
CHAF1A-201ENST00000301280 GAGE12GP0CL81 117 aa11.43□□□□□ -0.58
CHAF1A-201ENST00000301280 GAGE12IP0CL82 117 aa11.43□□□□□ -0.58
CHAF1A-201ENST00000301280 DEFB130BP0DP73 79 aa11.43□□□□□ -0.58
CHAF1A-201ENST00000301280 DEFB130AP0DP74 79 aa11.43□□□□□ -0.58
CHAF1A-201ENST00000301280 CCL24O00175 119 aa11.43□□□□□ -0.58
CHAF1A-201ENST00000301280 DEFB4AO15263 64 aa11.43□□□□□ -0.58
CHAF1A-201ENST00000301280 CIDEAO60543 219 aa11.43□□□□□ -0.58
CHAF1A-201ENST00000301280 NOP10Q9NPE3 64 aaKnown RBP11.43□□□□□ -0.58
CHAF1A-201ENST00000301280 KIF25-AS1Q9Y6Z4 181 aa11.43□□□□□ -0.58
CHAF1A-201ENST00000301280 TRGV11A0A075B6L2 103 aa11.42□□□□□ -0.58
CHAF1A-201ENST00000301280 ODF3Q96PU9 254 aa11.42□□□□□ -0.58
CHAF1A-201ENST00000301280 POLR2KP53803 58 aaKnown RBP11.42□□□□□ -0.58
CHAF1A-201ENST00000301280 TRPT1Q86TN4 253 aaKnown RBP11.42□□□□□ -0.58
CHAF1A-201ENST00000301280 C11orf68Q9H3H3 251 aaKnown RBP11.42□□□□□ -0.58
CHAF1A-201ENST00000301280 J3QQQ9 107 aa11.41□□□□□ -0.58
CHAF1A-201ENST00000301280 GEMIN7Q9H840 131 aaKnown RBP11.41□□□□□ -0.58
CHAF1A-201ENST00000301280 F8W1H4 67 aa11.41□□□□□ -0.58
CHAF1A-201ENST00000301280 I3L3M4 83 aa11.41□□□□□ -0.58
CHAF1A-201ENST00000301280 J3QLI3 93 aa11.41□□□□□ -0.58
CHAF1A-201ENST00000301280 PPP1R17O96001 155 aa11.41□□□□□ -0.58
CHAF1A-201ENST00000301280 SMCPP49901 116 aaPredicted RBP11.41□□□□□ -0.58
CHAF1A-201ENST00000301280 Q6ZTI0 123 aa11.41□□□□□ -0.58
CHAF1A-201ENST00000301280 TOMM7Q9P0U1 55 aa11.41□□□□□ -0.58
CHAF1A-201ENST00000301280 CR1P17927 2039 aa11.4□□□□□ -0.58
CHAF1A-201ENST00000301280 RRN3P1Q2M238 152 aa11.4□□□□□ -0.58
CHAF1A-201ENST00000301280 SIGMAR1Q99720 223 aa11.4□□□□□ -0.58
CHAF1A-201ENST00000301280 PDZD2O15018 2839 aa11.39□□□□□ -0.59
CHAF1A-201ENST00000301280 DEFB114Q30KQ6 69 aa11.39□□□□□ -0.59
CHAF1A-201ENST00000301280 FSHBP01225 129 aa11.38□□□□□ -0.59
CHAF1A-201ENST00000301280 FHL3Q13643 280 aa11.38□□□□□ -0.59
CHAF1A-201ENST00000301280 IGLV4-69A0A075B6H9 119 aa11.38□□□□□ -0.59
CHAF1A-201ENST00000301280 NFE4Q86UQ8 179 aa11.38□□□□□ -0.59
CHAF1A-201ENST00000301280 SPATA25Q9BR10 227 aa11.38□□□□□ -0.59
CHAF1A-201ENST00000301280 IGIPA6NJ69 53 aa11.37□□□□□ -0.59
CHAF1A-201ENST00000301280 ZNF415Q09FC8 603 aa11.37□□□□□ -0.59
CHAF1A-201ENST00000301280 LOC100131303A0A0U1RQF7 123 aa11.37□□□□□ -0.59
CHAF1A-201ENST00000301280 Q6ZUT4 128 aa11.37□□□□□ -0.59
CHAF1A-201ENST00000301280 AKAP9Q99996 3911 aa11.37□□□□□ -0.59
CHAF1A-201ENST00000301280 INSP01308 110 aa11.37□□□□□ -0.59
CHAF1A-201ENST00000301280 CFAP161Q6P656 301 aa11.37□□□□□ -0.59
CHAF1A-201ENST00000301280 C20orf203Q8NBC4 194 aa11.37□□□□□ -0.59
CHAF1A-201ENST00000301280 C9orf85Q96MD7 179 aa11.37□□□□□ -0.59
CHAF1A-201ENST00000301280 ODF3L2Q3SX64 289 aa11.36□□□□□ -0.59
CHAF1A-201ENST00000301280 CLPSL2Q6UWE3 100 aa11.36□□□□□ -0.59
CHAF1A-201ENST00000301280 LINC00467Q9BRT7 94 aa11.36□□□□□ -0.59
CHAF1A-201ENST00000301280 MGAM2Q2M2H8 2515 aa11.36□□□□□ -0.59
CHAF1A-201ENST00000301280 TAL2Q16559 108 aa11.36□□□□□ -0.59
CHAF1A-201ENST00000301280 PF4P02776 101 aa11.35□□□□□ -0.59
CHAF1A-201ENST00000301280 A4D1N5 150 aa11.35□□□□□ -0.59
CHAF1A-201ENST00000301280 M0R2P5 195 aa11.35□□□□□ -0.59
CHAF1A-201ENST00000301280 HTN3P15516 51 aa11.35□□□□□ -0.59
CHAF1A-201ENST00000301280 TIMM21Q9BVV7 248 aa11.35□□□□□ -0.59
CHAF1A-201ENST00000301280 IGLV4-3A0A075B6K6 122 aa11.34□□□□□ -0.59
CHAF1A-201ENST00000301280 A0A1B0GV72 72 aa11.34□□□□□ -0.59
CHAF1A-201ENST00000301280 MUSTN1Q8IVN3 82 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms