RNA–Protein interactions for RNA: ENST00000299596.8

TMEM41B-201, Transcript of transmembrane protein 41B, humanhuman

TSL 1 (best)

Gene TMEM41B, Length 1,443 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41B-201ENST00000299596 DEFB104AQ8WTQ1 72 aa9.01□□□□□ -0.97
TMEM41B-201ENST00000299596 RNASE7Q9H1E1 156 aaKnown RBP9.01□□□□□ -0.97
TMEM41B-201ENST00000299596 TMEM250H0YL14 139 aa9□□□□□ -0.97
TMEM41B-201ENST00000299596 K7EN84 100 aa9□□□□□ -0.97
TMEM41B-201ENST00000299596 C20orf203Q8NBC4 194 aa9□□□□□ -0.97
TMEM41B-201ENST00000299596 CLRN3Q8NCR9 226 aa9□□□□□ -0.97
TMEM41B-201ENST00000299596 UBE2L6O14933 153 aa8.99□□□□□ -0.97
TMEM41B-201ENST00000299596 COTL1Q14019 142 aa8.99□□□□□ -0.97
TMEM41B-201ENST00000299596 SMIM15Q7Z3B0 74 aa8.99□□□□□ -0.97
TMEM41B-201ENST00000299596 C9orf163Q8N9P6 203 aa8.99□□□□□ -0.97
TMEM41B-201ENST00000299596 IGLV10-54A0A075B6I4 117 aa8.98□□□□□ -0.97
TMEM41B-201ENST00000299596 J3QL48 77 aa8.98□□□□□ -0.97
TMEM41B-201ENST00000299596 IGLV4-60A0A075B6I1 120 aa8.97□□□□□ -0.97
TMEM41B-201ENST00000299596 GATCO43716 136 aaKnown RBP8.97□□□□□ -0.97
TMEM41B-201ENST00000299596 AMTP48728 403 aa8.97□□□□□ -0.97
TMEM41B-201ENST00000299596 TEX261Q6UWH6 196 aa8.97□□□□□ -0.97
TMEM41B-201ENST00000299596 ALKAL2Q6UX46 152 aa8.97□□□□□ -0.97
TMEM41B-201ENST00000299596 FAM231DQ6ZW35 169 aa8.97□□□□□ -0.97
TMEM41B-201ENST00000299596 GATD1Q8NB37 220 aa8.97□□□□□ -0.97
TMEM41B-201ENST00000299596 LYPD6BQ8NI32 183 aa8.97□□□□□ -0.97
TMEM41B-201ENST00000299596 GTSF1Q8WW33 167 aa8.97□□□□□ -0.97
TMEM41B-201ENST00000299596 A8MWL6 223 aa8.97□□□□□ -0.97
TMEM41B-201ENST00000299596 TRAV26-2A0A0B4J265 109 aa8.96□□□□□ -0.98
TMEM41B-201ENST00000299596 KRTAP29-1A8MX34 341 aaPredicted RBP8.96□□□□□ -0.98
TMEM41B-201ENST00000299596 GFRA4Q9GZZ7 299 aa8.96□□□□□ -0.98
TMEM41B-201ENST00000299596 NCR2O95944 276 aa8.95□□□□□ -0.98
TMEM41B-201ENST00000299596 FOXA3P55318 350 aaPredicted RBP8.95□□□□□ -0.98
TMEM41B-201ENST00000299596 CNBPP62633 177 aaKnown RBP8.95□□□□□ -0.98
TMEM41B-201ENST00000299596 CT83Q5H943 113 aa8.95□□□□□ -0.98
TMEM41B-201ENST00000299596 hCG_2014768A0A024R1R8 64 aa8.94□□□□□ -0.98
TMEM41B-201ENST00000299596 hDV102S1A0JD36 115 aa8.94□□□□□ -0.98
TMEM41B-201ENST00000299596 NDUFS6O75380 124 aaKnown RBP8.94□□□□□ -0.98
TMEM41B-201ENST00000299596 CEBPGP53567 150 aa8.94□□□□□ -0.98
TMEM41B-201ENST00000299596 KRTAP10-4P60372 401 aaPredicted RBP8.94□□□□□ -0.98
TMEM41B-201ENST00000299596 SDIM1Q6ZPB5 146 aa8.94□□□□□ -0.98
TMEM41B-201ENST00000299596 RPL39LQ96EH5 51 aaKnown RBP8.94□□□□□ -0.98
TMEM41B-201ENST00000299596 EIF5A2Q9GZV4 153 aaKnown RBP8.94□□□□□ -0.98
TMEM41B-201ENST00000299596 AP5S1Q9NUS5 200 aa8.94□□□□□ -0.98
TMEM41B-201ENST00000299596 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.93□□□□□ -0.98
TMEM41B-201ENST00000299596 H7C423 109 aa8.93□□□□□ -0.98
TMEM41B-201ENST00000299596 BORCS7Q96B45 105 aa8.93□□□□□ -0.98
TMEM41B-201ENST00000299596 SDHAF1A6NFY7 115 aa8.92□□□□□ -0.98
TMEM41B-201ENST00000299596 AMMECR1LQ6DCA0 310 aa8.92□□□□□ -0.98
TMEM41B-201ENST00000299596 CFAP161Q6P656 301 aa8.92□□□□□ -0.98
TMEM41B-201ENST00000299596 SMIM7Q9BQ49 75 aa8.92□□□□□ -0.98
TMEM41B-201ENST00000299596 LRP1Q07954 4544 aaKnown RBP8.91□□□□□ -0.98
TMEM41B-201ENST00000299596 APCSP02743 223 aa8.91□□□□□ -0.98
TMEM41B-201ENST00000299596 FAM210AQ96ND0 272 aa8.91□□□□□ -0.98
TMEM41B-201ENST00000299596 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.91□□□□□ -0.98
TMEM41B-201ENST00000299596 IGHV3-64A0A075B6Q5 118 aa8.9□□□□□ -0.98
TMEM41B-201ENST00000299596 TRBV6-5A0A0K0K1A5 114 aa8.9□□□□□ -0.98
TMEM41B-201ENST00000299596 FAM231BA6NCW3 169 aa8.9□□□□□ -0.98
TMEM41B-201ENST00000299596 I3L3M4 83 aa8.9□□□□□ -0.98
TMEM41B-201ENST00000299596 RPL37AP61513 92 aaKnown RBP8.9□□□□□ -0.98
TMEM41B-201ENST00000299596 RNASEKQ6P5S7 137 aaKnown RBP8.9□□□□□ -0.98
TMEM41B-201ENST00000299596 LINC01551Q86U37 167 aa8.9□□□□□ -0.98
TMEM41B-201ENST00000299596 TSKUQ8WUA8 353 aa8.9□□□□□ -0.98
TMEM41B-201ENST00000299596 FAT3Q8TDW7 4589 aa8.89□□□□□ -0.99
TMEM41B-201ENST00000299596 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.89□□□□□ -0.99
TMEM41B-201ENST00000299596 IGKV3OR2-268A0A0C4DH90 116 aa8.89□□□□□ -0.99
TMEM41B-201ENST00000299596 A0A1B0GUT8 65 aa8.89□□□□□ -0.99
TMEM41B-201ENST00000299596 IGKV2-29A2NJV5 120 aaPredicted RBP8.89□□□□□ -0.99
TMEM41B-201ENST00000299596 GAGE12HA6NDE8 117 aa8.89□□□□□ -0.99
TMEM41B-201ENST00000299596 ZNF727A8MUV8 499 aa8.89□□□□□ -0.99
TMEM41B-201ENST00000299596 PMCHP20382 165 aa8.89□□□□□ -0.99
TMEM41B-201ENST00000299596 OSTCQ9NRP0 149 aa8.89□□□□□ -0.99
TMEM41B-201ENST00000299596 HIGD1CA8MV81 97 aa8.88□□□□□ -0.99
TMEM41B-201ENST00000299596 OXTP01178 125 aa8.88□□□□□ -0.99
TMEM41B-201ENST00000299596 SLPIP03973 132 aa8.88□□□□□ -0.99
TMEM41B-201ENST00000299596 FGF6P10767 208 aa8.88□□□□□ -0.99
TMEM41B-201ENST00000299596 ZNF25P17030 456 aaPredicted RBP8.88□□□□□ -0.99
TMEM41B-201ENST00000299596 CIRBPQ14011 172 aaKnown RBP8.88□□□□□ -0.99
TMEM41B-201ENST00000299596 DPH3Q96FX2 82 aa8.88□□□□□ -0.99
TMEM41B-201ENST00000299596 TMEM191AQ9H0A3 160 aa8.88□□□□□ -0.99
TMEM41B-201ENST00000299596 ST20Q9HBF5 79 aa8.88□□□□□ -0.99
TMEM41B-201ENST00000299596 PANO1I0J062 215 aa8.88□□□□□ -0.99
TMEM41B-201ENST00000299596 SRP19P09132 144 aaKnown RBP8.88□□□□□ -0.99
TMEM41B-201ENST00000299596 CHCHD10Q8WYQ3 142 aaPredicted RBP8.88□□□□□ -0.99
TMEM41B-201ENST00000299596 TMEM101Q96IK0 257 aa8.88□□□□□ -0.99
TMEM41B-201ENST00000299596 BTF3L4Q96K17 158 aa8.88□□□□□ -0.99
TMEM41B-201ENST00000299596 C15orf56Q8N910 161 aa8.87□□□□□ -0.99
TMEM41B-201ENST00000299596 MRAP2Q96G30 205 aa8.87□□□□□ -0.99
TMEM41B-201ENST00000299596 RNF185Q96GF1 192 aa8.87□□□□□ -0.99
TMEM41B-201ENST00000299596 ESDP10768 282 aa8.86□□□□□ -0.99
TMEM41B-201ENST00000299596 RAB4AP20338 218 aa8.86□□□□□ -0.99
TMEM41B-201ENST00000299596 RPS10P46783 165 aaKnown RBP8.86□□□□□ -0.99
TMEM41B-201ENST00000299596 OR5A1Q8NGJ0 315 aa8.86□□□□□ -0.99
TMEM41B-201ENST00000299596 GAS8-AS1O95177 125 aa8.85□□□□□ -0.99
TMEM41B-201ENST00000299596 TSHBP01222 138 aa8.85□□□□□ -0.99
TMEM41B-201ENST00000299596 POLR2KP53803 58 aaKnown RBP8.85□□□□□ -0.99
TMEM41B-201ENST00000299596 RIGQ13278 110 aa8.85□□□□□ -0.99
TMEM41B-201ENST00000299596 TMEM241Q24JQ0 296 aa8.85□□□□□ -0.99
TMEM41B-201ENST00000299596 FAM74A3Q4VXF1 159 aa8.85□□□□□ -0.99
TMEM41B-201ENST00000299596 TRBV27A0A0K0K1C4 114 aa8.84□□□□□ -0.99
TMEM41B-201ENST00000299596 TMEM242Q9NWH2 141 aa8.84□□□□□ -0.99
TMEM41B-201ENST00000299596 V9GYV3 84 aa8.84□□□□□ -0.99
TMEM41B-201ENST00000299596 PKHD1L1Q86WI1 4243 aa8.83□□□□□ -1
TMEM41B-201ENST00000299596 A0A087WYN8 130 aa8.83□□□□□ -1
TMEM41B-201ENST00000299596 GVQW2A0A096LPI5 108 aaPredicted RBP8.83□□□□□ -1
TMEM41B-201ENST00000299596 PPP1R17O96001 155 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms