RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 PSMB2P49721 201 aa9.94□□□□□ -0.82
CDH8-201ENST00000299345 TSPEAR-AS2P59090 65 aa9.94□□□□□ -0.82
CDH8-201ENST00000299345 CFAP126Q5VTH2 177 aa9.94□□□□□ -0.82
CDH8-201ENST00000299345 TIMM21Q9BVV7 248 aa9.94□□□□□ -0.82
CDH8-201ENST00000299345 A0A1B0GWB2 263 aa9.94□□□□□ -0.82
CDH8-201ENST00000299345 ZNF22P17026 224 aaPredicted RBP9.94□□□□□ -0.82
CDH8-201ENST00000299345 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.93□□□□□ -0.82
CDH8-201ENST00000299345 IGKV2-29A2NJV5 120 aaPredicted RBP9.93□□□□□ -0.82
CDH8-201ENST00000299345 WFDC2Q14508 124 aa9.93□□□□□ -0.82
CDH8-201ENST00000299345 Q1RN00 199 aa9.93□□□□□ -0.82
CDH8-201ENST00000299345 FBN2P35556 2912 aa9.93□□□□□ -0.82
CDH8-201ENST00000299345 TRAV25A0A0B4J276 109 aa9.93□□□□□ -0.82
CDH8-201ENST00000299345 TEX48A0A1B0GUV7 120 aa9.93□□□□□ -0.82
CDH8-201ENST00000299345 TMEM223A0PJW6 202 aa9.93□□□□□ -0.82
CDH8-201ENST00000299345 H7C2G1 150 aa9.93□□□□□ -0.82
CDH8-201ENST00000299345 SLC25A29Q8N8R3 303 aa9.93□□□□□ -0.82
CDH8-201ENST00000299345 MXRA5Q9NR99 2828 aa9.93□□□□□ -0.82
CDH8-201ENST00000299345 ETDBQ3ZM63 59 aa9.93□□□□□ -0.82
CDH8-201ENST00000299345 CR1P17927 2039 aa9.92□□□□□ -0.82
CDH8-201ENST00000299345 TMEM238C9JI98 176 aa9.92□□□□□ -0.82
CDH8-201ENST00000299345 IGHV3-53P01767 116 aa9.92□□□□□ -0.82
CDH8-201ENST00000299345 AZU1P20160 251 aa9.92□□□□□ -0.82
CDH8-201ENST00000299345 CITED2Q99967 270 aaPredicted RBP9.92□□□□□ -0.82
CDH8-201ENST00000299345 ODF3L2Q3SX64 289 aa9.92□□□□□ -0.82
CDH8-201ENST00000299345 G3V4G9 280 aa9.92□□□□□ -0.82
CDH8-201ENST00000299345 PYGO1Q9Y3Y4 419 aa9.92□□□□□ -0.82
CDH8-201ENST00000299345 ADARB2-AS1A8MUL3 147 aa9.91□□□□□ -0.82
CDH8-201ENST00000299345 PIK3CD-AS1Q5SR53 167 aa9.91□□□□□ -0.82
CDH8-201ENST00000299345 SPANXA1Q9NS26 97 aa9.91□□□□□ -0.82
CDH8-201ENST00000299345 A8MTW9 85 aa9.91□□□□□ -0.82
CDH8-201ENST00000299345 Q6ZSN1 163 aa9.91□□□□□ -0.82
CDH8-201ENST00000299345 DNAJC30Q96LL9 226 aa9.91□□□□□ -0.82
CDH8-201ENST00000299345 ZFHX3Q15911 3703 aa9.91□□□□□ -0.82
CDH8-201ENST00000299345 ZNF418Q8TF45 676 aaPredicted RBP9.91□□□□□ -0.82
CDH8-201ENST00000299345 SPANXB1Q9NS25 103 aaPredicted RBP9.91□□□□□ -0.82
CDH8-201ENST00000299345 TSSC4Q9Y5U2 329 aaPredicted RBP9.91□□□□□ -0.82
CDH8-201ENST00000299345 FLNAP21333 2647 aaKnown RBP9.9□□□□□ -0.82
CDH8-201ENST00000299345 NDUFA11Q86Y39 141 aa9.9□□□□□ -0.82
CDH8-201ENST00000299345 Q9UF83 564 aa9.9□□□□□ -0.82
CDH8-201ENST00000299345 ITPR3Q14573 2671 aa9.9□□□□□ -0.83
CDH8-201ENST00000299345 UBE2D1P51668 147 aa9.9□□□□□ -0.83
CDH8-201ENST00000299345 RPL36AP83881 106 aaKnown RBP9.9□□□□□ -0.83
CDH8-201ENST00000299345 SH2D6Q7Z4S9 175 aa9.9□□□□□ -0.83
CDH8-201ENST00000299345 KRTAP1-3Q8IUG1 177 aa9.9□□□□□ -0.83
CDH8-201ENST00000299345 RPL36ALQ969Q0 106 aaKnown RBP9.9□□□□□ -0.83
CDH8-201ENST00000299345 PRO1854Q9UHT4 67 aa9.9□□□□□ -0.83
CDH8-201ENST00000299345 TSPAN13O95857 204 aa9.89□□□□□ -0.83
CDH8-201ENST00000299345 IGHV3-30P01768 117 aa9.89□□□□□ -0.83
CDH8-201ENST00000299345 IGHV3-30-3P0DP02 117 aa9.89□□□□□ -0.83
CDH8-201ENST00000299345 IGHV3-30-5P0DP03 117 aa9.89□□□□□ -0.83
CDH8-201ENST00000299345 TRAV8-3A0A0A6YYJ7 113 aa9.89□□□□□ -0.83
CDH8-201ENST00000299345 A4D1N5 150 aa9.89□□□□□ -0.83
CDH8-201ENST00000299345 RPL35AP18077 110 aaKnown RBP9.89□□□□□ -0.83
CDH8-201ENST00000299345 C11orf72Q8NBR9 251 aa9.89□□□□□ -0.83
CDH8-201ENST00000299345 UBR5O95071 2799 aaPredicted RBP9.88□□□□□ -0.83
CDH8-201ENST00000299345 CSMD2Q7Z408 3487 aa9.88□□□□□ -0.83
CDH8-201ENST00000299345 CMC4P56277 68 aaPredicted RBP9.88□□□□□ -0.83
CDH8-201ENST00000299345 LINC00467Q9BRT7 94 aa9.88□□□□□ -0.83
CDH8-201ENST00000299345 EDA2RQ9HAV5 297 aa9.88□□□□□ -0.83
CDH8-201ENST00000299345 ESM1Q9NQ30 184 aa9.88□□□□□ -0.83
CDH8-201ENST00000299345 TRGV2A0A075B6R0 118 aa9.88□□□□□ -0.83
CDH8-201ENST00000299345 CRYBA4P53673 196 aa9.88□□□□□ -0.83
CDH8-201ENST00000299345 NDUFA12Q9UI09 145 aa9.88□□□□□ -0.83
CDH8-201ENST00000299345 RS1O15537 224 aa9.87□□□□□ -0.83
CDH8-201ENST00000299345 C10orf126Q8N4M7 172 aa9.87□□□□□ -0.83
CDH8-201ENST00000299345 JMJD1CQ15652 2540 aa9.87□□□□□ -0.83
CDH8-201ENST00000299345 SPINK8P0C7L1 97 aa9.87□□□□□ -0.83
CDH8-201ENST00000299345 Q6ZUT4 128 aa9.87□□□□□ -0.83
CDH8-201ENST00000299345 ERG28Q9UKR5 140 aa9.87□□□□□ -0.83
CDH8-201ENST00000299345 CFC1BP0CG36 223 aa9.87□□□□□ -0.83
CDH8-201ENST00000299345 CFC1P0CG37 223 aa9.87□□□□□ -0.83
CDH8-201ENST00000299345 MUSTN1Q8IVN3 82 aa9.87□□□□□ -0.83
CDH8-201ENST00000299345 LINC01006Q8NI28 216 aa9.86□□□□□ -0.83
CDH8-201ENST00000299345 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.86□□□□□ -0.83
CDH8-201ENST00000299345 MRPS36P82909 103 aaKnown RBP9.86□□□□□ -0.83
CDH8-201ENST00000299345 BEAN1Q3B7T3 259 aa9.86□□□□□ -0.83
CDH8-201ENST00000299345 PTH2Q96A98 100 aa9.86□□□□□ -0.83
CDH8-201ENST00000299345 AMELXQ99217 191 aa9.86□□□□□ -0.83
CDH8-201ENST00000299345 UBE2D4Q9Y2X8 147 aa9.86□□□□□ -0.83
CDH8-201ENST00000299345 CHD6Q8TD26 2715 aa9.86□□□□□ -0.83
CDH8-201ENST00000299345 C1orf158Q8N1D5 194 aa9.86□□□□□ -0.83
CDH8-201ENST00000299345 CHCHD7Q9BUK0 85 aa9.86□□□□□ -0.83
CDH8-201ENST00000299345 HIVEP2P31629 2446 aa9.86□□□□□ -0.83
CDH8-201ENST00000299345 Q6ZTI0 123 aa9.85□□□□□ -0.83
CDH8-201ENST00000299345 NOP10Q9NPE3 64 aaKnown RBP9.85□□□□□ -0.83
CDH8-201ENST00000299345 IGHV1-58A0A0C4DH39 117 aa9.85□□□□□ -0.83
CDH8-201ENST00000299345 A0A0J9YXY3 114 aa9.85□□□□□ -0.83
CDH8-201ENST00000299345 GAGE12JA6NER3 117 aa9.85□□□□□ -0.83
CDH8-201ENST00000299345 GAGE4Q13068 117 aa9.85□□□□□ -0.83
CDH8-201ENST00000299345 GAGE5Q13069 117 aa9.85□□□□□ -0.83
CDH8-201ENST00000299345 TRBV20-1A0A075B6N2 111 aa9.84□□□□□ -0.83
CDH8-201ENST00000299345 TINCRA0A1B0GVN0 87 aa9.84□□□□□ -0.83
CDH8-201ENST00000299345 UBE2L6O14933 153 aa9.84□□□□□ -0.83
CDH8-201ENST00000299345 SMAGPQ0VAQ4 97 aa9.84□□□□□ -0.83
CDH8-201ENST00000299345 TMEM263Q8WUH6 116 aaKnown RBP9.84□□□□□ -0.83
CDH8-201ENST00000299345 APCP25054 2843 aa9.84□□□□□ -0.83
CDH8-201ENST00000299345 NPC2P61916 151 aa9.84□□□□□ -0.83
CDH8-201ENST00000299345 FHL3Q13643 280 aa9.84□□□□□ -0.83
CDH8-201ENST00000299345 CLUHP3Q96NS8 147 aa9.83□□□□□ -0.84
CDH8-201ENST00000299345 TRAV13-1A0A0B4J241 112 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 240 ms