RNA–Protein interactions for RNA: ENST00000296861.2

TNFRSF21-201, Transcript of TNF receptor superfamily member 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF21, Length 3,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF21-201ENST00000296861 CFHR3Q02985 330 aa9.91□□□□□ -0.82
TNFRSF21-201ENST00000296861 TCTEX1D4Q5JR98 221 aa9.91□□□□□ -0.82
TNFRSF21-201ENST00000296861 NDUFA12Q9UI09 145 aa9.91□□□□□ -0.82
TNFRSF21-201ENST00000296861 U3KQE9 123 aa9.91□□□□□ -0.82
TNFRSF21-201ENST00000296861 NF1P21359 2839 aa9.9□□□□□ -0.82
TNFRSF21-201ENST00000296861 C2orf82Q6UX34 121 aa9.9□□□□□ -0.82
TNFRSF21-201ENST00000296861 TEX49A0A1B0GTD5 131 aa9.9□□□□□ -0.82
TNFRSF21-201ENST00000296861 SLURP1P55000 103 aa9.9□□□□□ -0.82
TNFRSF21-201ENST00000296861 TMEM262E9PQX1 116 aa9.9□□□□□ -0.83
TNFRSF21-201ENST00000296861 CARD19Q96LW7 228 aa9.9□□□□□ -0.83
TNFRSF21-201ENST00000296861 TRBV7-9A0A0J9YWB2 115 aa9.89□□□□□ -0.83
TNFRSF21-201ENST00000296861 I3L3M4 83 aa9.89□□□□□ -0.83
TNFRSF21-201ENST00000296861 COX6CP09669 75 aa9.89□□□□□ -0.83
TNFRSF21-201ENST00000296861 IGHG2P01859 326 aa9.89□□□□□ -0.83
TNFRSF21-201ENST00000296861 UBE2D1P51668 147 aa9.89□□□□□ -0.83
TNFRSF21-201ENST00000296861 USP24Q9UPU5 2620 aa9.89□□□□□ -0.83
TNFRSF21-201ENST00000296861 TEX15Q9BXT5 2789 aa9.89□□□□□ -0.83
TNFRSF21-201ENST00000296861 IGIPA6NJ69 53 aa9.89□□□□□ -0.83
TNFRSF21-201ENST00000296861 TMEM141Q96I45 108 aa9.89□□□□□ -0.83
TNFRSF21-201ENST00000296861 IGHV4OR15-8A0A075B7B6 117 aa9.88□□□□□ -0.83
TNFRSF21-201ENST00000296861 A0A087WW49 117 aa9.88□□□□□ -0.83
TNFRSF21-201ENST00000296861 POLR2KP53803 58 aaKnown RBP9.88□□□□□ -0.83
TNFRSF21-201ENST00000296861 C18orf65Q6ZTR6 163 aa9.88□□□□□ -0.83
TNFRSF21-201ENST00000296861 IGHV4-4A0A075B6R2 117 aa9.88□□□□□ -0.83
TNFRSF21-201ENST00000296861 M0R2P5 195 aa9.88□□□□□ -0.83
TNFRSF21-201ENST00000296861 RS1O15537 224 aa9.88□□□□□ -0.83
TNFRSF21-201ENST00000296861 IGHV3-30P01768 117 aa9.88□□□□□ -0.83
TNFRSF21-201ENST00000296861 IGHV3-30-5P0DP03 117 aa9.88□□□□□ -0.83
TNFRSF21-201ENST00000296861 HOXD3P31249 432 aaPredicted RBP9.88□□□□□ -0.83
TNFRSF21-201ENST00000296861 FHL3Q13643 280 aa9.88□□□□□ -0.83
TNFRSF21-201ENST00000296861 NBEAL2Q6ZNJ1 2754 aa9.87□□□□□ -0.83
TNFRSF21-201ENST00000296861 IGHV3-30-3P0DP02 117 aa9.87□□□□□ -0.83
TNFRSF21-201ENST00000296861 SLC25A29Q8N8R3 303 aa9.87□□□□□ -0.83
TNFRSF21-201ENST00000296861 ATP6V0E2Q8NHE4 81 aa9.87□□□□□ -0.83
TNFRSF21-201ENST00000296861 C11orf68Q9H3H3 251 aaKnown RBP9.87□□□□□ -0.83
TNFRSF21-201ENST00000296861 RNF223E7ERA6 249 aa9.87□□□□□ -0.83
TNFRSF21-201ENST00000296861 M0QY20 66 aa9.87□□□□□ -0.83
TNFRSF21-201ENST00000296861 RHODO00212 210 aa9.87□□□□□ -0.83
TNFRSF21-201ENST00000296861 ZNF22P17026 224 aaPredicted RBP9.87□□□□□ -0.83
TNFRSF21-201ENST00000296861 TRGV1A0A0A0MS02 117 aa9.86□□□□□ -0.83
TNFRSF21-201ENST00000296861 ELANEP08246 267 aa9.86□□□□□ -0.83
TNFRSF21-201ENST00000296861 TRAV8-4A0A0B4J246 113 aa9.86□□□□□ -0.83
TNFRSF21-201ENST00000296861 PRORYQ9H606 182 aa9.86□□□□□ -0.83
TNFRSF21-201ENST00000296861 C20orf203Q8NBC4 194 aa9.86□□□□□ -0.83
TNFRSF21-201ENST00000296861 A0A0J9YX75 114 aa9.85□□□□□ -0.83
TNFRSF21-201ENST00000296861 SOCS3O14543 225 aa9.85□□□□□ -0.83
TNFRSF21-201ENST00000296861 DCANP1Q8TF63 244 aa9.85□□□□□ -0.83
TNFRSF21-201ENST00000296861 B4DSR2 109 aa9.85□□□□□ -0.83
TNFRSF21-201ENST00000296861 UBE2D3P61077 147 aa9.85□□□□□ -0.83
TNFRSF21-201ENST00000296861 UBE2D2P62837 147 aa9.85□□□□□ -0.83
TNFRSF21-201ENST00000296861 IGLV4-3A0A075B6K6 122 aa9.84□□□□□ -0.83
TNFRSF21-201ENST00000296861 RPL13AP40429 203 aaKnown RBP9.84□□□□□ -0.83
TNFRSF21-201ENST00000296861 LINC00315P59091 139 aa9.84□□□□□ -0.83
TNFRSF21-201ENST00000296861 ATXN8Q156A1 80 aa9.84□□□□□ -0.83
TNFRSF21-201ENST00000296861 TIMM17AQ99595 171 aa9.84□□□□□ -0.83
TNFRSF21-201ENST00000296861 NDUFA7O95182 113 aa9.84□□□□□ -0.83
TNFRSF21-201ENST00000296861 COX6B1P14854 86 aa9.84□□□□□ -0.83
TNFRSF21-201ENST00000296861 MXRA5Q9NR99 2828 aa9.84□□□□□ -0.83
TNFRSF21-201ENST00000296861 A0A0J9YXY3 114 aa9.84□□□□□ -0.83
TNFRSF21-201ENST00000296861 A6NDX4 124 aa9.84□□□□□ -0.83
TNFRSF21-201ENST00000296861 IGHV3-33P01772 117 aa9.83□□□□□ -0.84
TNFRSF21-201ENST00000296861 LINC01620Q4KN68 170 aa9.83□□□□□ -0.84
TNFRSF21-201ENST00000296861 TRGV11A0A075B6L2 103 aa9.83□□□□□ -0.84
TNFRSF21-201ENST00000296861 LINC01619G3V211 115 aa9.83□□□□□ -0.84
TNFRSF21-201ENST00000296861 LEPROTO15243 131 aa9.83□□□□□ -0.84
TNFRSF21-201ENST00000296861 C15orf53Q8NAA6 179 aa9.83□□□□□ -0.84
TNFRSF21-201ENST00000296861 KLLNB2CW77 178 aa9.83□□□□□ -0.84
TNFRSF21-201ENST00000296861 GAGE5Q13069 117 aa9.83□□□□□ -0.84
TNFRSF21-201ENST00000296861 GAGE6Q13070 117 aa9.83□□□□□ -0.84
TNFRSF21-201ENST00000296861 C10orf105Q8TEF2 133 aa9.83□□□□□ -0.84
TNFRSF21-201ENST00000296861 KIF25-AS1Q9Y6Z4 181 aa9.83□□□□□ -0.84
TNFRSF21-201ENST00000296861 TRIAP1O43715 76 aa9.82□□□□□ -0.84
TNFRSF21-201ENST00000296861 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.82□□□□□ -0.84
TNFRSF21-201ENST00000296861 TRAV4A0A0B4J268 109 aa9.82□□□□□ -0.84
TNFRSF21-201ENST00000296861 GAGE12JA6NER3 117 aa9.82□□□□□ -0.84
TNFRSF21-201ENST00000296861 GAGE4Q13068 117 aa9.82□□□□□ -0.84
TNFRSF21-201ENST00000296861 TRBV27A0A0K0K1C4 114 aa9.81□□□□□ -0.84
TNFRSF21-201ENST00000296861 TMEM223A0PJW6 202 aa9.81□□□□□ -0.84
TNFRSF21-201ENST00000296861 H3BMM0 161 aa9.81□□□□□ -0.84
TNFRSF21-201ENST00000296861 ADAMTSL4-AS1Q5T5F5 129 aa9.81□□□□□ -0.84
TNFRSF21-201ENST00000296861 PRIMA1Q86XR5 153 aa9.81□□□□□ -0.84
TNFRSF21-201ENST00000296861 TMEM61Q8N0U2 210 aa9.81□□□□□ -0.84
TNFRSF21-201ENST00000296861 UBE2WQ96B02 151 aa9.81□□□□□ -0.84
TNFRSF21-201ENST00000296861 CDKN2A-AS1Q9UH64 79 aa9.81□□□□□ -0.84
TNFRSF21-201ENST00000296861 RNASE1P07998 156 aaKnown RBP9.8□□□□□ -0.84
TNFRSF21-201ENST00000296861 Q9H8V8 135 aa9.8□□□□□ -0.84
TNFRSF21-201ENST00000296861 CIRBPQ14011 172 aaKnown RBP9.8□□□□□ -0.84
TNFRSF21-201ENST00000296861 YAE1D1Q9NRH1 226 aa9.8□□□□□ -0.84
TNFRSF21-201ENST00000296861 CRLF1O75462 422 aa9.8□□□□□ -0.84
TNFRSF21-201ENST00000296861 LINC00467Q9BRT7 94 aa9.8□□□□□ -0.84
TNFRSF21-201ENST00000296861 GCN1Q92616 2671 aaKnown RBP9.79□□□□□ -0.84
TNFRSF21-201ENST00000296861 FLNAP21333 2647 aaKnown RBP9.79□□□□□ -0.84
TNFRSF21-201ENST00000296861 RPL35AP18077 110 aaKnown RBP9.79□□□□□ -0.84
TNFRSF21-201ENST00000296861 Q6ZSN1 163 aa9.79□□□□□ -0.84
TNFRSF21-201ENST00000296861 OR13C6PQ8NH95 151 aa9.79□□□□□ -0.84
TNFRSF21-201ENST00000296861 IFITM1P13164 125 aa9.79□□□□□ -0.84
TNFRSF21-201ENST00000296861 M0QXV9 152 aa9.78□□□□□ -0.84
TNFRSF21-201ENST00000296861 RPL32P62910 135 aaKnown RBP9.78□□□□□ -0.84
TNFRSF21-201ENST00000296861 TRGV2A0A075B6R0 118 aa9.78□□□□□ -0.84
TNFRSF21-201ENST00000296861 K7EQG2 157 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 156 ms