RNA–Protein interactions for RNA: ENST00000291525.11

TFF3-201, Transcript of trefoil factor 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TFF3, Length 407 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-201ENST00000291525 hDV102S1A0JD36 115 aa11.18□□□□□ -0.62
TFF3-201ENST00000291525 CNBPP62633 177 aaKnown RBP11.18□□□□□ -0.62
TFF3-201ENST00000291525 TWIST1Q15672 202 aa11.18□□□□□ -0.62
TFF3-201ENST00000291525 TCTE3Q8IZS6 198 aa11.18□□□□□ -0.62
TFF3-201ENST00000291525 NUDT10Q8NFP7 164 aa11.18□□□□□ -0.62
TFF3-201ENST00000291525 NUDT11Q96G61 164 aa11.18□□□□□ -0.62
TFF3-201ENST00000291525 RPP21Q9H633 154 aaKnown RBP11.18□□□□□ -0.62
TFF3-201ENST00000291525 IGLV4-60A0A075B6I1 120 aa11.17□□□□□ -0.62
TFF3-201ENST00000291525 SERTAD4-AS1Q5TG53 156 aa11.17□□□□□ -0.62
TFF3-201ENST00000291525 SMIM15Q7Z3B0 74 aa11.17□□□□□ -0.62
TFF3-201ENST00000291525 CNFNQ9BYD5 112 aa11.17□□□□□ -0.62
TFF3-201ENST00000291525 IGHV3-64A0A075B6Q5 118 aa11.15□□□□□ -0.62
TFF3-201ENST00000291525 SDIM1Q6ZPB5 146 aa11.15□□□□□ -0.62
TFF3-201ENST00000291525 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.15□□□□□ -0.62
TFF3-201ENST00000291525 CFAP161Q6P656 301 aa11.14□□□□□ -0.63
TFF3-201ENST00000291525 RNASE7Q9H1E1 156 aaKnown RBP11.14□□□□□ -0.63
TFF3-201ENST00000291525 NCR2O95944 276 aa11.13□□□□□ -0.63
TFF3-201ENST00000291525 AMMECR1LQ6DCA0 310 aa11.13□□□□□ -0.63
TFF3-201ENST00000291525 TEX261Q6UWH6 196 aa11.13□□□□□ -0.63
TFF3-201ENST00000291525 GATD1Q8NB37 220 aa11.13□□□□□ -0.63
TFF3-201ENST00000291525 GFRA4Q9GZZ7 299 aa11.13□□□□□ -0.63
TFF3-201ENST00000291525 K7EN84 100 aa11.12□□□□□ -0.63
TFF3-201ENST00000291525 OCC1Q8TAD7 63 aa11.12□□□□□ -0.63
TFF3-201ENST00000291525 DPH3Q96FX2 82 aa11.12□□□□□ -0.63
TFF3-201ENST00000291525 RNF185Q96GF1 192 aa11.12□□□□□ -0.63
TFF3-201ENST00000291525 TRAV26-2A0A0B4J265 109 aa11.11□□□□□ -0.63
TFF3-201ENST00000291525 H7C423 109 aa11.11□□□□□ -0.63
TFF3-201ENST00000291525 APCSP02743 223 aa11.11□□□□□ -0.63
TFF3-201ENST00000291525 CIRBPQ14011 172 aaKnown RBP11.11□□□□□ -0.63
TFF3-201ENST00000291525 TMEM250H0YL14 139 aa11.1□□□□□ -0.63
TFF3-201ENST00000291525 GATCO43716 136 aaKnown RBP11.1□□□□□ -0.63
TFF3-201ENST00000291525 BLOC1S1P78537 153 aa11.1□□□□□ -0.63
TFF3-201ENST00000291525 IGKV3OR2-268A0A0C4DH90 116 aa11.09□□□□□ -0.63
TFF3-201ENST00000291525 GAGE12HA6NDE8 117 aa11.09□□□□□ -0.63
TFF3-201ENST00000291525 A8MWL6 223 aa11.09□□□□□ -0.63
TFF3-201ENST00000291525 PANO1I0J062 215 aa11.09□□□□□ -0.63
TFF3-201ENST00000291525 RNASEKQ6P5S7 137 aaKnown RBP11.09□□□□□ -0.63
TFF3-201ENST00000291525 BORCS7Q96B45 105 aa11.09□□□□□ -0.63
TFF3-201ENST00000291525 FAM231DQ6ZW35 169 aa11.08□□□□□ -0.64
TFF3-201ENST00000291525 GTSF1Q8WW33 167 aa11.08□□□□□ -0.64
TFF3-201ENST00000291525 RPL39LQ96EH5 51 aaKnown RBP11.08□□□□□ -0.64
TFF3-201ENST00000291525 SDHAF1A6NFY7 115 aa11.07□□□□□ -0.64
TFF3-201ENST00000291525 ZNF25P17030 456 aaPredicted RBP11.07□□□□□ -0.64
TFF3-201ENST00000291525 Q6ZNX1 250 aa11.07□□□□□ -0.64
TFF3-201ENST00000291525 C15orf56Q8N910 161 aa11.07□□□□□ -0.64
TFF3-201ENST00000291525 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.06□□□□□ -0.64
TFF3-201ENST00000291525 IGKV2-29A2NJV5 120 aaPredicted RBP11.06□□□□□ -0.64
TFF3-201ENST00000291525 SLPIP03973 132 aa11.06□□□□□ -0.64
TFF3-201ENST00000291525 PMCHP20382 165 aa11.06□□□□□ -0.64
TFF3-201ENST00000291525 RPS10P46783 165 aaKnown RBP11.06□□□□□ -0.64
TFF3-201ENST00000291525 CT83Q5H943 113 aa11.06□□□□□ -0.64
TFF3-201ENST00000291525 SPACA4Q8TDM5 124 aa11.06□□□□□ -0.64
TFF3-201ENST00000291525 CHCHD10Q8WYQ3 142 aaPredicted RBP11.06□□□□□ -0.64
TFF3-201ENST00000291525 BTF3L4Q96K17 158 aa11.06□□□□□ -0.64
TFF3-201ENST00000291525 FAM210AQ96ND0 272 aa11.06□□□□□ -0.64
TFF3-201ENST00000291525 A0A087WYN8 130 aa11.05□□□□□ -0.64
TFF3-201ENST00000291525 I3L3M4 83 aa11.05□□□□□ -0.64
TFF3-201ENST00000291525 FGF6P10767 208 aa11.05□□□□□ -0.64
TFF3-201ENST00000291525 HNRNPA3P51991 378 aaKnown RBP11.05□□□□□ -0.64
TFF3-201ENST00000291525 Q6ZRU5 148 aa11.05□□□□□ -0.64
TFF3-201ENST00000291525 AKAP14Q86UN6 197 aa11.05□□□□□ -0.64
TFF3-201ENST00000291525 TMEM101Q96IK0 257 aa11.05□□□□□ -0.64
TFF3-201ENST00000291525 LRP1Q07954 4544 aaKnown RBP11.05□□□□□ -0.64
TFF3-201ENST00000291525 CHTF8P0CG12 524 aa11.04□□□□□ -0.64
TFF3-201ENST00000291525 CEBPGP53567 150 aa11.04□□□□□ -0.64
TFF3-201ENST00000291525 HIGD2BQ4VC39 106 aa11.04□□□□□ -0.64
TFF3-201ENST00000291525 ALKAL2Q6UX46 152 aa11.04□□□□□ -0.64
TFF3-201ENST00000291525 C7orf33Q8WU49 177 aa11.04□□□□□ -0.64
TFF3-201ENST00000291525 PKHD1L1Q86WI1 4243 aa11.03□□□□□ -0.64
TFF3-201ENST00000291525 TRBV6-5A0A0K0K1A5 114 aa11.03□□□□□ -0.64
TFF3-201ENST00000291525 NDUFS6O75380 124 aaKnown RBP11.03□□□□□ -0.64
TFF3-201ENST00000291525 FOXA3P55318 350 aaPredicted RBP11.03□□□□□ -0.64
TFF3-201ENST00000291525 OR5A1Q8NGJ0 315 aa11.03□□□□□ -0.64
TFF3-201ENST00000291525 ST20Q9HBF5 79 aa11.03□□□□□ -0.64
TFF3-201ENST00000291525 PLA2G2DQ9UNK4 145 aa11.03□□□□□ -0.64
TFF3-201ENST00000291525 PKIGQ9Y2B9 76 aa11.03□□□□□ -0.64
TFF3-201ENST00000291525 GVQW2A0A096LPI5 108 aaPredicted RBP11.02□□□□□ -0.65
TFF3-201ENST00000291525 COX6A2Q02221 97 aa11.02□□□□□ -0.65
TFF3-201ENST00000291525 LYPD6BQ8NI32 183 aa11.02□□□□□ -0.65
TFF3-201ENST00000291525 PLAC8Q9NZF1 115 aa11.02□□□□□ -0.65
TFF3-201ENST00000291525 FAT3Q8TDW7 4589 aa11.01□□□□□ -0.65
TFF3-201ENST00000291525 A0A1B0GUT8 65 aa11.01□□□□□ -0.65
TFF3-201ENST00000291525 MRAP2Q96G30 205 aa11.01□□□□□ -0.65
TFF3-201ENST00000291525 SMIM7Q9BQ49 75 aa11.01□□□□□ -0.65
TFF3-201ENST00000291525 EIF5A2Q9GZV4 153 aaKnown RBP11.01□□□□□ -0.65
TFF3-201ENST00000291525 TSKUQ8WUA8 353 aa11□□□□□ -0.65
TFF3-201ENST00000291525 FAM231BA6NCW3 169 aa10.99□□□□□ -0.65
TFF3-201ENST00000291525 HIGD1CA8MV81 97 aa10.99□□□□□ -0.65
TFF3-201ENST00000291525 XCL1P47992 114 aa10.99□□□□□ -0.65
TFF3-201ENST00000291525 FOXI1Q12951 378 aa10.99□□□□□ -0.65
TFF3-201ENST00000291525 MAJINQ3KP22 176 aa10.99□□□□□ -0.65
TFF3-201ENST00000291525 TMEM191AQ9H0A3 160 aa10.99□□□□□ -0.65
TFF3-201ENST00000291525 TMEM242Q9NWH2 141 aa10.99□□□□□ -0.65
TFF3-201ENST00000291525 IGHV1-58A0A0C4DH39 117 aa10.98□□□□□ -0.65
TFF3-201ENST00000291525 IGKV2-24A0A0C4DH68 120 aa10.98□□□□□ -0.65
TFF3-201ENST00000291525 LINC00959A0A1B0GUT2 108 aa10.98□□□□□ -0.65
TFF3-201ENST00000291525 ESDP10768 282 aa10.98□□□□□ -0.65
TFF3-201ENST00000291525 SS18Q15532 418 aa10.98□□□□□ -0.65
TFF3-201ENST00000291525 LINC01551Q86U37 167 aa10.98□□□□□ -0.65
TFF3-201ENST00000291525 OSTCQ9NRP0 149 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms