RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 IGHV1-24A0A0C4DH33 117 aa6.45□□□□□ -1.38
CCDC58-201ENST00000291458 ZNF727A8MUV8 499 aa6.45□□□□□ -1.38
CCDC58-201ENST00000291458 EPM2AB3EWF7 344 aa6.45□□□□□ -1.38
CCDC58-201ENST00000291458 RBX1P62877 108 aa6.45□□□□□ -1.38
CCDC58-201ENST00000291458 Q5VSD8 79 aa6.45□□□□□ -1.38
CCDC58-201ENST00000291458 GTSF1Q8WW33 167 aa6.45□□□□□ -1.38
CCDC58-201ENST00000291458 RPL39LQ96EH5 51 aaKnown RBP6.45□□□□□ -1.38
CCDC58-201ENST00000291458 CHCHD7Q9BUK0 85 aa6.45□□□□□ -1.38
CCDC58-201ENST00000291458 IGLV10-54A0A075B6I4 117 aa6.44□□□□□ -1.38
CCDC58-201ENST00000291458 AMTP48728 403 aa6.44□□□□□ -1.38
CCDC58-201ENST00000291458 TMEM97Q5BJF2 176 aa6.44□□□□□ -1.38
CCDC58-201ENST00000291458 LCE4AQ5TA78 99 aa6.44□□□□□ -1.38
CCDC58-201ENST00000291458 ENHOQ6UWT2 76 aa6.44□□□□□ -1.38
CCDC58-201ENST00000291458 LYPD6BQ8NI32 183 aa6.44□□□□□ -1.38
CCDC58-201ENST00000291458 FAM210AQ96ND0 272 aa6.44□□□□□ -1.38
CCDC58-201ENST00000291458 TMEM243Q9BU79 118 aa6.44□□□□□ -1.38
CCDC58-201ENST00000291458 FAM30AQ9NZY2 134 aa6.44□□□□□ -1.38
CCDC58-201ENST00000291458 IGKV3OR2-268A0A0C4DH90 116 aa6.43□□□□□ -1.38
CCDC58-201ENST00000291458 KRTAP4-8A0A0G2JLE6 195 aa6.43□□□□□ -1.38
CCDC58-201ENST00000291458 UBE2L6O14933 153 aa6.43□□□□□ -1.38
CCDC58-201ENST00000291458 SRP19P09132 144 aaKnown RBP6.43□□□□□ -1.38
CCDC58-201ENST00000291458 PKIAP61925 76 aa6.43□□□□□ -1.38
CCDC58-201ENST00000291458 Q0VG73 95 aa6.43□□□□□ -1.38
CCDC58-201ENST00000291458 COTL1Q14019 142 aa6.43□□□□□ -1.38
CCDC58-201ENST00000291458 SMIM15Q7Z3B0 74 aa6.43□□□□□ -1.38
CCDC58-201ENST00000291458 LINC01551Q86U37 167 aa6.43□□□□□ -1.38
CCDC58-201ENST00000291458 LINC00269Q8N2A0 174 aa6.43□□□□□ -1.38
CCDC58-201ENST00000291458 GATD1Q8NB37 220 aa6.43□□□□□ -1.38
CCDC58-201ENST00000291458 FRZBQ92765 325 aa6.43□□□□□ -1.38
CCDC58-201ENST00000291458 BORCS7Q96B45 105 aa6.43□□□□□ -1.38
CCDC58-201ENST00000291458 COX11Q9Y6N1 276 aa6.43□□□□□ -1.38
CCDC58-201ENST00000291458 RYR1P21817 5038 aa6.43□□□□□ -1.38
CCDC58-201ENST00000291458 A8MWL6 223 aa6.42□□□□□ -1.38
CCDC58-201ENST00000291458 USP17L23D6RBM5 183 aa6.42□□□□□ -1.38
CCDC58-201ENST00000291458 ADIRFQ15847 76 aa6.42□□□□□ -1.38
CCDC58-201ENST00000291458 IQCJQ1A5X6 159 aa6.42□□□□□ -1.38
CCDC58-201ENST00000291458 FAM231DQ6ZW35 169 aa6.42□□□□□ -1.38
CCDC58-201ENST00000291458 GFRA4Q9GZZ7 299 aa6.42□□□□□ -1.38
CCDC58-201ENST00000291458 NIT2Q9NQR4 276 aa6.42□□□□□ -1.38
CCDC58-201ENST00000291458 PCLOQ9Y6V0 5065 aa6.41□□□□□ -1.38
CCDC58-201ENST00000291458 IGLV4-60A0A075B6I1 120 aa6.41□□□□□ -1.38
CCDC58-201ENST00000291458 HIGD1CA8MV81 97 aa6.41□□□□□ -1.38
CCDC58-201ENST00000291458 REG3AQ06141 175 aa6.41□□□□□ -1.38
CCDC58-201ENST00000291458 TMEM70Q9BUB7 260 aa6.41□□□□□ -1.38
CCDC58-201ENST00000291458 CNFNQ9BYD5 112 aa6.41□□□□□ -1.38
CCDC58-201ENST00000291458 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.4□□□□□ -1.38
CCDC58-201ENST00000291458 IGKV2-29A2NJV5 120 aaPredicted RBP6.4□□□□□ -1.38
CCDC58-201ENST00000291458 C9JQL5 133 aa6.4□□□□□ -1.38
CCDC58-201ENST00000291458 GAS8-AS1O95177 125 aa6.4□□□□□ -1.38
CCDC58-201ENST00000291458 NCR2O95944 276 aa6.4□□□□□ -1.38
CCDC58-201ENST00000291458 MIAQ16674 131 aa6.4□□□□□ -1.38
CCDC58-201ENST00000291458 WDR73Q6P4I2 378 aa6.4□□□□□ -1.38
CCDC58-201ENST00000291458 C20orf203Q8NBC4 194 aa6.4□□□□□ -1.38
CCDC58-201ENST00000291458 LRP1BQ9NZR2 4599 aa6.39□□□□□ -1.39
CCDC58-201ENST00000291458 A0A1B0GUT8 65 aa6.39□□□□□ -1.39
CCDC58-201ENST00000291458 SMKR1H3BMG3 65 aa6.39□□□□□ -1.39
CCDC58-201ENST00000291458 APCSP02743 223 aa6.39□□□□□ -1.39
CCDC58-201ENST00000291458 CT83Q5H943 113 aa6.39□□□□□ -1.39
CCDC58-201ENST00000291458 AMMECR1LQ6DCA0 310 aa6.39□□□□□ -1.39
CCDC58-201ENST00000291458 RNASEKQ6P5S7 137 aaKnown RBP6.39□□□□□ -1.39
CCDC58-201ENST00000291458 TSKUQ8WUA8 353 aa6.39□□□□□ -1.39
CCDC58-201ENST00000291458 ISOC2Q96AB3 205 aa6.39□□□□□ -1.39
CCDC58-201ENST00000291458 OSTCQ9NRP0 149 aa6.39□□□□□ -1.39
CCDC58-201ENST00000291458 TMEM242Q9NWH2 141 aa6.39□□□□□ -1.39
CCDC58-201ENST00000291458 HSPG2P98160 4391 aa6.39□□□□□ -1.39
CCDC58-201ENST00000291458 SDHAF1A6NFY7 115 aa6.38□□□□□ -1.39
CCDC58-201ENST00000291458 KRTAP9-7A8MTY7 169 aa6.38□□□□□ -1.39
CCDC58-201ENST00000291458 INAFM2P0DMQ5 153 aa6.38□□□□□ -1.39
CCDC58-201ENST00000291458 RPL23P62829 140 aaKnown RBP6.38□□□□□ -1.39
CCDC58-201ENST00000291458 TMEM241Q24JQ0 296 aa6.38□□□□□ -1.39
CCDC58-201ENST00000291458 C14orf177Q52M58 125 aa6.38□□□□□ -1.39
CCDC58-201ENST00000291458 TEX261Q6UWH6 196 aa6.38□□□□□ -1.39
CCDC58-201ENST00000291458 AMN1Q8IY45 258 aa6.38□□□□□ -1.39
CCDC58-201ENST00000291458 V9GYV3 84 aa6.38□□□□□ -1.39
CCDC58-201ENST00000291458 PRSS1P07477 247 aa6.37□□□□□ -1.39
CCDC58-201ENST00000291458 PMCHP20382 165 aa6.37□□□□□ -1.39
CCDC58-201ENST00000291458 RPS10P46783 165 aaKnown RBP6.37□□□□□ -1.39
CCDC58-201ENST00000291458 PEA15Q15121 130 aa6.37□□□□□ -1.39
CCDC58-201ENST00000291458 SCXQ7RTU7 201 aa6.37□□□□□ -1.39
CCDC58-201ENST00000291458 PRR34Q9NV39 138 aa6.37□□□□□ -1.39
CCDC58-201ENST00000291458 NAT8Q9UHE5 227 aa6.37□□□□□ -1.39
CCDC58-201ENST00000291458 hDV102S1A0JD36 115 aa6.36□□□□□ -1.39
CCDC58-201ENST00000291458 RIGQ13278 110 aa6.36□□□□□ -1.39
CCDC58-201ENST00000291458 RNF151Q2KHN1 245 aa6.36□□□□□ -1.39
CCDC58-201ENST00000291458 NUP35Q8NFH5 326 aa6.36□□□□□ -1.39
CCDC58-201ENST00000291458 RNF185Q96GF1 192 aa6.36□□□□□ -1.39
CCDC58-201ENST00000291458 ST20Q9HBF5 79 aa6.36□□□□□ -1.39
CCDC58-201ENST00000291458 GAGE12HA6NDE8 117 aa6.35□□□□□ -1.39
CCDC58-201ENST00000291458 FGF6P10767 208 aa6.35□□□□□ -1.39
CCDC58-201ENST00000291458 CAMPP49913 170 aa6.35□□□□□ -1.39
CCDC58-201ENST00000291458 FAM74A3Q4VXF1 159 aa6.35□□□□□ -1.39
CCDC58-201ENST00000291458 LCE1DQ5T752 114 aa6.35□□□□□ -1.39
CCDC58-201ENST00000291458 MRPL54Q6P161 138 aaKnown RBP6.35□□□□□ -1.39
CCDC58-201ENST00000291458 KRTAP26-1Q6PEX3 210 aa6.35□□□□□ -1.39
CCDC58-201ENST00000291458 Q6ZSA8 131 aa6.35□□□□□ -1.39
CCDC58-201ENST00000291458 TMEM191AQ9H0A3 160 aa6.35□□□□□ -1.39
CCDC58-201ENST00000291458 ABCA13Q86UQ4 5058 aa6.35□□□□□ -1.39
CCDC58-201ENST00000291458 DNAH5Q8TE73 4624 aa6.34□□□□□ -1.39
CCDC58-201ENST00000291458 A0A1B0GUV1 79 aa6.34□□□□□ -1.39
CCDC58-201ENST00000291458 I3L3M4 83 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms