RNA–Protein interactions for RNA: ENST00000290399.10

SIM2-201, Transcript of SIM bHLH transcription factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIM2, Length 4,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM2-201ENST00000290399 CFAP54Q96N23 3096 aa13.68□□□□□ -0.22
SIM2-201ENST00000290399 GAGE2AQ6NT46 116 aa13.68□□□□□ -0.22
SIM2-201ENST00000290399 F8W735 103 aaPredicted RBP13.68□□□□□ -0.22
SIM2-201ENST00000290399 C9orf66Q5T8R8 295 aa13.68□□□□□ -0.22
SIM2-201ENST00000290399 ANKRD17O75179 2603 aaKnown RBP13.68□□□□□ -0.22
SIM2-201ENST00000290399 DAND5Q8N907 189 aa13.67□□□□□ -0.22
SIM2-201ENST00000290399 IGKV2D-26A0A0A0MRZ7 120 aa13.67□□□□□ -0.22
SIM2-201ENST00000290399 Q6ZSV7 163 aa13.67□□□□□ -0.22
SIM2-201ENST00000290399 NTN5Q8WTR8 489 aaPredicted RBP13.67□□□□□ -0.22
SIM2-201ENST00000290399 CARD19Q96LW7 228 aa13.67□□□□□ -0.22
SIM2-201ENST00000290399 PRSS47A8MTI9 375 aa13.66□□□□□ -0.22
SIM2-201ENST00000290399 WFDC2Q14508 124 aa13.66□□□□□ -0.22
SIM2-201ENST00000290399 GAGE12HA6NDE8 117 aa13.65□□□□□ -0.22
SIM2-201ENST00000290399 MRGPRG-AS1Q2M3A8 158 aa13.65□□□□□ -0.22
SIM2-201ENST00000290399 IGLV1-40P01703 118 aa13.65□□□□□ -0.22
SIM2-201ENST00000290399 RNASE3P12724 160 aaKnown RBP13.65□□□□□ -0.22
SIM2-201ENST00000290399 Q6ZTI0 123 aa13.65□□□□□ -0.22
SIM2-201ENST00000290399 TMEM263Q8WUH6 116 aaKnown RBP13.65□□□□□ -0.22
SIM2-201ENST00000290399 CRLF1O75462 422 aa13.65□□□□□ -0.22
SIM2-201ENST00000290399 TRAV13-2A0A0B4J235 113 aa13.64□□□□□ -0.23
SIM2-201ENST00000290399 DEFB4AO15263 64 aa13.64□□□□□ -0.23
SIM2-201ENST00000290399 IGLV10-54A0A075B6I4 117 aa13.64□□□□□ -0.23
SIM2-201ENST00000290399 UBE2DNLQ8IWF7 75 aa13.64□□□□□ -0.23
SIM2-201ENST00000290399 DEFB135Q30KP9 77 aa13.64□□□□□ -0.23
SIM2-201ENST00000290399 NEXN-AS1Q8NBZ9 246 aa13.63□□□□□ -0.23
SIM2-201ENST00000290399 VSIG2Q96IQ7 327 aa13.63□□□□□ -0.23
SIM2-201ENST00000290399 IGHV3-30-3P0DP02 117 aa13.63□□□□□ -0.23
SIM2-201ENST00000290399 IFITM1P13164 125 aa13.63□□□□□ -0.23
SIM2-201ENST00000290399 URB1-AS1Q96HZ7 61 aa13.63□□□□□ -0.23
SIM2-201ENST00000290399 ZNF702PQ9H963 129 aa13.63□□□□□ -0.23
SIM2-201ENST00000290399 HHLA3Q9XRX5 114 aa13.63□□□□□ -0.23
SIM2-201ENST00000290399 Q6ZUT4 128 aa13.63□□□□□ -0.23
SIM2-201ENST00000290399 NRACQ8N912 160 aa13.63□□□□□ -0.23
SIM2-201ENST00000290399 XIRP2A4UGR9 3374 aa13.62□□□□□ -0.23
SIM2-201ENST00000290399 HIST1H4AP62805 103 aaKnown RBP13.61□□□□□ -0.23
SIM2-201ENST00000290399 HERV-K104P63124 156 aa13.61□□□□□ -0.23
SIM2-201ENST00000290399 PSMG3-AS1Q96PY0 264 aa13.61□□□□□ -0.23
SIM2-201ENST00000290399 M0QY20 66 aa13.61□□□□□ -0.23
SIM2-201ENST00000290399 INAFM2P0DMQ5 153 aa13.61□□□□□ -0.23
SIM2-201ENST00000290399 ATP5G1P05496 136 aa13.61□□□□□ -0.23
SIM2-201ENST00000290399 C18orf65Q6ZTR6 163 aa13.61□□□□□ -0.23
SIM2-201ENST00000290399 TRBV10-1A0A0K0K1A3 114 aa13.6□□□□□ -0.23
SIM2-201ENST00000290399 PCSK5Q92824 1860 aa13.6□□□□□ -0.23
SIM2-201ENST00000290399 KLLNB2CW77 178 aa13.6□□□□□ -0.23
SIM2-201ENST00000290399 DCANP1Q8TF63 244 aa13.6□□□□□ -0.23
SIM2-201ENST00000290399 TNRC6BQ9UPQ9 1833 aaKnown RBP13.6□□□□□ -0.23
SIM2-201ENST00000290399 IGHV1-58A0A0C4DH39 117 aa13.6□□□□□ -0.23
SIM2-201ENST00000290399 CNFNQ9BYD5 112 aa13.6□□□□□ -0.23
SIM2-201ENST00000290399 SPART-AS1P0CW21 52 aa13.59□□□□□ -0.23
SIM2-201ENST00000290399 MAPKAPK5-AS1Q8N8E1 139 aa13.59□□□□□ -0.23
SIM2-201ENST00000290399 PROK1P58294 105 aa13.59□□□□□ -0.23
SIM2-201ENST00000290399 CDH23Q9H251 3354 aa13.59□□□□□ -0.23
SIM2-201ENST00000290399 PSCAO43653 123 aa13.59□□□□□ -0.23
SIM2-201ENST00000290399 EDN2P20800 178 aa13.59□□□□□ -0.23
SIM2-201ENST00000290399 KRTAP10-9P60411 292 aa13.58□□□□□ -0.24
SIM2-201ENST00000290399 PRM2P04554 102 aa13.57□□□□□ -0.24
SIM2-201ENST00000290399 MRPL23Q16540 153 aaKnown RBP13.57□□□□□ -0.24
SIM2-201ENST00000290399 SND1-IT1Q9HBX3 110 aa13.57□□□□□ -0.24
SIM2-201ENST00000290399 Q8N976 141 aa13.57□□□□□ -0.24
SIM2-201ENST00000290399 TRAV4A0A0B4J268 109 aa13.57□□□□□ -0.24
SIM2-201ENST00000290399 WDFY4Q6ZS81 3184 aa13.56□□□□□ -0.24
SIM2-201ENST00000290399 TRBV27A0A0K0K1C4 114 aa13.56□□□□□ -0.24
SIM2-201ENST00000290399 SOCS3O14543 225 aa13.56□□□□□ -0.24
SIM2-201ENST00000290399 ANKRD29Q8N6D5 301 aa13.56□□□□□ -0.24
SIM2-201ENST00000290399 LINC00467Q9BRT7 94 aa13.55□□□□□ -0.24
SIM2-201ENST00000290399 IGLV4-3A0A075B6K6 122 aa13.55□□□□□ -0.24
SIM2-201ENST00000290399 IGHV4-4A0A075B6R2 117 aa13.55□□□□□ -0.24
SIM2-201ENST00000290399 COX7B2Q8TF08 81 aa13.55□□□□□ -0.24
SIM2-201ENST00000290399 ICOSQ9Y6W8 199 aa13.54□□□□□ -0.24
SIM2-201ENST00000290399 CDKN2A-AS1Q9UH64 79 aa13.54□□□□□ -0.24
SIM2-201ENST00000290399 CENPEQ02224 2701 aa13.54□□□□□ -0.24
SIM2-201ENST00000290399 LINC01620Q4KN68 170 aa13.54□□□□□ -0.24
SIM2-201ENST00000290399 TM2D2Q9BX73 214 aa13.54□□□□□ -0.24
SIM2-201ENST00000290399 EDA2RQ9HAV5 297 aa13.54□□□□□ -0.24
SIM2-201ENST00000290399 C2orf91Q6ZV80 131 aa13.53□□□□□ -0.24
SIM2-201ENST00000290399 NDUFA11Q86Y39 141 aa13.53□□□□□ -0.24
SIM2-201ENST00000290399 ZNF22P17026 224 aaPredicted RBP13.53□□□□□ -0.24
SIM2-201ENST00000290399 MRAPQ8TCY5 172 aa13.53□□□□□ -0.24
SIM2-201ENST00000290399 PRO0255Q9UI72 69 aa13.53□□□□□ -0.24
SIM2-201ENST00000290399 COX7A2LO14548 114 aa13.53□□□□□ -0.24
SIM2-201ENST00000290399 CFAP126Q5VTH2 177 aa13.53□□□□□ -0.24
SIM2-201ENST00000290399 TEN1Q86WV5 123 aa13.53□□□□□ -0.24
SIM2-201ENST00000290399 CRYGDP07320 174 aa13.52□□□□□ -0.25
SIM2-201ENST00000290399 BAALC-AS2P0C853 105 aa13.52□□□□□ -0.25
SIM2-201ENST00000290399 POLR2KP53803 58 aaKnown RBP13.52□□□□□ -0.25
SIM2-201ENST00000290399 LINC01006Q8NI28 216 aa13.52□□□□□ -0.25
SIM2-201ENST00000290399 FLNBO75369 2602 aaKnown RBP13.51□□□□□ -0.25
SIM2-201ENST00000290399 TRBV6-5A0A0K0K1A5 114 aa13.51□□□□□ -0.25
SIM2-201ENST00000290399 Q9HAA7 133 aa13.51□□□□□ -0.25
SIM2-201ENST00000290399 IGKV2D-24A0A075B6R9 120 aa13.51□□□□□ -0.25
SIM2-201ENST00000290399 A0A0J9YXY3 114 aa13.51□□□□□ -0.25
SIM2-201ENST00000290399 CRIP2P52943 208 aaPredicted RBP13.51□□□□□ -0.25
SIM2-201ENST00000290399 PTH2Q96A98 100 aa13.51□□□□□ -0.25
SIM2-201ENST00000290399 INSL3P51460 131 aa13.51□□□□□ -0.25
SIM2-201ENST00000290399 IGHV3-30P01768 117 aa13.5□□□□□ -0.25
SIM2-201ENST00000290399 IGHV3-33P01772 117 aa13.5□□□□□ -0.25
SIM2-201ENST00000290399 IGHV3-30-5P0DP03 117 aa13.5□□□□□ -0.25
SIM2-201ENST00000290399 NKAPP1Q8N9T2 125 aa13.5□□□□□ -0.25
SIM2-201ENST00000290399 MIR7-3HGQ8N6C7 128 aa13.49□□□□□ -0.25
SIM2-201ENST00000290399 TINCRA0A1B0GVN0 87 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms