RNA–Protein interactions for RNA: ENST00000285199.11

USP43-201, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP43, Length 4,169 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-201ENST00000285199 LY6LH3BQJ8 138 aa11.83□□□□□ -0.52
USP43-201ENST00000285199 MRPS12O15235 138 aaKnown RBP11.83□□□□□ -0.52
USP43-201ENST00000285199 Q6ZSV7 163 aa11.83□□□□□ -0.52
USP43-201ENST00000285199 TRIAP1O43715 76 aa11.83□□□□□ -0.52
USP43-201ENST00000285199 C10orf99Q6UWK7 81 aa11.83□□□□□ -0.52
USP43-201ENST00000285199 HAMPP81172 84 aa11.82□□□□□ -0.52
USP43-201ENST00000285199 PF4P02776 101 aa11.82□□□□□ -0.52
USP43-201ENST00000285199 NFE4Q86UQ8 179 aa11.82□□□□□ -0.52
USP43-201ENST00000285199 CCDC179H3BU77 68 aa11.82□□□□□ -0.52
USP43-201ENST00000285199 IGHV3-33P01772 117 aa11.82□□□□□ -0.52
USP43-201ENST00000285199 SPATA25Q9BR10 227 aa11.82□□□□□ -0.52
USP43-201ENST00000285199 INAFM2P0DMQ5 153 aa11.81□□□□□ -0.52
USP43-201ENST00000285199 ZNF580Q9UK33 172 aa11.81□□□□□ -0.52
USP43-201ENST00000285199 ATP6V0E2Q8NHE4 81 aa11.81□□□□□ -0.52
USP43-201ENST00000285199 ZNF22P17026 224 aaPredicted RBP11.81□□□□□ -0.52
USP43-201ENST00000285199 ADORA2A-AS1P86434 159 aa11.81□□□□□ -0.52
USP43-201ENST00000285199 NOP10Q9NPE3 64 aaKnown RBP11.8□□□□□ -0.52
USP43-201ENST00000285199 SOCS3O14543 225 aa11.8□□□□□ -0.52
USP43-201ENST00000285199 PIFOQ8TCI5 191 aa11.8□□□□□ -0.52
USP43-201ENST00000285199 SIRPDQ9H106 197 aa11.8□□□□□ -0.52
USP43-201ENST00000285199 CDKN2A-AS1Q9UH64 79 aa11.8□□□□□ -0.52
USP43-201ENST00000285199 RNASE3P12724 160 aaKnown RBP11.8□□□□□ -0.52
USP43-201ENST00000285199 IGHV4-30-2A0A087WSY4 118 aa11.79□□□□□ -0.52
USP43-201ENST00000285199 ATP5G1P05496 136 aa11.79□□□□□ -0.52
USP43-201ENST00000285199 EDN2P20800 178 aa11.79□□□□□ -0.52
USP43-201ENST00000285199 MRGPRG-AS1Q2M3A8 158 aa11.79□□□□□ -0.52
USP43-201ENST00000285199 IGHG4P01861 327 aa11.79□□□□□ -0.52
USP43-201ENST00000285199 XCL1P47992 114 aa11.79□□□□□ -0.52
USP43-201ENST00000285199 PRO3102Q9H379 93 aa11.79□□□□□ -0.52
USP43-201ENST00000285199 ODF3BA8MYP8 253 aa11.79□□□□□ -0.52
USP43-201ENST00000285199 GATA3P23771 443 aa11.79□□□□□ -0.52
USP43-201ENST00000285199 IGHV3-30P01768 117 aa11.79□□□□□ -0.52
USP43-201ENST00000285199 IGHV3-30-5P0DP03 117 aa11.79□□□□□ -0.52
USP43-201ENST00000285199 CLPSL1A2RUU4 121 aa11.78□□□□□ -0.52
USP43-201ENST00000285199 F8W735 103 aaPredicted RBP11.78□□□□□ -0.52
USP43-201ENST00000285199 CDSNQ15517 529 aa11.78□□□□□ -0.52
USP43-201ENST00000285199 TMEM243Q9BU79 118 aa11.78□□□□□ -0.52
USP43-201ENST00000285199 COL5A1P20908 1838 aaPredicted RBP11.78□□□□□ -0.52
USP43-201ENST00000285199 TSPEAR-AS2P59090 65 aa11.77□□□□□ -0.53
USP43-201ENST00000285199 HERVK_113P63121 156 aa11.77□□□□□ -0.53
USP43-201ENST00000285199 IGHV4OR15-8A0A075B7B6 117 aa11.77□□□□□ -0.53
USP43-201ENST00000285199 A0A087WW49 117 aa11.77□□□□□ -0.53
USP43-201ENST00000285199 ESM1Q9NQ30 184 aa11.77□□□□□ -0.53
USP43-201ENST00000285199 KALRNO60229 2985 aa11.77□□□□□ -0.53
USP43-201ENST00000285199 IGHV1-58A0A0C4DH39 117 aa11.76□□□□□ -0.53
USP43-201ENST00000285199 EPG5Q9HCE0 2579 aa11.76□□□□□ -0.53
USP43-201ENST00000285199 A0A1B0GX51 115 aa11.76□□□□□ -0.53
USP43-201ENST00000285199 TMEM126AQ9H061 195 aa11.76□□□□□ -0.53
USP43-201ENST00000285199 IGLV4-3A0A075B6K6 122 aa11.76□□□□□ -0.53
USP43-201ENST00000285199 SRSF2Q01130 221 aaKnown RBP11.76□□□□□ -0.53
USP43-201ENST00000285199 SND1-IT1Q9HBX3 110 aa11.76□□□□□ -0.53
USP43-201ENST00000285199 REV3LO60673 3130 aa11.75□□□□□ -0.53
USP43-201ENST00000285199 IGLV10-54A0A075B6I4 117 aa11.75□□□□□ -0.53
USP43-201ENST00000285199 PIK3CD-AS1Q5SR53 167 aa11.75□□□□□ -0.53
USP43-201ENST00000285199 ADGRG4Q8IZF6 3080 aa11.74□□□□□ -0.53
USP43-201ENST00000285199 A0A0J9YX75 114 aa11.74□□□□□ -0.53
USP43-201ENST00000285199 LECT2O14960 151 aa11.74□□□□□ -0.53
USP43-201ENST00000285199 TRACP01848 142 aa11.74□□□□□ -0.53
USP43-201ENST00000285199 LMO4P61968 165 aa11.74□□□□□ -0.53
USP43-201ENST00000285199 VSIG2Q96IQ7 327 aa11.74□□□□□ -0.53
USP43-201ENST00000285199 C14orf132Q9NPU4 83 aa11.73□□□□□ -0.53
USP43-201ENST00000285199 ZMAT4Q9H898 229 aa11.73□□□□□ -0.53
USP43-201ENST00000285199 CNFNQ9BYD5 112 aa11.73□□□□□ -0.53
USP43-201ENST00000285199 MUC4Q99102 2169 aa11.73□□□□□ -0.53
USP43-201ENST00000285199 TMEM223A0PJW6 202 aa11.72□□□□□ -0.53
USP43-201ENST00000285199 M0QY20 66 aa11.72□□□□□ -0.53
USP43-201ENST00000285199 MIR7-3HGQ8N6C7 128 aa11.72□□□□□ -0.53
USP43-201ENST00000285199 LINC00467Q9BRT7 94 aa11.72□□□□□ -0.53
USP43-201ENST00000285199 TMEM61Q8N0U2 210 aa11.72□□□□□ -0.53
USP43-201ENST00000285199 SPANXA1Q9NS26 97 aa11.72□□□□□ -0.53
USP43-201ENST00000285199 LINC01619G3V211 115 aa11.72□□□□□ -0.53
USP43-201ENST00000285199 DAZ2Q13117 558 aaKnown RBP11.71□□□□□ -0.53
USP43-201ENST00000285199 SDIM1Q6ZPB5 146 aa11.71□□□□□ -0.53
USP43-201ENST00000285199 DAZ4Q86SG3 579 aaKnown RBP11.71□□□□□ -0.53
USP43-201ENST00000285199 DAZ3Q9NR90 486 aaKnown RBP11.71□□□□□ -0.53
USP43-201ENST00000285199 F8P00451 2351 aa11.71□□□□□ -0.53
USP43-201ENST00000285199 SPTBN5Q9NRC6 3674 aaKnown RBP11.71□□□□□ -0.53
USP43-201ENST00000285199 IGHV4-4A0A075B6R2 117 aa11.71□□□□□ -0.53
USP43-201ENST00000285199 H3BT86 120 aa11.71□□□□□ -0.53
USP43-201ENST00000285199 CRLF1O75462 422 aa11.71□□□□□ -0.53
USP43-201ENST00000285199 TRAV13-2A0A0B4J235 113 aa11.71□□□□□ -0.54
USP43-201ENST00000285199 TNFRSF13BO14836 293 aaPredicted RBP11.71□□□□□ -0.54
USP43-201ENST00000285199 IGHG2P01859 326 aa11.7□□□□□ -0.54
USP43-201ENST00000285199 SLPIP03973 132 aa11.7□□□□□ -0.54
USP43-201ENST00000285199 MIAQ16674 131 aa11.7□□□□□ -0.54
USP43-201ENST00000285199 IGLV2-18A0A075B6J9 118 aa11.7□□□□□ -0.54
USP43-201ENST00000285199 RAI1Q7Z5J4 1906 aaPredicted RBP11.7□□□□□ -0.54
USP43-201ENST00000285199 UBE2D1P51668 147 aa11.7□□□□□ -0.54
USP43-201ENST00000285199 POLR2KP53803 58 aaKnown RBP11.7□□□□□ -0.54
USP43-201ENST00000285199 LINC01356Q8N9X3 169 aa11.7□□□□□ -0.54
USP43-201ENST00000285199 A0A0B4J2C4 111 aa11.69□□□□□ -0.54
USP43-201ENST00000285199 AKAP13Q12802 2813 aa11.69□□□□□ -0.54
USP43-201ENST00000285199 SS18Q15532 418 aa11.68□□□□□ -0.54
USP43-201ENST00000285199 TACC2O95359 2948 aa11.68□□□□□ -0.54
USP43-201ENST00000285199 CDIP1Q9H305 208 aa11.68□□□□□ -0.54
USP43-201ENST00000285199 DNAJC30Q96LL9 226 aa11.68□□□□□ -0.54
USP43-201ENST00000285199 UBL5Q9BZL1 73 aa11.68□□□□□ -0.54
USP43-201ENST00000285199 IGIPA6NJ69 53 aa11.67□□□□□ -0.54
USP43-201ENST00000285199 NDUFA7O95182 113 aa11.67□□□□□ -0.54
USP43-201ENST00000285199 POM121L12Q8N7R1 296 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 320.5 ms