RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 Q0VG73 95 aa14.99□□□□□ -0.01
PDLIM3-203ENST00000284771 NXT2Q9NPJ8 142 aaKnown RBP14.99□□□□□ -0.01
PDLIM3-203ENST00000284771 COTL1Q14019 142 aa14.98□□□□□ -0.01
PDLIM3-203ENST00000284771 NIT1Q86X76 327 aa14.98□□□□□ -0.01
PDLIM3-203ENST00000284771 KIR2DL4Q99706 377 aa14.98□□□□□ -0.01
PDLIM3-203ENST00000284771 LINC00588Q9Y4M8 146 aa14.97□□□□□ -0.01
PDLIM3-203ENST00000284771 LINC01546A6NGU7 62 aa14.97□□□□□ -0.01
PDLIM3-203ENST00000284771 TIRAPP58753 221 aa14.97□□□□□ -0.01
PDLIM3-203ENST00000284771 LINC00310P59036 64 aa14.97□□□□□ -0.01
PDLIM3-203ENST00000284771 CHCHD7Q9BUK0 85 aa14.97□□□□□ -0.01
PDLIM3-203ENST00000284771 LINC00614P0C842 121 aa14.96□□□□□ -0.01
PDLIM3-203ENST00000284771 LELP1Q5T871 98 aa14.95□□□□□ -0.02
PDLIM3-203ENST00000284771 NUPR1O60356 82 aa14.94□□□□□ -0.02
PDLIM3-203ENST00000284771 ESDP10768 282 aa14.94□□□□□ -0.02
PDLIM3-203ENST00000284771 FCER1GP30273 86 aa14.94□□□□□ -0.02
PDLIM3-203ENST00000284771 BAGE3Q86Y29 109 aa14.93□□□□□ -0.02
PDLIM3-203ENST00000284771 AMTP48728 403 aa14.93□□□□□ -0.02
PDLIM3-203ENST00000284771 CCL18P55774 89 aa14.93□□□□□ -0.02
PDLIM3-203ENST00000284771 TRBV25-1A0A075B6N4 114 aa14.92□□□□□ -0.02
PDLIM3-203ENST00000284771 IGHV1-24A0A0C4DH33 117 aa14.92□□□□□ -0.02
PDLIM3-203ENST00000284771 LAGE3Q14657 143 aa14.92□□□□□ -0.02
PDLIM3-203ENST00000284771 TMEM97Q5BJF2 176 aa14.92□□□□□ -0.02
PDLIM3-203ENST00000284771 FA2HQ7L5A8 372 aa14.92□□□□□ -0.02
PDLIM3-203ENST00000284771 AP5S1Q9NUS5 200 aa14.92□□□□□ -0.02
PDLIM3-203ENST00000284771 SERF1AO75920 110 aa14.91□□□□□ -0.02
PDLIM3-203ENST00000284771 RNASEKQ6P5S7 137 aaKnown RBP14.91□□□□□ -0.02
PDLIM3-203ENST00000284771 DNAH1Q9P2D7 4330 aa14.9□□□□□ -0.02
PDLIM3-203ENST00000284771 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.9□□□□□ -0.02
PDLIM3-203ENST00000284771 IGKV2-29A2NJV5 120 aaPredicted RBP14.9□□□□□ -0.02
PDLIM3-203ENST00000284771 K7EMI3 77 aa14.9□□□□□ -0.02
PDLIM3-203ENST00000284771 RAB5BP61020 215 aa14.9□□□□□ -0.02
PDLIM3-203ENST00000284771 WFDC10BQ8IUB3 73 aa14.9□□□□□ -0.02
PDLIM3-203ENST00000284771 A0A096LNJ9 63 aa14.9□□□□□ -0.02
PDLIM3-203ENST00000284771 Q8N3U1 123 aa14.9□□□□□ -0.02
PDLIM3-203ENST00000284771 C20orf203Q8NBC4 194 aa14.9□□□□□ -0.02
PDLIM3-203ENST00000284771 MRPS16Q9Y3D3 137 aaKnown RBP14.9□□□□□ -0.02
PDLIM3-203ENST00000284771 RPL39P62891 51 aaKnown RBP14.89□□□□□ -0.03
PDLIM3-203ENST00000284771 PMCHL1Q16048 86 aa14.89□□□□□ -0.03
PDLIM3-203ENST00000284771 ORMDL2Q53FV1 153 aa14.89□□□□□ -0.03
PDLIM3-203ENST00000284771 TMEM243Q9BU79 118 aa14.89□□□□□ -0.03
PDLIM3-203ENST00000284771 VPS13DQ5THJ4 4388 aa14.89□□□□□ -0.03
PDLIM3-203ENST00000284771 NDUFA6P56556 154 aa14.88□□□□□ -0.03
PDLIM3-203ENST00000284771 CHCHD1Q96BP2 118 aaKnown RBP14.88□□□□□ -0.03
PDLIM3-203ENST00000284771 CHCHD5Q9BSY4 110 aa14.88□□□□□ -0.03
PDLIM3-203ENST00000284771 COA6Q5JTJ3 125 aaKnown RBP14.87□□□□□ -0.03
PDLIM3-203ENST00000284771 UPK3BQ9BT76 320 aa14.87□□□□□ -0.03
PDLIM3-203ENST00000284771 GAGE6Q13070 117 aa14.87□□□□□ -0.03
PDLIM3-203ENST00000284771 TRAV8-6A0A0B4J262 113 aa14.86□□□□□ -0.03
PDLIM3-203ENST00000284771 FAM19A2Q8N3H0 131 aa14.86□□□□□ -0.03
PDLIM3-203ENST00000284771 BTF3P20290 206 aaKnown RBP14.85□□□□□ -0.03
PDLIM3-203ENST00000284771 C2orf66Q6UXQ4 117 aa14.85□□□□□ -0.03
PDLIM3-203ENST00000284771 MPV17L2Q567V2 206 aa14.84□□□□□ -0.03
PDLIM3-203ENST00000284771 TMEM262E9PQX1 116 aa14.84□□□□□ -0.03
PDLIM3-203ENST00000284771 UBE2DNLQ8IWF7 75 aa14.84□□□□□ -0.03
PDLIM3-203ENST00000284771 Q8N976 141 aa14.84□□□□□ -0.03
PDLIM3-203ENST00000284771 HSBP1O75506 76 aa14.83□□□□□ -0.04
PDLIM3-203ENST00000284771 LGALS9CQ6DKI2 356 aa14.83□□□□□ -0.04
PDLIM3-203ENST00000284771 FAM104AQ969W3 186 aa14.83□□□□□ -0.04
PDLIM3-203ENST00000284771 Q9H8V8 135 aa14.83□□□□□ -0.04
PDLIM3-203ENST00000284771 UBE2D4Q9Y2X8 147 aa14.83□□□□□ -0.04
PDLIM3-203ENST00000284771 H7C423 109 aa14.82□□□□□ -0.04
PDLIM3-203ENST00000284771 UBE2L6O14933 153 aa14.82□□□□□ -0.04
PDLIM3-203ENST00000284771 FGF6P10767 208 aa14.82□□□□□ -0.04
PDLIM3-203ENST00000284771 TOMM6Q96B49 74 aa14.82□□□□□ -0.04
PDLIM3-203ENST00000284771 IGLV4-60A0A075B6I1 120 aa14.81□□□□□ -0.04
PDLIM3-203ENST00000284771 SIVA1O15304 175 aa14.81□□□□□ -0.04
PDLIM3-203ENST00000284771 CYSLTR1Q9Y271 337 aa14.81□□□□□ -0.04
PDLIM3-203ENST00000284771 RBX1P62877 108 aa14.81□□□□□ -0.04
PDLIM3-203ENST00000284771 HBDP02042 147 aa14.8□□□□□ -0.04
PDLIM3-203ENST00000284771 DNAH10OSP0CZ25 163 aa14.8□□□□□ -0.04
PDLIM3-203ENST00000284771 MRPL52Q86TS9 123 aaKnown RBP14.8□□□□□ -0.04
PDLIM3-203ENST00000284771 OPRPNQ99935 248 aaPredicted RBP14.8□□□□□ -0.04
PDLIM3-203ENST00000284771 KMT2AQ03164 3969 aa14.79□□□□□ -0.04
PDLIM3-203ENST00000284771 A0A1B0GUV1 79 aa14.79□□□□□ -0.04
PDLIM3-203ENST00000284771 IGIPA6NJ69 53 aa14.79□□□□□ -0.04
PDLIM3-203ENST00000284771 IGHV3-30P01768 117 aa14.79□□□□□ -0.04
PDLIM3-203ENST00000284771 IGHV3-33P01772 117 aa14.79□□□□□ -0.04
PDLIM3-203ENST00000284771 IGHV3-30-3P0DP02 117 aa14.79□□□□□ -0.04
PDLIM3-203ENST00000284771 IGHV3-30-5P0DP03 117 aa14.79□□□□□ -0.04
PDLIM3-203ENST00000284771 LINC01556Q5JQF7 62 aa14.79□□□□□ -0.04
PDLIM3-203ENST00000284771 LINC00476Q8WZB0 136 aa14.79□□□□□ -0.04
PDLIM3-203ENST00000284771 TMEM18Q96B42 140 aa14.79□□□□□ -0.04
PDLIM3-203ENST00000284771 TMA7Q9Y2S6 64 aaKnown RBP14.79□□□□□ -0.04
PDLIM3-203ENST00000284771 A0A087WX48 190 aa14.77□□□□□ -0.04
PDLIM3-203ENST00000284771 PDZD11Q5EBL8 140 aa14.77□□□□□ -0.04
PDLIM3-203ENST00000284771 CSDC2Q9Y534 153 aaKnown RBP14.77□□□□□ -0.04
PDLIM3-203ENST00000284771 LY6G6CO95867 125 aa14.77□□□□□ -0.05
PDLIM3-203ENST00000284771 AMMECR1LQ6DCA0 310 aa14.77□□□□□ -0.05
PDLIM3-203ENST00000284771 TIMM21Q9BVV7 248 aa14.77□□□□□ -0.05
PDLIM3-203ENST00000284771 PYGO1Q9Y3Y4 419 aa14.77□□□□□ -0.05
PDLIM3-203ENST00000284771 G0S2P27469 103 aa14.76□□□□□ -0.05
PDLIM3-203ENST00000284771 SNRPEP62304 92 aaKnown RBP14.76□□□□□ -0.05
PDLIM3-203ENST00000284771 S100A6P06703 90 aa14.75□□□□□ -0.05
PDLIM3-203ENST00000284771 ZNF25P17030 456 aaPredicted RBP14.75□□□□□ -0.05
PDLIM3-203ENST00000284771 LINC00173Q6ZV60 143 aa14.75□□□□□ -0.05
PDLIM3-203ENST00000284771 CDC42SE2Q9NRR3 84 aa14.75□□□□□ -0.05
PDLIM3-203ENST00000284771 SPANXA1Q9NS26 97 aa14.75□□□□□ -0.05
PDLIM3-203ENST00000284771 C5orf52A6NGY3 159 aa14.74□□□□□ -0.05
PDLIM3-203ENST00000284771 RNASE13Q5GAN3 156 aaKnown RBP14.74□□□□□ -0.05
PDLIM3-203ENST00000284771 ERASQ7Z444 233 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms