RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 EIF4EBP1Q13541 118 aaPredicted RBP12.48□□□□□ -0.41
SH3RF1-201ENST00000284637 HIVEP2P31629 2446 aa12.48□□□□□ -0.41
SH3RF1-201ENST00000284637 OTOGLQ3ZCN5 2332 aa12.48□□□□□ -0.41
SH3RF1-201ENST00000284637 SDIM1Q6ZPB5 146 aa12.47□□□□□ -0.41
SH3RF1-201ENST00000284637 COX7CP15954 63 aa12.46□□□□□ -0.41
SH3RF1-201ENST00000284637 HHLA3Q9XRX5 114 aa12.46□□□□□ -0.41
SH3RF1-201ENST00000284637 TRAV23DV6A0A075B6W5 121 aa12.46□□□□□ -0.41
SH3RF1-201ENST00000284637 NREPQ16612 68 aa12.46□□□□□ -0.41
SH3RF1-201ENST00000284637 LINC00574Q9H8X3 128 aa12.46□□□□□ -0.41
SH3RF1-201ENST00000284637 TANC2Q9HCD6 1990 aa12.46□□□□□ -0.41
SH3RF1-201ENST00000284637 TRIAP1O43715 76 aa12.46□□□□□ -0.42
SH3RF1-201ENST00000284637 IGF1P05019 195 aa12.46□□□□□ -0.42
SH3RF1-201ENST00000284637 C14orf132Q9NPU4 83 aa12.46□□□□□ -0.42
SH3RF1-201ENST00000284637 SMIM9A6NGZ8 99 aa12.45□□□□□ -0.42
SH3RF1-201ENST00000284637 TNRC6BQ9UPQ9 1833 aaKnown RBP12.45□□□□□ -0.42
SH3RF1-201ENST00000284637 DEFB4AO15263 64 aa12.45□□□□□ -0.42
SH3RF1-201ENST00000284637 SERP2Q8N6R1 65 aa12.45□□□□□ -0.42
SH3RF1-201ENST00000284637 LINC00694P0DN24 101 aa12.45□□□□□ -0.42
SH3RF1-201ENST00000284637 CRIP1P50238 77 aa12.45□□□□□ -0.42
SH3RF1-201ENST00000284637 TECTAO75443 2155 aa12.44□□□□□ -0.42
SH3RF1-201ENST00000284637 MYCNOSP40205 109 aa12.44□□□□□ -0.42
SH3RF1-201ENST00000284637 C22orf34Q6ZV56 151 aa12.44□□□□□ -0.42
SH3RF1-201ENST00000284637 SPART-AS1P0CW21 52 aa12.44□□□□□ -0.42
SH3RF1-201ENST00000284637 CCDC168Q8NDH2 2452 aa12.43□□□□□ -0.42
SH3RF1-201ENST00000284637 IGF2-ASQ6U949 168 aa12.43□□□□□ -0.42
SH3RF1-201ENST00000284637 URB1-AS1Q96HZ7 61 aa12.43□□□□□ -0.42
SH3RF1-201ENST00000284637 MYO9AB2RTY4 2548 aa12.43□□□□□ -0.42
SH3RF1-201ENST00000284637 DEFB113Q30KQ7 82 aa12.42□□□□□ -0.42
SH3RF1-201ENST00000284637 A0A0U1RQV1 116 aa12.42□□□□□ -0.42
SH3RF1-201ENST00000284637 ZNF106Q9H2Y7 1883 aaKnown RBP12.42□□□□□ -0.42
SH3RF1-201ENST00000284637 SPAG11BQ08648 103 aa12.41□□□□□ -0.42
SH3RF1-201ENST00000284637 ABCA2Q9BZC7 2435 aa12.41□□□□□ -0.42
SH3RF1-201ENST00000284637 HIST2H2BDQ6DRA6 164 aa12.41□□□□□ -0.42
SH3RF1-201ENST00000284637 PIEZO2Q9H5I5 2752 aa12.41□□□□□ -0.42
SH3RF1-201ENST00000284637 ATP5EP2Q5VTU8 51 aa12.41□□□□□ -0.42
SH3RF1-201ENST00000284637 HIVEP3Q5T1R4 2406 aa12.41□□□□□ -0.42
SH3RF1-201ENST00000284637 NDUFC2-KCTD14E9PQ53 114 aa12.4□□□□□ -0.42
SH3RF1-201ENST00000284637 NDUFA1O15239 70 aa12.4□□□□□ -0.42
SH3RF1-201ENST00000284637 KLK12Q9UKR0 248 aa12.4□□□□□ -0.42
SH3RF1-201ENST00000284637 H3BQ85 93 aa12.4□□□□□ -0.42
SH3RF1-201ENST00000284637 TMEM256-PLSCR3K7ERE1 68 aa12.4□□□□□ -0.42
SH3RF1-201ENST00000284637 WDR87Q6ZQQ6 2873 aa12.4□□□□□ -0.42
SH3RF1-201ENST00000284637 FAM240AA0A1B0GVK7 77 aa12.39□□□□□ -0.43
SH3RF1-201ENST00000284637 WFDC9Q8NEX5 89 aa12.39□□□□□ -0.43
SH3RF1-201ENST00000284637 RNF185Q96GF1 192 aa12.39□□□□□ -0.43
SH3RF1-201ENST00000284637 UPK3BQ9BT76 320 aa12.39□□□□□ -0.43
SH3RF1-201ENST00000284637 ODF3BA8MYP8 253 aa12.39□□□□□ -0.43
SH3RF1-201ENST00000284637 DEFB135Q30KP9 77 aa12.39□□□□□ -0.43
SH3RF1-201ENST00000284637 CDKN2A-AS1Q9UH64 79 aa12.39□□□□□ -0.43
SH3RF1-201ENST00000284637 KIAA1549Q9HCM3 1950 aa12.39□□□□□ -0.43
SH3RF1-201ENST00000284637 A6NDX4 124 aa12.39□□□□□ -0.43
SH3RF1-201ENST00000284637 C9orf66Q5T8R8 295 aa12.39□□□□□ -0.43
SH3RF1-201ENST00000284637 ADAMTS9Q9P2N4 1935 aa12.38□□□□□ -0.43
SH3RF1-201ENST00000284637 MRPL55Q7Z7F7 128 aaKnown RBP12.38□□□□□ -0.43
SH3RF1-201ENST00000284637 C20orf173Q96LM9 149 aa12.38□□□□□ -0.43
SH3RF1-201ENST00000284637 Q8NA96 180 aa12.38□□□□□ -0.43
SH3RF1-201ENST00000284637 C2orf16Q68DN1 1984 aa12.38□□□□□ -0.43
SH3RF1-201ENST00000284637 DOPEY1Q5JWR5 2465 aa12.38□□□□□ -0.43
SH3RF1-201ENST00000284637 J3QKU1 62 aa12.38□□□□□ -0.43
SH3RF1-201ENST00000284637 ZNF22P17026 224 aaPredicted RBP12.37□□□□□ -0.43
SH3RF1-201ENST00000284637 DIRC1Q969H9 104 aa12.37□□□□□ -0.43
SH3RF1-201ENST00000284637 USP17L23D6RBM5 183 aa12.37□□□□□ -0.43
SH3RF1-201ENST00000284637 PDE6GP18545 87 aa12.37□□□□□ -0.43
SH3RF1-201ENST00000284637 Q6ZTI0 123 aa12.37□□□□□ -0.43
SH3RF1-201ENST00000284637 WFDC11Q8NEX6 87 aa12.37□□□□□ -0.43
SH3RF1-201ENST00000284637 TMEM263Q8WUH6 116 aaKnown RBP12.37□□□□□ -0.43
SH3RF1-201ENST00000284637 MAP6D1Q9H9H5 199 aa12.37□□□□□ -0.43
SH3RF1-201ENST00000284637 TMEM223A0PJW6 202 aa12.36□□□□□ -0.43
SH3RF1-201ENST00000284637 CXCL5P42830 114 aa12.36□□□□□ -0.43
SH3RF1-201ENST00000284637 LINC00467Q9BRT7 94 aa12.36□□□□□ -0.43
SH3RF1-201ENST00000284637 TRBV10-1A0A0K0K1A3 114 aa12.36□□□□□ -0.43
SH3RF1-201ENST00000284637 TIRAPP58753 221 aa12.36□□□□□ -0.43
SH3RF1-201ENST00000284637 NAV2Q8IVL1 2488 aa12.36□□□□□ -0.43
SH3RF1-201ENST00000284637 TMEM89A2RUT3 159 aa12.35□□□□□ -0.43
SH3RF1-201ENST00000284637 LMO4P61968 165 aa12.35□□□□□ -0.43
SH3RF1-201ENST00000284637 IGLV2-11P01706 119 aa12.35□□□□□ -0.43
SH3RF1-201ENST00000284637 MP68P56378 58 aa12.35□□□□□ -0.43
SH3RF1-201ENST00000284637 MPLKIPQ8TAP9 179 aa12.35□□□□□ -0.43
SH3RF1-201ENST00000284637 HIGD2BQ4VC39 106 aa12.35□□□□□ -0.43
SH3RF1-201ENST00000284637 SMAD5-AS1Q9Y6J3 95 aa12.35□□□□□ -0.43
SH3RF1-201ENST00000284637 IGLV4-3A0A075B6K6 122 aa12.35□□□□□ -0.43
SH3RF1-201ENST00000284637 LST1O00453 97 aa12.35□□□□□ -0.43
SH3RF1-201ENST00000284637 SHISA2Q6UWI4 295 aa12.35□□□□□ -0.43
SH3RF1-201ENST00000284637 DAZAP2Q15038 168 aaPredicted RBP12.34□□□□□ -0.43
SH3RF1-201ENST00000284637 FBXL19-AS1Q494R0 122 aa12.34□□□□□ -0.43
SH3RF1-201ENST00000284637 HRCT1Q6UXD1 115 aa12.34□□□□□ -0.43
SH3RF1-201ENST00000284637 C4orf3Q8WVX3 66 aa12.34□□□□□ -0.43
SH3RF1-201ENST00000284637 NAV3Q8IVL0 2385 aa12.34□□□□□ -0.43
SH3RF1-201ENST00000284637 LINC00526Q96FQ7 95 aa12.33□□□□□ -0.43
SH3RF1-201ENST00000284637 TMEM131Q92545 1883 aa12.33□□□□□ -0.44
SH3RF1-201ENST00000284637 ZFAND2AQ8N6M9 145 aa12.32□□□□□ -0.44
SH3RF1-201ENST00000284637 ZMAT4Q9H898 229 aa12.32□□□□□ -0.44
SH3RF1-201ENST00000284637 ZFAND3Q9H8U3 227 aa12.32□□□□□ -0.44
SH3RF1-201ENST00000284637 PRO0255Q9UI72 69 aa12.32□□□□□ -0.44
SH3RF1-201ENST00000284637 KIAA1549LQ6ZVL6 1849 aa12.32□□□□□ -0.44
SH3RF1-201ENST00000284637 C1orf195Q5TG92 126 aa12.32□□□□□ -0.44
SH3RF1-201ENST00000284637 CCL18P55774 89 aa12.31□□□□□ -0.44
SH3RF1-201ENST00000284637 PIK3CD-AS1Q5SR53 167 aa12.31□□□□□ -0.44
SH3RF1-201ENST00000284637 FAM19A5Q7Z5A7 132 aaPredicted RBP12.31□□□□□ -0.44
SH3RF1-201ENST00000284637 HCFC1P51610 2035 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms