RNA–Protein interactions for RNA: ENST00000283290.9

ATG3-201, Transcript of autophagy related 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG3, Length 1,570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-201ENST00000283290 KIAA1644Q3SXP7 199 aa11.77□□□□□ -0.53
ATG3-201ENST00000283290 TTC32Q5I0X7 151 aa11.77□□□□□ -0.53
ATG3-201ENST00000283290 TMEM136Q6ZRR5 245 aa11.77□□□□□ -0.53
ATG3-201ENST00000283290 NIT1Q86X76 327 aa11.77□□□□□ -0.53
ATG3-201ENST00000283290 LINC01556Q5JQF7 62 aa11.76□□□□□ -0.53
ATG3-201ENST00000283290 TMEM70Q9BUB7 260 aa11.76□□□□□ -0.53
ATG3-201ENST00000283290 BIRC6Q9NR09 4857 aa11.76□□□□□ -0.53
ATG3-201ENST00000283290 TRBV6-5A0A0K0K1A5 114 aa11.75□□□□□ -0.53
ATG3-201ENST00000283290 MT-ND6P03923 174 aa11.75□□□□□ -0.53
ATG3-201ENST00000283290 PMCHP20382 165 aa11.75□□□□□ -0.53
ATG3-201ENST00000283290 COTL1Q14019 142 aa11.75□□□□□ -0.53
ATG3-201ENST00000283290 MPV17L2Q567V2 206 aa11.75□□□□□ -0.53
ATG3-201ENST00000283290 C6orf223Q8N319 242 aa11.75□□□□□ -0.53
ATG3-201ENST00000283290 Q8N976 141 aa11.75□□□□□ -0.53
ATG3-201ENST00000283290 TRAPPC1Q9Y5R8 145 aa11.75□□□□□ -0.53
ATG3-201ENST00000283290 TRBV25-1A0A075B6N4 114 aa11.75□□□□□ -0.53
ATG3-201ENST00000283290 IGHV1-24A0A0C4DH33 117 aa11.75□□□□□ -0.53
ATG3-201ENST00000283290 TNFRSF6BO95407 300 aa11.75□□□□□ -0.53
ATG3-201ENST00000283290 FABP9Q0Z7S8 132 aa11.75□□□□□ -0.53
ATG3-201ENST00000283290 FRZBQ92765 325 aa11.75□□□□□ -0.53
ATG3-201ENST00000283290 Q9HAA7 133 aa11.75□□□□□ -0.53
ATG3-201ENST00000283290 TSHBP01222 138 aa11.74□□□□□ -0.53
ATG3-201ENST00000283290 HLA-DQA1P01909 254 aa11.74□□□□□ -0.53
ATG3-201ENST00000283290 AMTP48728 403 aa11.74□□□□□ -0.53
ATG3-201ENST00000283290 POLR2KP53803 58 aaKnown RBP11.74□□□□□ -0.53
ATG3-201ENST00000283290 LINC00336Q6ZUF6 198 aa11.74□□□□□ -0.53
ATG3-201ENST00000283290 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.73□□□□□ -0.53
ATG3-201ENST00000283290 IGKV2-29A2NJV5 120 aaPredicted RBP11.73□□□□□ -0.53
ATG3-201ENST00000283290 PRSS29PA6NIE9 313 aa11.73□□□□□ -0.53
ATG3-201ENST00000283290 SUMO2P61956 95 aaKnown RBP11.73□□□□□ -0.53
ATG3-201ENST00000283290 IQCJQ1A5X6 159 aa11.73□□□□□ -0.53
ATG3-201ENST00000283290 PRELID3AQ96N28 172 aa11.73□□□□□ -0.53
ATG3-201ENST00000283290 MRPL18Q9H0U6 180 aaKnown RBP11.73□□□□□ -0.53
ATG3-201ENST00000283290 A0A087WX48 190 aa11.72□□□□□ -0.53
ATG3-201ENST00000283290 I3L3M4 83 aa11.72□□□□□ -0.53
ATG3-201ENST00000283290 TMEM243Q9BU79 118 aa11.72□□□□□ -0.53
ATG3-201ENST00000283290 KLK12Q9UKR0 248 aa11.72□□□□□ -0.53
ATG3-201ENST00000283290 LOC389332A0A1B0GUA5 103 aa11.71□□□□□ -0.53
ATG3-201ENST00000283290 HIST1H2BKO60814 126 aa11.71□□□□□ -0.53
ATG3-201ENST00000283290 HIST1H2BJP06899 126 aa11.71□□□□□ -0.53
ATG3-201ENST00000283290 HIST1H2BOP23527 126 aa11.71□□□□□ -0.53
ATG3-201ENST00000283290 HIST1H2BBP33778 126 aa11.71□□□□□ -0.53
ATG3-201ENST00000283290 HIST1H2BDP58876 126 aa11.71□□□□□ -0.53
ATG3-201ENST00000283290 HIST1H2BCP62807 126 aa11.71□□□□□ -0.53
ATG3-201ENST00000283290 HIST2H2BEQ16778 126 aa11.71□□□□□ -0.53
ATG3-201ENST00000283290 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.71□□□□□ -0.53
ATG3-201ENST00000283290 CLPSL2Q6UWE3 100 aa11.71□□□□□ -0.53
ATG3-201ENST00000283290 ORMDL3Q8N138 153 aa11.71□□□□□ -0.53
ATG3-201ENST00000283290 HIST1H2BHQ93079 126 aa11.71□□□□□ -0.53
ATG3-201ENST00000283290 HIST1H2BNQ99877 126 aa11.71□□□□□ -0.53
ATG3-201ENST00000283290 HIST1H2BMQ99879 126 aa11.71□□□□□ -0.53
ATG3-201ENST00000283290 PKD1P98161 4303 aa11.71□□□□□ -0.54
ATG3-201ENST00000283290 TRAV9-2A0A087WT02 112 aa11.71□□□□□ -0.54
ATG3-201ENST00000283290 CHCHD7Q9BUK0 85 aa11.71□□□□□ -0.54
ATG3-201ENST00000283290 TRBV27A0A0K0K1C4 114 aa11.7□□□□□ -0.54
ATG3-201ENST00000283290 APCSP02743 223 aa11.7□□□□□ -0.54
ATG3-201ENST00000283290 RBX1P62877 108 aa11.7□□□□□ -0.54
ATG3-201ENST00000283290 TMEM97Q5BJF2 176 aa11.7□□□□□ -0.54
ATG3-201ENST00000283290 IGLV4-60A0A075B6I1 120 aa11.69□□□□□ -0.54
ATG3-201ENST00000283290 TCAPO15273 167 aa11.69□□□□□ -0.54
ATG3-201ENST00000283290 TNP2Q05952 138 aa11.69□□□□□ -0.54
ATG3-201ENST00000283290 IBA57-AS1B1ANH7 110 aa11.68□□□□□ -0.54
ATG3-201ENST00000283290 VCYO14598 125 aa11.68□□□□□ -0.54
ATG3-201ENST00000283290 ANGP03950 147 aaKnown RBP11.68□□□□□ -0.54
ATG3-201ENST00000283290 SMIM2Q9BVW6 85 aa11.68□□□□□ -0.54
ATG3-201ENST00000283290 A0A1B0GVY2 172 aa11.67□□□□□ -0.54
ATG3-201ENST00000283290 UBE2L6O14933 153 aa11.67□□□□□ -0.54
ATG3-201ENST00000283290 PPBPP02775 128 aa11.67□□□□□ -0.54
ATG3-201ENST00000283290 FCER1GP30273 86 aa11.67□□□□□ -0.54
ATG3-201ENST00000283290 Q6ZRN7 208 aaPredicted RBP11.67□□□□□ -0.54
ATG3-201ENST00000283290 UBE2WQ96B02 151 aa11.67□□□□□ -0.54
ATG3-201ENST00000283290 C20orf78Q9BR46 151 aa11.67□□□□□ -0.54
ATG3-201ENST00000283290 PPP1R17O96001 155 aa11.67□□□□□ -0.54
ATG3-201ENST00000283290 C10orf126Q8N4M7 172 aa11.67□□□□□ -0.54
ATG3-201ENST00000283290 PKHD1P08F94 4074 aa11.66□□□□□ -0.54
ATG3-201ENST00000283290 LINC00269Q8N2A0 174 aa11.66□□□□□ -0.54
ATG3-201ENST00000283290 DNAH11Q96DT5 4516 aa11.65□□□□□ -0.54
ATG3-201ENST00000283290 K7EP13 123 aa11.65□□□□□ -0.54
ATG3-201ENST00000283290 S100A6P06703 90 aa11.65□□□□□ -0.54
ATG3-201ENST00000283290 ESDP10768 282 aa11.65□□□□□ -0.54
ATG3-201ENST00000283290 BTF3P20290 206 aaKnown RBP11.65□□□□□ -0.54
ATG3-201ENST00000283290 RNASEKQ6P5S7 137 aaKnown RBP11.65□□□□□ -0.54
ATG3-201ENST00000283290 ENHOQ6UWT2 76 aa11.65□□□□□ -0.54
ATG3-201ENST00000283290 C20orf203Q8NBC4 194 aa11.65□□□□□ -0.54
ATG3-201ENST00000283290 KIR2DL4Q99706 377 aa11.65□□□□□ -0.54
ATG3-201ENST00000283290 NDUFA6P56556 154 aa11.64□□□□□ -0.55
ATG3-201ENST00000283290 IGKV3OR2-268A0A0C4DH90 116 aa11.63□□□□□ -0.55
ATG3-201ENST00000283290 FGF6P10767 208 aa11.63□□□□□ -0.55
ATG3-201ENST00000283290 FUSP35637 526 aaKnown RBP eCLIP11.63□□□□□ -0.55
ATG3-201ENST00000283290 RPL39P62891 51 aaKnown RBP11.63□□□□□ -0.55
ATG3-201ENST00000283290 MAP1LC3AQ9H492 121 aa11.63□□□□□ -0.55
ATG3-201ENST00000283290 C5orf52A6NGY3 159 aa11.62□□□□□ -0.55
ATG3-201ENST00000283290 SNRPEP62304 92 aaKnown RBP11.62□□□□□ -0.55
ATG3-201ENST00000283290 AMMECR1LQ6DCA0 310 aa11.62□□□□□ -0.55
ATG3-201ENST00000283290 ALKBH7Q9BT30 221 aaPredicted RBP11.62□□□□□ -0.55
ATG3-201ENST00000283290 IFI27P40305 119 aaPredicted RBP11.62□□□□□ -0.55
ATG3-201ENST00000283290 RNASE13Q5GAN3 156 aaKnown RBP11.62□□□□□ -0.55
ATG3-201ENST00000283290 IGLV10-54A0A075B6I4 117 aa11.61□□□□□ -0.55
ATG3-201ENST00000283290 IGKV2D-24A0A075B6R9 120 aa11.61□□□□□ -0.55
ATG3-201ENST00000283290 LOC105371267A0A1B0GV96 52 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms