RNA–Protein interactions for RNA: ENST00000273047.8

RAB5A-201, Transcript of RAB5A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5A, Length 2,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5A-201ENST00000273047 PLEKHB2Q96CS7 222 aa14.76□□□□□ -0.05
RAB5A-201ENST00000273047 HECTD1Q9ULT8 2610 aa14.75□□□□□ -0.05
RAB5A-201ENST00000273047 ZNF815PA8K554 130 aa14.75□□□□□ -0.05
RAB5A-201ENST00000273047 SPINK8P0C7L1 97 aa14.75□□□□□ -0.05
RAB5A-201ENST00000273047 CD28P10747 220 aa14.75□□□□□ -0.05
RAB5A-201ENST00000273047 LOC107984156A0A0G2JMH3 177 aa14.75□□□□□ -0.05
RAB5A-201ENST00000273047 TRBV27A0A0K0K1C4 114 aa14.75□□□□□ -0.05
RAB5A-201ENST00000273047 C11orf86A6NJI1 115 aa14.75□□□□□ -0.05
RAB5A-201ENST00000273047 TSPAN13O95857 204 aa14.75□□□□□ -0.05
RAB5A-201ENST00000273047 UBE2D1P51668 147 aa14.75□□□□□ -0.05
RAB5A-201ENST00000273047 CRYBA4P53673 196 aa14.75□□□□□ -0.05
RAB5A-201ENST00000273047 ARL17AQ8IVW1 177 aa14.75□□□□□ -0.05
RAB5A-201ENST00000273047 MT-ATP8P03928 68 aa14.74□□□□□ -0.05
RAB5A-201ENST00000273047 ZNF418Q8TF45 676 aaPredicted RBP14.74□□□□□ -0.05
RAB5A-201ENST00000273047 PTH2Q96A98 100 aa14.74□□□□□ -0.05
RAB5A-201ENST00000273047 IGLV4-69A0A075B6H9 119 aa14.74□□□□□ -0.05
RAB5A-201ENST00000273047 TMEM238LA0A1B0GVL6 79 aa14.74□□□□□ -0.05
RAB5A-201ENST00000273047 A6NJY4 79 aa14.74□□□□□ -0.05
RAB5A-201ENST00000273047 SCGB1D4Q6XE38 83 aa14.74□□□□□ -0.05
RAB5A-201ENST00000273047 SRSF9Q13242 221 aaKnown RBP eCLIP14.73□□□□□ -0.05
RAB5A-201ENST00000273047 GCN1Q92616 2671 aaKnown RBP14.73□□□□□ -0.05
RAB5A-201ENST00000273047 TRGV11A0A075B6L2 103 aa14.72□□□□□ -0.05
RAB5A-201ENST00000273047 IGHV3OR16-12A0A075B7B8 117 aa14.72□□□□□ -0.05
RAB5A-201ENST00000273047 UBE2D3P61077 147 aa14.72□□□□□ -0.05
RAB5A-201ENST00000273047 UBE2D2P62837 147 aa14.72□□□□□ -0.05
RAB5A-201ENST00000273047 Q6ZSN1 163 aa14.72□□□□□ -0.05
RAB5A-201ENST00000273047 CARD19Q96LW7 228 aa14.72□□□□□ -0.05
RAB5A-201ENST00000273047 XGP55808 180 aa14.71□□□□□ -0.05
RAB5A-201ENST00000273047 CITED2Q99967 270 aaPredicted RBP14.71□□□□□ -0.05
RAB5A-201ENST00000273047 XCL2Q9UBD3 114 aa14.71□□□□□ -0.05
RAB5A-201ENST00000273047 C2CD3Q4AC94 2353 aa14.71□□□□□ -0.05
RAB5A-201ENST00000273047 TRBV6-5A0A0K0K1A5 114 aa14.71□□□□□ -0.05
RAB5A-201ENST00000273047 KRTAP1-1Q07627 177 aa14.71□□□□□ -0.05
RAB5A-201ENST00000273047 Q6ZUT4 128 aa14.71□□□□□ -0.05
RAB5A-201ENST00000273047 LINC01587Q99440 93 aa14.71□□□□□ -0.05
RAB5A-201ENST00000273047 RPL32P62910 135 aaKnown RBP14.7□□□□□ -0.06
RAB5A-201ENST00000273047 TRPT1Q86TN4 253 aaKnown RBP14.7□□□□□ -0.06
RAB5A-201ENST00000273047 ZNRF2Q8NHG8 242 aa14.7□□□□□ -0.06
RAB5A-201ENST00000273047 YAE1D1Q9NRH1 226 aa14.7□□□□□ -0.06
RAB5A-201ENST00000273047 PMVKQ15126 192 aa14.69□□□□□ -0.06
RAB5A-201ENST00000273047 KMT2BQ9UMN6 2715 aaPredicted RBP14.69□□□□□ -0.06
RAB5A-201ENST00000273047 ODF3L2Q3SX64 289 aa14.69□□□□□ -0.06
RAB5A-201ENST00000273047 CEMP1Q6PRD7 247 aaPredicted RBP14.68□□□□□ -0.06
RAB5A-201ENST00000273047 PPDPFLQ8WWR9 84 aa14.68□□□□□ -0.06
RAB5A-201ENST00000273047 CCL24O00175 119 aa14.68□□□□□ -0.06
RAB5A-201ENST00000273047 TMEM170BQ5T4T1 132 aa14.68□□□□□ -0.06
RAB5A-201ENST00000273047 TEN1Q86WV5 123 aa14.67□□□□□ -0.06
RAB5A-201ENST00000273047 NDUFA11Q86Y39 141 aa14.67□□□□□ -0.06
RAB5A-201ENST00000273047 SMR3AQ99954 134 aa14.67□□□□□ -0.06
RAB5A-201ENST00000273047 TCL1BO95988 128 aa14.67□□□□□ -0.06
RAB5A-201ENST00000273047 RNASE13Q5GAN3 156 aaKnown RBP14.67□□□□□ -0.06
RAB5A-201ENST00000273047 A8MTW9 85 aa14.66□□□□□ -0.06
RAB5A-201ENST00000273047 TSPEAR-AS2P59090 65 aa14.66□□□□□ -0.06
RAB5A-201ENST00000273047 IGHV3-64A0A075B6Q5 118 aa14.65□□□□□ -0.06
RAB5A-201ENST00000273047 I3L3M4 83 aa14.65□□□□□ -0.06
RAB5A-201ENST00000273047 TMEM86BQ8N661 226 aa14.65□□□□□ -0.06
RAB5A-201ENST00000273047 TIMM17AQ99595 171 aa14.65□□□□□ -0.06
RAB5A-201ENST00000273047 A0A0J9YY99 117 aa14.65□□□□□ -0.06
RAB5A-201ENST00000273047 LYRM7Q5U5X0 104 aa14.65□□□□□ -0.06
RAB5A-201ENST00000273047 IGHV3-38A0A0C4DH36 116 aa14.64□□□□□ -0.07
RAB5A-201ENST00000273047 M0R2P5 195 aa14.64□□□□□ -0.07
RAB5A-201ENST00000273047 PLA2G2AP14555 144 aa14.64□□□□□ -0.07
RAB5A-201ENST00000273047 LINC01006Q8NI28 216 aa14.64□□□□□ -0.07
RAB5A-201ENST00000273047 WFDC10AQ9H1F0 79 aa14.64□□□□□ -0.07
RAB5A-201ENST00000273047 C20orf203Q8NBC4 194 aa14.64□□□□□ -0.07
RAB5A-201ENST00000273047 C11orf72Q8NBR9 251 aa14.64□□□□□ -0.07
RAB5A-201ENST00000273047 TMEM141Q96I45 108 aa14.64□□□□□ -0.07
RAB5A-201ENST00000273047 SBSPONQ8IVN8 264 aa14.63□□□□□ -0.07
RAB5A-201ENST00000273047 HIVEP2P31629 2446 aa14.63□□□□□ -0.07
RAB5A-201ENST00000273047 FN1P02751 2386 aaKnown RBP14.63□□□□□ -0.07
RAB5A-201ENST00000273047 NSUN5P1Q3KNT7 163 aa14.63□□□□□ -0.07
RAB5A-201ENST00000273047 CFC1BP0CG36 223 aa14.62□□□□□ -0.07
RAB5A-201ENST00000273047 CFC1P0CG37 223 aa14.62□□□□□ -0.07
RAB5A-201ENST00000273047 RNF183Q96D59 192 aa14.62□□□□□ -0.07
RAB5A-201ENST00000273047 A8MWV9 139 aa14.62□□□□□ -0.07
RAB5A-201ENST00000273047 ZNF415Q09FC8 603 aa14.62□□□□□ -0.07
RAB5A-201ENST00000273047 VWFP04275 2813 aa14.62□□□□□ -0.07
RAB5A-201ENST00000273047 OTOGQ6ZRI0 2925 aa14.62□□□□□ -0.07
RAB5A-201ENST00000273047 TRBV20-1A0A075B6N2 111 aa14.61□□□□□ -0.07
RAB5A-201ENST00000273047 TRAV2A0A0B4J234 112 aa14.61□□□□□ -0.07
RAB5A-201ENST00000273047 STHQ8IWL8 128 aa14.61□□□□□ -0.07
RAB5A-201ENST00000273047 ERG28Q9UKR5 140 aa14.61□□□□□ -0.07
RAB5A-201ENST00000273047 IGHV3-30P01768 117 aa14.61□□□□□ -0.07
RAB5A-201ENST00000273047 IGHV3-30-5P0DP03 117 aa14.61□□□□□ -0.07
RAB5A-201ENST00000273047 VCX2Q9H322 139 aa14.61□□□□□ -0.07
RAB5A-201ENST00000273047 INSP01308 110 aa14.6□□□□□ -0.07
RAB5A-201ENST00000273047 TNFRSF18Q9Y5U5 241 aa14.6□□□□□ -0.07
RAB5A-201ENST00000273047 IGLV4-3A0A075B6K6 122 aa14.6□□□□□ -0.07
RAB5A-201ENST00000273047 A0A0J9YXV3 536 aa14.6□□□□□ -0.07
RAB5A-201ENST00000273047 HERVK_113P61574 105 aa14.6□□□□□ -0.07
RAB5A-201ENST00000273047 RHOHQ15669 191 aa14.6□□□□□ -0.07
RAB5A-201ENST00000273047 ANKRD29Q8N6D5 301 aa14.6□□□□□ -0.07
RAB5A-201ENST00000273047 C1orf158Q8N1D5 194 aa14.59□□□□□ -0.07
RAB5A-201ENST00000273047 C10orf126Q8N4M7 172 aa14.59□□□□□ -0.07
RAB5A-201ENST00000273047 FAM104AQ969W3 186 aa14.59□□□□□ -0.07
RAB5A-201ENST00000273047 J3QKU1 62 aa14.58□□□□□ -0.07
RAB5A-201ENST00000273047 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.58□□□□□ -0.08
RAB5A-201ENST00000273047 IGKV2-29A2NJV5 120 aaPredicted RBP14.58□□□□□ -0.08
RAB5A-201ENST00000273047 SCGB1C2P0DMR2 95 aa14.58□□□□□ -0.08
RAB5A-201ENST00000273047 SLC25A29Q8N8R3 303 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms