RNA–Protein interactions for RNA: ENST00000265354.5

SRF-201, Transcript of serum response factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRF, Length 4,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRF-201ENST00000265354 RHODO00212 210 aa12.92□□□□□ -0.34
SRF-201ENST00000265354 LENEPQ9Y5L5 61 aa12.92□□□□□ -0.34
SRF-201ENST00000265354 ZFAND2AQ8N6M9 145 aa12.92□□□□□ -0.34
SRF-201ENST00000265354 TRBV7-3A0A075B6L6 115 aa12.91□□□□□ -0.34
SRF-201ENST00000265354 RBMY1BA6NDE4 496 aaKnown RBP12.91□□□□□ -0.34
SRF-201ENST00000265354 RBMY1EA6NEQ0 496 aaKnown RBP12.91□□□□□ -0.34
SRF-201ENST00000265354 RBMY1DP0C7P1 496 aaKnown RBP12.91□□□□□ -0.34
SRF-201ENST00000265354 RBMY1A1P0DJD3 496 aaKnown RBP12.91□□□□□ -0.34
SRF-201ENST00000265354 RBMY1CP0DJD4 496 aa12.91□□□□□ -0.34
SRF-201ENST00000265354 RBMY1FQ15415 496 aaKnown RBP12.91□□□□□ -0.34
SRF-201ENST00000265354 IGHV4-61A0A0C4DH41 118 aa12.91□□□□□ -0.34
SRF-201ENST00000265354 CRPP02741 224 aa12.91□□□□□ -0.34
SRF-201ENST00000265354 CFAP126Q5VTH2 177 aa12.91□□□□□ -0.34
SRF-201ENST00000265354 HIST2H2BDQ6DRA6 164 aa12.91□□□□□ -0.34
SRF-201ENST00000265354 TRGV4A0A0C4DH28 118 aa12.91□□□□□ -0.34
SRF-201ENST00000265354 C10orf105Q8TEF2 133 aa12.91□□□□□ -0.34
SRF-201ENST00000265354 IGHV4-59P01825 116 aa12.9□□□□□ -0.34
SRF-201ENST00000265354 F8W735 103 aaPredicted RBP12.9□□□□□ -0.34
SRF-201ENST00000265354 BAALC-AS2P0C853 105 aa12.9□□□□□ -0.34
SRF-201ENST00000265354 RNF152Q8N8N0 203 aa12.9□□□□□ -0.34
SRF-201ENST00000265354 MRPL53Q96EL3 112 aaKnown RBP12.9□□□□□ -0.34
SRF-201ENST00000265354 EPG5Q9HCE0 2579 aa12.9□□□□□ -0.35
SRF-201ENST00000265354 ATOX1O00244 68 aa12.89□□□□□ -0.35
SRF-201ENST00000265354 LEPROTO15243 131 aa12.89□□□□□ -0.35
SRF-201ENST00000265354 IGHV3-30-3P0DP02 117 aa12.89□□□□□ -0.35
SRF-201ENST00000265354 RPL36AP83881 106 aaKnown RBP12.89□□□□□ -0.35
SRF-201ENST00000265354 APRG1Q8IVJ8 170 aa12.89□□□□□ -0.35
SRF-201ENST00000265354 RPL36ALQ969Q0 106 aaKnown RBP12.89□□□□□ -0.35
SRF-201ENST00000265354 RPL35AP18077 110 aaKnown RBP12.89□□□□□ -0.35
SRF-201ENST00000265354 CDSNQ15517 529 aa12.89□□□□□ -0.35
SRF-201ENST00000265354 UQCRQO14949 82 aa12.89□□□□□ -0.35
SRF-201ENST00000265354 NDUFA7O95182 113 aa12.89□□□□□ -0.35
SRF-201ENST00000265354 NRGNQ92686 78 aa12.89□□□□□ -0.35
SRF-201ENST00000265354 CRIP2P52943 208 aaPredicted RBP12.89□□□□□ -0.35
SRF-201ENST00000265354 PROK1P58294 105 aa12.88□□□□□ -0.35
SRF-201ENST00000265354 FAM19A5Q7Z5A7 132 aaPredicted RBP12.88□□□□□ -0.35
SRF-201ENST00000265354 ICOSQ9Y6W8 199 aa12.88□□□□□ -0.35
SRF-201ENST00000265354 ASPMQ8IZT6 3477 aa12.88□□□□□ -0.35
SRF-201ENST00000265354 NFE4Q86UQ8 179 aa12.88□□□□□ -0.35
SRF-201ENST00000265354 SLC25A29Q8N8R3 303 aa12.88□□□□□ -0.35
SRF-201ENST00000265354 RAI1Q7Z5J4 1906 aaPredicted RBP12.87□□□□□ -0.35
SRF-201ENST00000265354 NXPH4O95158 308 aa12.87□□□□□ -0.35
SRF-201ENST00000265354 SOCS3O14543 225 aa12.87□□□□□ -0.35
SRF-201ENST00000265354 TRBV10-2A0A0K0K1G8 114 aa12.87□□□□□ -0.35
SRF-201ENST00000265354 ODF3BA8MYP8 253 aa12.87□□□□□ -0.35
SRF-201ENST00000265354 RHOHQ15669 191 aa12.87□□□□□ -0.35
SRF-201ENST00000265354 MSMBP08118 114 aa12.86□□□□□ -0.35
SRF-201ENST00000265354 HTN3P15516 51 aa12.86□□□□□ -0.35
SRF-201ENST00000265354 ADORA2A-AS1P86434 159 aa12.86□□□□□ -0.35
SRF-201ENST00000265354 DSCR8Q96T75 97 aa12.86□□□□□ -0.35
SRF-201ENST00000265354 LAMTOR3Q9UHA4 124 aa12.86□□□□□ -0.35
SRF-201ENST00000265354 C10orf99Q6UWK7 81 aa12.86□□□□□ -0.35
SRF-201ENST00000265354 SIRPDQ9H106 197 aa12.86□□□□□ -0.35
SRF-201ENST00000265354 TNFRSF13BO14836 293 aaPredicted RBP12.86□□□□□ -0.35
SRF-201ENST00000265354 PF4P02776 101 aa12.86□□□□□ -0.35
SRF-201ENST00000265354 EDN2P20800 178 aa12.86□□□□□ -0.35
SRF-201ENST00000265354 C3orf22Q8N5N4 141 aa12.86□□□□□ -0.35
SRF-201ENST00000265354 B4DSR2 109 aa12.85□□□□□ -0.35
SRF-201ENST00000265354 C6orf226Q5I0X4 101 aa12.85□□□□□ -0.35
SRF-201ENST00000265354 ZNF580Q9UK33 172 aa12.85□□□□□ -0.35
SRF-201ENST00000265354 RNASE3P12724 160 aaKnown RBP12.85□□□□□ -0.35
SRF-201ENST00000265354 Q6ZSV7 163 aa12.85□□□□□ -0.35
SRF-201ENST00000265354 C20orf203Q8NBC4 194 aa12.85□□□□□ -0.35
SRF-201ENST00000265354 TIMM17AQ99595 171 aa12.85□□□□□ -0.35
SRF-201ENST00000265354 CLPSL1A2RUU4 121 aa12.85□□□□□ -0.35
SRF-201ENST00000265354 DEFB130BP0DP73 79 aa12.85□□□□□ -0.35
SRF-201ENST00000265354 DEFB130AP0DP74 79 aa12.85□□□□□ -0.35
SRF-201ENST00000265354 PCSK5Q92824 1860 aa12.84□□□□□ -0.35
SRF-201ENST00000265354 CRLF1O75462 422 aa12.84□□□□□ -0.35
SRF-201ENST00000265354 NSUN5P1Q3KNT7 163 aa12.84□□□□□ -0.35
SRF-201ENST00000265354 CSDC2Q9Y534 153 aaKnown RBP12.84□□□□□ -0.35
SRF-201ENST00000265354 V9GYY9 64 aa12.84□□□□□ -0.35
SRF-201ENST00000265354 C20orf197Q8N268 126 aa12.84□□□□□ -0.35
SRF-201ENST00000265354 DNAJC30Q96LL9 226 aa12.84□□□□□ -0.35
SRF-201ENST00000265354 SDIM1Q6ZPB5 146 aa12.83□□□□□ -0.35
SRF-201ENST00000265354 A0A0J9YXY3 114 aa12.83□□□□□ -0.36
SRF-201ENST00000265354 IGHV3-33P01772 117 aa12.83□□□□□ -0.36
SRF-201ENST00000265354 CDIP1Q9H305 208 aa12.83□□□□□ -0.36
SRF-201ENST00000265354 CNFNQ9BYD5 112 aa12.82□□□□□ -0.36
SRF-201ENST00000265354 ZMAT4Q9H898 229 aa12.82□□□□□ -0.36
SRF-201ENST00000265354 TRIAP1O43715 76 aa12.82□□□□□ -0.36
SRF-201ENST00000265354 DEFB112Q30KQ8 113 aa12.82□□□□□ -0.36
SRF-201ENST00000265354 CLPSL2Q6UWE3 100 aa12.82□□□□□ -0.36
SRF-201ENST00000265354 A0A096LPF7 62 aa12.82□□□□□ -0.36
SRF-201ENST00000265354 IGHV3-30P01768 117 aa12.82□□□□□ -0.36
SRF-201ENST00000265354 IGHV3-30-5P0DP03 117 aa12.82□□□□□ -0.36
SRF-201ENST00000265354 Q9HAA7 133 aa12.82□□□□□ -0.36
SRF-201ENST00000265354 U3KQE9 123 aa12.82□□□□□ -0.36
SRF-201ENST00000265354 ZNF22P17026 224 aaPredicted RBP12.81□□□□□ -0.36
SRF-201ENST00000265354 SLURP1P55000 103 aa12.81□□□□□ -0.36
SRF-201ENST00000265354 TSPEAR-AS2P59090 65 aa12.81□□□□□ -0.36
SRF-201ENST00000265354 MPLKIPQ8TAP9 179 aa12.81□□□□□ -0.36
SRF-201ENST00000265354 PIFOQ8TCI5 191 aa12.81□□□□□ -0.36
SRF-201ENST00000265354 A0A0B4J2C4 111 aa12.81□□□□□ -0.36
SRF-201ENST00000265354 LGALS9O00182 355 aa12.8□□□□□ -0.36
SRF-201ENST00000265354 IGHV4-30-2A0A087WSY4 118 aa12.8□□□□□ -0.36
SRF-201ENST00000265354 RNF223E7ERA6 249 aa12.8□□□□□ -0.36
SRF-201ENST00000265354 IGLV2-18A0A075B6J9 118 aa12.79□□□□□ -0.36
SRF-201ENST00000265354 INSP01308 110 aa12.79□□□□□ -0.36
SRF-201ENST00000265354 LMO4P61968 165 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms