RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 RNF138Q8WVD3 245 aa13.41□□□□□ -0.26
NOTCH3-201ENST00000263388 IGHV3-30P01768 117 aa13.4□□□□□ -0.26
NOTCH3-201ENST00000263388 IGHV3-33P01772 117 aa13.4□□□□□ -0.26
NOTCH3-201ENST00000263388 IGHV3-30-3P0DP02 117 aa13.4□□□□□ -0.26
NOTCH3-201ENST00000263388 IGHV3-30-5P0DP03 117 aa13.4□□□□□ -0.26
NOTCH3-201ENST00000263388 MDFICQ9P1T7 246 aa13.4□□□□□ -0.26
NOTCH3-201ENST00000263388 MIAQ16674 131 aa13.39□□□□□ -0.27
NOTCH3-201ENST00000263388 TRBV10-1A0A0K0K1A3 114 aa13.39□□□□□ -0.27
NOTCH3-201ENST00000263388 COX7BP24311 80 aa13.39□□□□□ -0.27
NOTCH3-201ENST00000263388 SPAG11BQ08648 103 aa13.39□□□□□ -0.27
NOTCH3-201ENST00000263388 C14orf177Q52M58 125 aa13.39□□□□□ -0.27
NOTCH3-201ENST00000263388 NDUFA11Q86Y39 141 aa13.38□□□□□ -0.27
NOTCH3-201ENST00000263388 MIR7-3HGQ8N6C7 128 aa13.38□□□□□ -0.27
NOTCH3-201ENST00000263388 ODF3L1Q8IXM7 274 aa13.38□□□□□ -0.27
NOTCH3-201ENST00000263388 TRAV26-1A0A087WT03 109 aa13.38□□□□□ -0.27
NOTCH3-201ENST00000263388 PIEZO1Q92508 2521 aa13.37□□□□□ -0.27
NOTCH3-201ENST00000263388 C19orf71A6NCJ1 209 aa13.36□□□□□ -0.27
NOTCH3-201ENST00000263388 F8W735 103 aaPredicted RBP13.36□□□□□ -0.27
NOTCH3-201ENST00000263388 ANKRD17O75179 2603 aaKnown RBP13.36□□□□□ -0.27
NOTCH3-201ENST00000263388 FANCD2OSQ96PS1 177 aa13.36□□□□□ -0.27
NOTCH3-201ENST00000263388 IGKV2D-26A0A0A0MRZ7 120 aa13.36□□□□□ -0.27
NOTCH3-201ENST00000263388 ABCA12Q86UK0 2595 aa13.36□□□□□ -0.27
NOTCH3-201ENST00000263388 PRAC2D3DTV9 90 aa13.36□□□□□ -0.27
NOTCH3-201ENST00000263388 COL4A3Q01955 1670 aa13.35□□□□□ -0.27
NOTCH3-201ENST00000263388 PLA2G2EQ9NZK7 142 aa13.35□□□□□ -0.27
NOTCH3-201ENST00000263388 C10orf105Q8TEF2 133 aa13.35□□□□□ -0.27
NOTCH3-201ENST00000263388 IGLV1-47P01700 117 aa13.35□□□□□ -0.27
NOTCH3-201ENST00000263388 INSL3P51460 131 aa13.35□□□□□ -0.27
NOTCH3-201ENST00000263388 SPATA12Q7Z6I5 190 aa13.35□□□□□ -0.27
NOTCH3-201ENST00000263388 RNASE8Q8TDE3 154 aaKnown RBP13.35□□□□□ -0.27
NOTCH3-201ENST00000263388 ODF3Q96PU9 254 aa13.34□□□□□ -0.27
NOTCH3-201ENST00000263388 LYPD6Q86Y78 171 aa13.33□□□□□ -0.27
NOTCH3-201ENST00000263388 MUC22E2RYF6 1773 aaPredicted RBP13.33□□□□□ -0.28
NOTCH3-201ENST00000263388 NAV2Q8IVL1 2488 aa13.33□□□□□ -0.28
NOTCH3-201ENST00000263388 E7EUB6 86 aa13.33□□□□□ -0.28
NOTCH3-201ENST00000263388 KLK12Q9UKR0 248 aa13.33□□□□□ -0.28
NOTCH3-201ENST00000263388 HIST2H2BDQ6DRA6 164 aa13.32□□□□□ -0.28
NOTCH3-201ENST00000263388 A0A0J9YX75 114 aa13.32□□□□□ -0.28
NOTCH3-201ENST00000263388 TCL1BO95988 128 aa13.32□□□□□ -0.28
NOTCH3-201ENST00000263388 DEFB135Q30KP9 77 aa13.32□□□□□ -0.28
NOTCH3-201ENST00000263388 KLK5Q9Y337 293 aaPredicted RBP13.32□□□□□ -0.28
NOTCH3-201ENST00000263388 H7C423 109 aa13.32□□□□□ -0.28
NOTCH3-201ENST00000263388 PRO0255Q9UI72 69 aa13.31□□□□□ -0.28
NOTCH3-201ENST00000263388 C20orf203Q8NBC4 194 aa13.31□□□□□ -0.28
NOTCH3-201ENST00000263388 A0A0U1RQV1 116 aa13.31□□□□□ -0.28
NOTCH3-201ENST00000263388 A0A1B0GXF2 115 aa13.3□□□□□ -0.28
NOTCH3-201ENST00000263388 A6NED7 52 aa13.3□□□□□ -0.28
NOTCH3-201ENST00000263388 SDIM1Q6ZPB5 146 aa13.3□□□□□ -0.28
NOTCH3-201ENST00000263388 IGF2RP11717 2491 aa13.29□□□□□ -0.28
NOTCH3-201ENST00000263388 TEX49A0A1B0GTD5 131 aa13.29□□□□□ -0.28
NOTCH3-201ENST00000263388 MYCNOSP40205 109 aa13.29□□□□□ -0.28
NOTCH3-201ENST00000263388 DAZAP2Q15038 168 aaPredicted RBP13.29□□□□□ -0.28
NOTCH3-201ENST00000263388 ZFP36P26651 326 aaKnown RBP13.28□□□□□ -0.28
NOTCH3-201ENST00000263388 NFE4Q86UQ8 179 aa13.27□□□□□ -0.28
NOTCH3-201ENST00000263388 Q8N7P7 452 aa13.27□□□□□ -0.28
NOTCH3-201ENST00000263388 COL27A1Q8IZC6 1860 aaPredicted RBP13.27□□□□□ -0.28
NOTCH3-201ENST00000263388 UFSP1Q6NVU6 142 aa13.27□□□□□ -0.28
NOTCH3-201ENST00000263388 ESM1Q9NQ30 184 aa13.27□□□□□ -0.28
NOTCH3-201ENST00000263388 ADORA2A-AS1P86434 159 aa13.27□□□□□ -0.29
NOTCH3-201ENST00000263388 C20orf197Q8N268 126 aa13.27□□□□□ -0.29
NOTCH3-201ENST00000263388 UNQ9165/PRO28630Q6UXU0 137 aa13.27□□□□□ -0.29
NOTCH3-201ENST00000263388 PIK3CD-AS1Q5SR53 167 aa13.27□□□□□ -0.29
NOTCH3-201ENST00000263388 C11orf1Q9H5F2 150 aa13.27□□□□□ -0.29
NOTCH3-201ENST00000263388 LYRM9A8MSI8 78 aa13.26□□□□□ -0.29
NOTCH3-201ENST00000263388 SMAD5-AS1Q9Y6J3 95 aa13.26□□□□□ -0.29
NOTCH3-201ENST00000263388 ZFAND2AQ8N6M9 145 aa13.26□□□□□ -0.29
NOTCH3-201ENST00000263388 TTTY13Q9BZ97 58 aa13.25□□□□□ -0.29
NOTCH3-201ENST00000263388 FBXL19-AS1Q494R0 122 aa13.25□□□□□ -0.29
NOTCH3-201ENST00000263388 LINC00574Q9H8X3 128 aa13.25□□□□□ -0.29
NOTCH3-201ENST00000263388 NCOR2Q9Y618 2525 aa13.25□□□□□ -0.29
NOTCH3-201ENST00000263388 ANKRD11Q6UB99 2663 aaPredicted RBP13.25□□□□□ -0.29
NOTCH3-201ENST00000263388 IGLC6P0CF74 106 aa13.25□□□□□ -0.29
NOTCH3-201ENST00000263388 A0A0J9YXY3 114 aa13.24□□□□□ -0.29
NOTCH3-201ENST00000263388 MAP6D1Q9H9H5 199 aa13.24□□□□□ -0.29
NOTCH3-201ENST00000263388 WT1P19544 449 aaPredicted RBP13.24□□□□□ -0.29
NOTCH3-201ENST00000263388 IMUPQ9GZP8 106 aa13.24□□□□□ -0.29
NOTCH3-201ENST00000263388 IGKV1D-37A0A075B6S9 117 aa13.23□□□□□ -0.29
NOTCH3-201ENST00000263388 P0C879 139 aa13.23□□□□□ -0.29
NOTCH3-201ENST00000263388 CENPFP49454 3210 aa13.23□□□□□ -0.29
NOTCH3-201ENST00000263388 SERP1Q9Y6X1 66 aa13.23□□□□□ -0.29
NOTCH3-201ENST00000263388 ENHOQ6UWT2 76 aa13.23□□□□□ -0.29
NOTCH3-201ENST00000263388 NDUFA7O95182 113 aa13.23□□□□□ -0.29
NOTCH3-201ENST00000263388 SIRPDQ9H106 197 aa13.23□□□□□ -0.29
NOTCH3-201ENST00000263388 WFDC10BQ8IUB3 73 aa13.22□□□□□ -0.29
NOTCH3-201ENST00000263388 IL17DQ8TAD2 202 aa13.22□□□□□ -0.29
NOTCH3-201ENST00000263388 SMIM9A6NGZ8 99 aa13.22□□□□□ -0.29
NOTCH3-201ENST00000263388 MLST8Q9BVC4 326 aa13.22□□□□□ -0.29
NOTCH3-201ENST00000263388 EP400Q96L91 3159 aa13.21□□□□□ -0.29
NOTCH3-201ENST00000263388 LINC00269Q8N2A0 174 aa13.21□□□□□ -0.29
NOTCH3-201ENST00000263388 C20orf173Q96LM9 149 aa13.21□□□□□ -0.3
NOTCH3-201ENST00000263388 NEXN-AS1Q8NBZ9 246 aa13.2□□□□□ -0.3
NOTCH3-201ENST00000263388 MT-ATP8P03928 68 aa13.2□□□□□ -0.3
NOTCH3-201ENST00000263388 REG3AQ06141 175 aa13.2□□□□□ -0.3
NOTCH3-201ENST00000263388 DEFB4AO15263 64 aa13.19□□□□□ -0.3
NOTCH3-201ENST00000263388 PTH2Q96A98 100 aa13.19□□□□□ -0.3
NOTCH3-201ENST00000263388 CCDC140Q96MF4 163 aa13.19□□□□□ -0.3
NOTCH3-201ENST00000263388 USP9XQ93008 2570 aaPredicted RBP13.19□□□□□ -0.3
NOTCH3-201ENST00000263388 LINC00467Q9BRT7 94 aa13.19□□□□□ -0.3
NOTCH3-201ENST00000263388 DEFB1P60022 68 aa13.19□□□□□ -0.3
NOTCH3-201ENST00000263388 FAM19A3Q7Z5A8 133 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms