RNA–Protein interactions for RNA: ENST00000262795.5

SHANK3-201, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS P5 TSL 5 BASIC

Gene SHANK3, Length 7,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-201ENST00000262795 CFC1P0CG37 223 aa12.02□□□□□ -0.48
SHANK3-201ENST00000262795 NDUFV3P56181 108 aaKnown RBP12.02□□□□□ -0.48
SHANK3-201ENST00000262795 UBE2D2P62837 147 aa12.02□□□□□ -0.49
SHANK3-201ENST00000262795 DEFB114Q30KQ6 69 aa12.02□□□□□ -0.49
SHANK3-201ENST00000262795 TTTY13Q9BZ97 58 aa12.02□□□□□ -0.49
SHANK3-201ENST00000262795 E7EUB6 86 aa12.01□□□□□ -0.49
SHANK3-201ENST00000262795 LINC01006Q8NI28 216 aa12.01□□□□□ -0.49
SHANK3-201ENST00000262795 CLUHP3Q96NS8 147 aa12.01□□□□□ -0.49
SHANK3-201ENST00000262795 FRMD6-AS1P0C7T7 363 aa12.01□□□□□ -0.49
SHANK3-201ENST00000262795 TP73-AS1Q9UF72 201 aa12.01□□□□□ -0.49
SHANK3-201ENST00000262795 DCANP1Q8TF63 244 aa12.01□□□□□ -0.49
SHANK3-201ENST00000262795 ODF1Q14990 250 aa12□□□□□ -0.49
SHANK3-201ENST00000262795 PTPN13Q12923 2485 aa12□□□□□ -0.49
SHANK3-201ENST00000262795 WNK1Q9H4A3 2382 aa12□□□□□ -0.49
SHANK3-201ENST00000262795 IGKV2-28A0A075B6P5 120 aa12□□□□□ -0.49
SHANK3-201ENST00000262795 IGKV2D-28P01615 120 aa12□□□□□ -0.49
SHANK3-201ENST00000262795 MSMPQ1L6U9 139 aa12□□□□□ -0.49
SHANK3-201ENST00000262795 BBC3Q96PG8 261 aaPredicted RBP12□□□□□ -0.49
SHANK3-201ENST00000262795 KPRPQ5T749 579 aaPredicted RBP12□□□□□ -0.49
SHANK3-201ENST00000262795 K7EMT4 169 aa12□□□□□ -0.49
SHANK3-201ENST00000262795 CHCHD10Q8WYQ3 142 aaPredicted RBP11.99□□□□□ -0.49
SHANK3-201ENST00000262795 FXYD2P54710 66 aa11.99□□□□□ -0.49
SHANK3-201ENST00000262795 IGKV2D-26A0A0A0MRZ7 120 aa11.99□□□□□ -0.49
SHANK3-201ENST00000262795 IGLV5-52A0A0A0MRZ9 124 aa11.99□□□□□ -0.49
SHANK3-201ENST00000262795 CLEC2BQ92478 149 aa11.99□□□□□ -0.49
SHANK3-201ENST00000262795 ZNF747Q9BV97 191 aa11.99□□□□□ -0.49
SHANK3-201ENST00000262795 FSHBP01225 129 aa11.99□□□□□ -0.49
SHANK3-201ENST00000262795 NFE4Q86UQ8 179 aa11.99□□□□□ -0.49
SHANK3-201ENST00000262795 MIR7-3HGQ8N6C7 128 aa11.99□□□□□ -0.49
SHANK3-201ENST00000262795 C22orf34Q6ZV56 151 aa11.98□□□□□ -0.49
SHANK3-201ENST00000262795 FAM240AA0A1B0GVK7 77 aa11.98□□□□□ -0.49
SHANK3-201ENST00000262795 RPL37AP8A6NKH3 93 aa11.98□□□□□ -0.49
SHANK3-201ENST00000262795 DSCAML1Q8TD84 2053 aa11.98□□□□□ -0.49
SHANK3-201ENST00000262795 TRBV6-1A0A0K0K1D8 114 aa11.98□□□□□ -0.49
SHANK3-201ENST00000262795 LYRM9A8MSI8 78 aa11.98□□□□□ -0.49
SHANK3-201ENST00000262795 C3orf22Q8N5N4 141 aa11.98□□□□□ -0.49
SHANK3-201ENST00000262795 FAM236DA0A1B0GTK5 79 aa11.98□□□□□ -0.49
SHANK3-201ENST00000262795 FAM236CP0DP71 79 aa11.98□□□□□ -0.49
SHANK3-201ENST00000262795 XAGE1AQ9HD64 81 aa11.97□□□□□ -0.49
SHANK3-201ENST00000262795 U3KQK5 164 aa11.97□□□□□ -0.49
SHANK3-201ENST00000262795 C1orf195Q5TG92 126 aa11.97□□□□□ -0.49
SHANK3-201ENST00000262795 A0A0J9YX75 114 aa11.97□□□□□ -0.49
SHANK3-201ENST00000262795 IGHV4-30-4P0DP06 118 aa11.97□□□□□ -0.49
SHANK3-201ENST00000262795 PTH2Q96A98 100 aa11.97□□□□□ -0.49
SHANK3-201ENST00000262795 PRM2P04554 102 aa11.96□□□□□ -0.49
SHANK3-201ENST00000262795 C1orf147Q96MC9 270 aaPredicted RBP11.96□□□□□ -0.49
SHANK3-201ENST00000262795 COX7BP24311 80 aa11.96□□□□□ -0.49
SHANK3-201ENST00000262795 Q6ZUT4 128 aa11.96□□□□□ -0.5
SHANK3-201ENST00000262795 C11orf52Q96A22 123 aa11.96□□□□□ -0.5
SHANK3-201ENST00000262795 FREM1Q5H8C1 2179 aa11.96□□□□□ -0.5
SHANK3-201ENST00000262795 MIFP14174 115 aa11.96□□□□□ -0.5
SHANK3-201ENST00000262795 FBXL19-AS1Q494R0 122 aa11.96□□□□□ -0.5
SHANK3-201ENST00000262795 CCDC140Q96MF4 163 aa11.94□□□□□ -0.5
SHANK3-201ENST00000262795 RETNLBQ9BQ08 111 aa11.94□□□□□ -0.5
SHANK3-201ENST00000262795 TRBV10-1A0A0K0K1A3 114 aa11.94□□□□□ -0.5
SHANK3-201ENST00000262795 MED12LQ86YW9 2145 aa11.94□□□□□ -0.5
SHANK3-201ENST00000262795 WFDC10BQ8IUB3 73 aa11.94□□□□□ -0.5
SHANK3-201ENST00000262795 WI2-2373I1.2A0A1W2PRP0 233 aa11.94□□□□□ -0.5
SHANK3-201ENST00000262795 SCXQ7RTU7 201 aa11.94□□□□□ -0.5
SHANK3-201ENST00000262795 TMEM89A2RUT3 159 aa11.94□□□□□ -0.5
SHANK3-201ENST00000262795 NDUFC2-KCTD14E9PQ53 114 aa11.93□□□□□ -0.5
SHANK3-201ENST00000262795 CDSNQ15517 529 aa11.93□□□□□ -0.5
SHANK3-201ENST00000262795 PRRC2AP48634 2157 aaKnown RBP11.92□□□□□ -0.5
SHANK3-201ENST00000262795 CIRBP-AS1Q8TBR5 109 aa11.92□□□□□ -0.5
SHANK3-201ENST00000262795 LENEPQ9Y5L5 61 aa11.92□□□□□ -0.5
SHANK3-201ENST00000262795 GDF5OSQ5U4N7 250 aa11.92□□□□□ -0.5
SHANK3-201ENST00000262795 SDIM1Q6ZPB5 146 aa11.92□□□□□ -0.5
SHANK3-201ENST00000262795 LOC100131303A0A0U1RQF7 123 aa11.92□□□□□ -0.5
SHANK3-201ENST00000262795 A6NED7 52 aa11.92□□□□□ -0.5
SHANK3-201ENST00000262795 Q6ZS46 218 aa11.92□□□□□ -0.5
SHANK3-201ENST00000262795 ZNF702PQ9H963 129 aa11.92□□□□□ -0.5
SHANK3-201ENST00000262795 UPK3BQ9BT76 320 aa11.92□□□□□ -0.5
SHANK3-201ENST00000262795 TEN1Q86WV5 123 aa11.91□□□□□ -0.5
SHANK3-201ENST00000262795 ZFAND2AQ8N6M9 145 aa11.91□□□□□ -0.5
SHANK3-201ENST00000262795 TRBV10-2A0A0K0K1G8 114 aa11.91□□□□□ -0.5
SHANK3-201ENST00000262795 PROK1P58294 105 aa11.91□□□□□ -0.5
SHANK3-201ENST00000262795 C20orf197Q8N268 126 aa11.91□□□□□ -0.5
SHANK3-201ENST00000262795 K7ERS5 55 aa11.91□□□□□ -0.5
SHANK3-201ENST00000262795 BDP1A6H8Y1 2624 aa11.91□□□□□ -0.5
SHANK3-201ENST00000262795 SPRY4Q9C004 299 aa11.9□□□□□ -0.5
SHANK3-201ENST00000262795 X6R8D5 127 aa11.9□□□□□ -0.5
SHANK3-201ENST00000262795 PLAC8L1A1L4L8 177 aa11.9□□□□□ -0.5
SHANK3-201ENST00000262795 A4D1N5 150 aa11.9□□□□□ -0.5
SHANK3-201ENST00000262795 KIAA1549Q9HCM3 1950 aa11.9□□□□□ -0.5
SHANK3-201ENST00000262795 SMIM9A6NGZ8 99 aa11.89□□□□□ -0.51
SHANK3-201ENST00000262795 COL5A1P20908 1838 aaPredicted RBP11.89□□□□□ -0.51
SHANK3-201ENST00000262795 CXCL5P42830 114 aa11.89□□□□□ -0.51
SHANK3-201ENST00000262795 PATE2Q6UY27 113 aa11.89□□□□□ -0.51
SHANK3-201ENST00000262795 C20orf173Q96LM9 149 aa11.89□□□□□ -0.51
SHANK3-201ENST00000262795 LY6LH3BQJ8 138 aa11.89□□□□□ -0.51
SHANK3-201ENST00000262795 IGLV1-47P01700 117 aa11.89□□□□□ -0.51
SHANK3-201ENST00000262795 MT-ATP8P03928 68 aa11.89□□□□□ -0.51
SHANK3-201ENST00000262795 Q8N976 141 aa11.88□□□□□ -0.51
SHANK3-201ENST00000262795 SNURFQ9Y675 71 aa11.88□□□□□ -0.51
SHANK3-201ENST00000262795 KIAA1549LQ6ZVL6 1849 aa11.88□□□□□ -0.51
SHANK3-201ENST00000262795 LGALS9O00182 355 aa11.87□□□□□ -0.51
SHANK3-201ENST00000262795 SPATA12Q7Z6I5 190 aa11.87□□□□□ -0.51
SHANK3-201ENST00000262795 EXPH5Q8NEV8 1989 aa11.86□□□□□ -0.51
SHANK3-201ENST00000262795 MED14OSP0DP75 135 aa11.86□□□□□ -0.51
SHANK3-201ENST00000262795 LINC00467Q9BRT7 94 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms