RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 IGIPA6NJ69 53 aa3.53□□□□□ -1.84
USP44-201ENST00000258499 KLLNB2CW77 178 aa3.53□□□□□ -1.84
USP44-201ENST00000258499 K7EMT4 169 aa3.53□□□□□ -1.84
USP44-201ENST00000258499 M0QY20 66 aa3.53□□□□□ -1.84
USP44-201ENST00000258499 RHODO00212 210 aa3.53□□□□□ -1.84
USP44-201ENST00000258499 LEPROTO15243 131 aa3.53□□□□□ -1.84
USP44-201ENST00000258499 MT-ATP8P03928 68 aa3.53□□□□□ -1.84
USP44-201ENST00000258499 ZFAND6Q6FIF0 208 aa3.53□□□□□ -1.84
USP44-201ENST00000258499 DCANP1Q8TF63 244 aa3.53□□□□□ -1.84
USP44-201ENST00000258499 ZNF580Q9UK33 172 aa3.53□□□□□ -1.84
USP44-201ENST00000258499 SVEP1Q4LDE5 3571 aa3.53□□□□□ -1.84
USP44-201ENST00000258499 SOCS3O14543 225 aa3.53□□□□□ -1.85
USP44-201ENST00000258499 IGHV3-30-3P0DP02 117 aa3.53□□□□□ -1.85
USP44-201ENST00000258499 SLC25A29Q8N8R3 303 aa3.53□□□□□ -1.85
USP44-201ENST00000258499 IGLV4-69A0A075B6H9 119 aa3.52□□□□□ -1.85
USP44-201ENST00000258499 GAGE12JA6NER3 117 aa3.52□□□□□ -1.85
USP44-201ENST00000258499 CRYGDP07320 174 aa3.52□□□□□ -1.85
USP44-201ENST00000258499 ZNF22P17026 224 aaPredicted RBP3.52□□□□□ -1.85
USP44-201ENST00000258499 GAGE4Q13068 117 aa3.52□□□□□ -1.85
USP44-201ENST00000258499 GAGE5Q13069 117 aa3.52□□□□□ -1.85
USP44-201ENST00000258499 PRIMA1Q86XR5 153 aa3.52□□□□□ -1.85
USP44-201ENST00000258499 TMEM61Q8N0U2 210 aa3.52□□□□□ -1.85
USP44-201ENST00000258499 TRBV27A0A0K0K1C4 114 aa3.52□□□□□ -1.85
USP44-201ENST00000258499 K7EQG2 157 aa3.52□□□□□ -1.85
USP44-201ENST00000258499 TSHBP01222 138 aa3.52□□□□□ -1.85
USP44-201ENST00000258499 PRB1P04280 392 aa3.52□□□□□ -1.85
USP44-201ENST00000258499 IGLV4-3A0A075B6K6 122 aa3.52□□□□□ -1.85
USP44-201ENST00000258499 INSP01308 110 aa3.52□□□□□ -1.85
USP44-201ENST00000258499 IGHV3-30P01768 117 aa3.52□□□□□ -1.85
USP44-201ENST00000258499 IGHV3-30-5P0DP03 117 aa3.52□□□□□ -1.85
USP44-201ENST00000258499 RPL35AP18077 110 aaKnown RBP3.52□□□□□ -1.85
USP44-201ENST00000258499 CFAP126Q5VTH2 177 aa3.52□□□□□ -1.85
USP44-201ENST00000258499 OR13C6PQ8NH95 151 aa3.52□□□□□ -1.85
USP44-201ENST00000258499 C11orf68Q9H3H3 251 aaKnown RBP3.52□□□□□ -1.85
USP44-201ENST00000258499 VPREB3Q9UKI3 123 aa3.52□□□□□ -1.85
USP44-201ENST00000258499 TRBV7-9A0A0J9YWB2 115 aa3.51□□□□□ -1.85
USP44-201ENST00000258499 LGALS9O00182 355 aa3.51□□□□□ -1.85
USP44-201ENST00000258499 RPL36AP83881 106 aaKnown RBP3.51□□□□□ -1.85
USP44-201ENST00000258499 C18orf65Q6ZTR6 163 aa3.51□□□□□ -1.85
USP44-201ENST00000258499 RPL36ALQ969Q0 106 aaKnown RBP3.51□□□□□ -1.85
USP44-201ENST00000258499 DCHS2Q6V1P9 2916 aa3.51□□□□□ -1.85
USP44-201ENST00000258499 A0A0J9YXY3 114 aa3.51□□□□□ -1.85
USP44-201ENST00000258499 LINC01546A6NGU7 62 aa3.51□□□□□ -1.85
USP44-201ENST00000258499 H3BMM0 161 aa3.51□□□□□ -1.85
USP44-201ENST00000258499 ELANEP08246 267 aa3.51□□□□□ -1.85
USP44-201ENST00000258499 GATA3P23771 443 aa3.51□□□□□ -1.85
USP44-201ENST00000258499 UBE2D1P51668 147 aa3.51□□□□□ -1.85
USP44-201ENST00000258499 LINC01620Q4KN68 170 aa3.51□□□□□ -1.85
USP44-201ENST00000258499 Q6ZUT4 128 aa3.51□□□□□ -1.85
USP44-201ENST00000258499 CLEC2BQ92478 149 aa3.51□□□□□ -1.85
USP44-201ENST00000258499 UBE2WQ96B02 151 aa3.51□□□□□ -1.85
USP44-201ENST00000258499 Q9H8V8 135 aa3.51□□□□□ -1.85
USP44-201ENST00000258499 YAE1D1Q9NRH1 226 aa3.51□□□□□ -1.85
USP44-201ENST00000258499 TRAV26-1A0A087WT03 109 aa3.51□□□□□ -1.85
USP44-201ENST00000258499 LINC01619G3V211 115 aa3.51□□□□□ -1.85
USP44-201ENST00000258499 IGLV1-40P01703 118 aa3.51□□□□□ -1.85
USP44-201ENST00000258499 PSMB8P28062 276 aa3.51□□□□□ -1.85
USP44-201ENST00000258499 DSCR9P59020 149 aa3.51□□□□□ -1.85
USP44-201ENST00000258499 NFE4Q86UQ8 179 aa3.51□□□□□ -1.85
USP44-201ENST00000258499 TMEM101Q96IK0 257 aa3.51□□□□□ -1.85
USP44-201ENST00000258499 CARD19Q96LW7 228 aa3.51□□□□□ -1.85
USP44-201ENST00000258499 SPENQ96T58 3664 aaKnown RBP3.5□□□□□ -1.85
USP44-201ENST00000258499 TRGV4A0A0C4DH28 118 aa3.5□□□□□ -1.85
USP44-201ENST00000258499 TMEM223A0PJW6 202 aa3.5□□□□□ -1.85
USP44-201ENST00000258499 CRIP2P52943 208 aaPredicted RBP3.5□□□□□ -1.85
USP44-201ENST00000258499 CHCHD5Q9BSY4 110 aa3.5□□□□□ -1.85
USP44-201ENST00000258499 KIF25-AS1Q9Y6Z4 181 aa3.5□□□□□ -1.85
USP44-201ENST00000258499 TEX49A0A1B0GTD5 131 aa3.5□□□□□ -1.85
USP44-201ENST00000258499 DNAL4O96015 105 aa3.5□□□□□ -1.85
USP44-201ENST00000258499 IGHV3-33P01772 117 aa3.5□□□□□ -1.85
USP44-201ENST00000258499 CRYBA4P53673 196 aa3.5□□□□□ -1.85
USP44-201ENST00000258499 XGP55808 180 aa3.5□□□□□ -1.85
USP44-201ENST00000258499 LINC00315P59091 139 aa3.5□□□□□ -1.85
USP44-201ENST00000258499 Q6ZSV7 163 aa3.5□□□□□ -1.85
USP44-201ENST00000258499 MUC4Q99102 2169 aa3.5□□□□□ -1.85
USP44-201ENST00000258499 GAGE7O76087 117 aa3.5□□□□□ -1.85
USP44-201ENST00000258499 RNASE1P07998 156 aaKnown RBP3.5□□□□□ -1.85
USP44-201ENST00000258499 GAGE12FP0CL80 117 aa3.5□□□□□ -1.85
USP44-201ENST00000258499 GAGE12GP0CL81 117 aa3.5□□□□□ -1.85
USP44-201ENST00000258499 GAGE12IP0CL82 117 aa3.5□□□□□ -1.85
USP44-201ENST00000258499 LINC00158P58513 81 aa3.5□□□□□ -1.85
USP44-201ENST00000258499 KRTAP1-3Q8IUG1 177 aa3.5□□□□□ -1.85
USP44-201ENST00000258499 C9orf85Q96MD7 179 aa3.5□□□□□ -1.85
USP44-201ENST00000258499 LINC00467Q9BRT7 94 aa3.5□□□□□ -1.85
USP44-201ENST00000258499 CDKN2A-AS1Q9UH64 79 aa3.5□□□□□ -1.85
USP44-201ENST00000258499 IGHV1-58A0A0C4DH39 117 aa3.49□□□□□ -1.85
USP44-201ENST00000258499 TRBV6-5A0A0K0K1A5 114 aa3.49□□□□□ -1.85
USP44-201ENST00000258499 SCGB1A1P11684 91 aa3.49□□□□□ -1.85
USP44-201ENST00000258499 NSUN5P1Q3KNT7 163 aa3.49□□□□□ -1.85
USP44-201ENST00000258499 C15orf53Q8NAA6 179 aa3.49□□□□□ -1.85
USP44-201ENST00000258499 Q96MF0 132 aa3.49□□□□□ -1.85
USP44-201ENST00000258499 Q9UF83 564 aa3.49□□□□□ -1.85
USP44-201ENST00000258499 ICOSQ9Y6W8 199 aa3.49□□□□□ -1.85
USP44-201ENST00000258499 KRTAP4-8A0A0G2JLE6 195 aa3.49□□□□□ -1.85
USP44-201ENST00000258499 TRIAP1O43715 76 aa3.49□□□□□ -1.85
USP44-201ENST00000258499 SMCPP49901 116 aaPredicted RBP3.49□□□□□ -1.85
USP44-201ENST00000258499 SPATA25Q9BR10 227 aa3.49□□□□□ -1.85
USP44-201ENST00000258499 FLNCQ14315 2725 aa3.49□□□□□ -1.85
USP44-201ENST00000258499 B5MCH6 92 aa3.49□□□□□ -1.85
USP44-201ENST00000258499 DEFB130BP0DP73 79 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms