RNA–Protein interactions for RNA: ENST00000243563.7

SNRPA-201, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-201ENST00000243563 HIST1H2BDP58876 126 aa13.78□□□□□ -0.2
SNRPA-201ENST00000243563 HIST1H2BCP62807 126 aa13.78□□□□□ -0.2
SNRPA-201ENST00000243563 HIST2H2BEQ16778 126 aa13.78□□□□□ -0.2
SNRPA-201ENST00000243563 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.78□□□□□ -0.2
SNRPA-201ENST00000243563 LELP1Q5T871 98 aa13.78□□□□□ -0.2
SNRPA-201ENST00000243563 HIST1H2BHQ93079 126 aa13.78□□□□□ -0.2
SNRPA-201ENST00000243563 HIST1H2BNQ99877 126 aa13.78□□□□□ -0.2
SNRPA-201ENST00000243563 HIST1H2BMQ99879 126 aa13.78□□□□□ -0.2
SNRPA-201ENST00000243563 CCL18P55774 89 aa13.77□□□□□ -0.21
SNRPA-201ENST00000243563 MRPS16Q9Y3D3 137 aaKnown RBP13.77□□□□□ -0.21
SNRPA-201ENST00000243563 LINC00310P59036 64 aa13.76□□□□□ -0.21
SNRPA-201ENST00000243563 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.75□□□□□ -0.21
SNRPA-201ENST00000243563 IGKV2-29A2NJV5 120 aaPredicted RBP13.75□□□□□ -0.21
SNRPA-201ENST00000243563 ESDP10768 282 aa13.75□□□□□ -0.21
SNRPA-201ENST00000243563 AMTP48728 403 aa13.75□□□□□ -0.21
SNRPA-201ENST00000243563 PRSS3P2Q8NHM4 247 aa13.75□□□□□ -0.21
SNRPA-201ENST00000243563 KIR2DL4Q99706 377 aa13.75□□□□□ -0.21
SNRPA-201ENST00000243563 IGHV1-24A0A0C4DH33 117 aa13.75□□□□□ -0.21
SNRPA-201ENST00000243563 FCER1GP30273 86 aa13.75□□□□□ -0.21
SNRPA-201ENST00000243563 NIT1Q86X76 327 aa13.75□□□□□ -0.21
SNRPA-201ENST00000243563 NXT2Q9NPJ8 142 aaKnown RBP13.75□□□□□ -0.21
SNRPA-201ENST00000243563 TRBV25-1A0A075B6N4 114 aa13.74□□□□□ -0.21
SNRPA-201ENST00000243563 LINC01546A6NGU7 62 aa13.74□□□□□ -0.21
SNRPA-201ENST00000243563 UBE2DNLQ8IWF7 75 aa13.74□□□□□ -0.21
SNRPA-201ENST00000243563 Q0VG73 95 aa13.73□□□□□ -0.21
SNRPA-201ENST00000243563 GAGE6Q13070 117 aa13.73□□□□□ -0.21
SNRPA-201ENST00000243563 C1orf196B1AJZ1 125 aa13.72□□□□□ -0.21
SNRPA-201ENST00000243563 NUPR1O60356 82 aa13.72□□□□□ -0.21
SNRPA-201ENST00000243563 RPL39P62891 51 aaKnown RBP13.72□□□□□ -0.21
SNRPA-201ENST00000243563 TMEM97Q5BJF2 176 aa13.72□□□□□ -0.21
SNRPA-201ENST00000243563 LINC00476Q8WZB0 136 aa13.72□□□□□ -0.21
SNRPA-201ENST00000243563 CHCHD5Q9BSY4 110 aa13.72□□□□□ -0.21
SNRPA-201ENST00000243563 UPK3BQ9BT76 320 aa13.72□□□□□ -0.21
SNRPA-201ENST00000243563 TMEM243Q9BU79 118 aa13.72□□□□□ -0.21
SNRPA-201ENST00000243563 RNASEKQ6P5S7 137 aaKnown RBP13.72□□□□□ -0.21
SNRPA-201ENST00000243563 LINC00614P0C842 121 aa13.71□□□□□ -0.22
SNRPA-201ENST00000243563 PMCHL1Q16048 86 aa13.71□□□□□ -0.22
SNRPA-201ENST00000243563 LGALS9CQ6DKI2 356 aa13.71□□□□□ -0.22
SNRPA-201ENST00000243563 FA2HQ7L5A8 372 aa13.71□□□□□ -0.22
SNRPA-201ENST00000243563 A0A096LNJ9 63 aa13.7□□□□□ -0.22
SNRPA-201ENST00000243563 SERF1AO75920 110 aa13.7□□□□□ -0.22
SNRPA-201ENST00000243563 LAGE3Q14657 143 aa13.7□□□□□ -0.22
SNRPA-201ENST00000243563 BAGE3Q86Y29 109 aa13.7□□□□□ -0.22
SNRPA-201ENST00000243563 C20orf203Q8NBC4 194 aa13.7□□□□□ -0.22
SNRPA-201ENST00000243563 TRAV8-6A0A0B4J262 113 aa13.69□□□□□ -0.22
SNRPA-201ENST00000243563 MPV17L2Q567V2 206 aa13.69□□□□□ -0.22
SNRPA-201ENST00000243563 HYDINQ4G0P3 5121 aa13.69□□□□□ -0.22
SNRPA-201ENST00000243563 LY6G6CO95867 125 aa13.68□□□□□ -0.22
SNRPA-201ENST00000243563 IGHV3-30P01768 117 aa13.68□□□□□ -0.22
SNRPA-201ENST00000243563 IGHV3-33P01772 117 aa13.68□□□□□ -0.22
SNRPA-201ENST00000243563 IGHV3-30-3P0DP02 117 aa13.68□□□□□ -0.22
SNRPA-201ENST00000243563 IGHV3-30-5P0DP03 117 aa13.68□□□□□ -0.22
SNRPA-201ENST00000243563 Q8N976 141 aa13.68□□□□□ -0.22
SNRPA-201ENST00000243563 SACSQ9NZJ4 4579 aa13.68□□□□□ -0.22
SNRPA-201ENST00000243563 KMT2AQ03164 3969 aa13.68□□□□□ -0.22
SNRPA-201ENST00000243563 Q9H8V8 135 aa13.68□□□□□ -0.22
SNRPA-201ENST00000243563 AP5S1Q9NUS5 200 aa13.68□□□□□ -0.22
SNRPA-201ENST00000243563 SIVA1O15304 175 aa13.67□□□□□ -0.22
SNRPA-201ENST00000243563 KRTAP1-5Q9BYS1 174 aa13.67□□□□□ -0.22
SNRPA-201ENST00000243563 IGLV4-60A0A075B6I1 120 aa13.66□□□□□ -0.22
SNRPA-201ENST00000243563 TMEM262E9PQX1 116 aa13.66□□□□□ -0.22
SNRPA-201ENST00000243563 DNAH10OSP0CZ25 163 aa13.66□□□□□ -0.22
SNRPA-201ENST00000243563 ORMDL2Q53FV1 153 aa13.66□□□□□ -0.22
SNRPA-201ENST00000243563 FAM104AQ969W3 186 aa13.66□□□□□ -0.22
SNRPA-201ENST00000243563 DNAH6Q9C0G6 4158 aa13.66□□□□□ -0.22
SNRPA-201ENST00000243563 K7EMI3 77 aa13.65□□□□□ -0.22
SNRPA-201ENST00000243563 FGF6P10767 208 aa13.65□□□□□ -0.22
SNRPA-201ENST00000243563 BTF3P20290 206 aaKnown RBP13.65□□□□□ -0.22
SNRPA-201ENST00000243563 RBX1P62877 108 aa13.65□□□□□ -0.22
SNRPA-201ENST00000243563 C2orf66Q6UXQ4 117 aa13.65□□□□□ -0.22
SNRPA-201ENST00000243563 UBE2D4Q9Y2X8 147 aa13.65□□□□□ -0.22
SNRPA-201ENST00000243563 UBE2L6O14933 153 aa13.64□□□□□ -0.23
SNRPA-201ENST00000243563 NDUFA6P56556 154 aa13.64□□□□□ -0.23
SNRPA-201ENST00000243563 FAM19A2Q8N3H0 131 aa13.64□□□□□ -0.23
SNRPA-201ENST00000243563 CHCHD1Q96BP2 118 aaKnown RBP13.64□□□□□ -0.23
SNRPA-201ENST00000243563 RAB5BP61020 215 aa13.64□□□□□ -0.23
SNRPA-201ENST00000243563 LINC01556Q5JQF7 62 aa13.64□□□□□ -0.23
SNRPA-201ENST00000243563 OPRPNQ99935 248 aaPredicted RBP13.64□□□□□ -0.23
SNRPA-201ENST00000243563 KMT2CQ8NEZ4 4911 aaKnown RBP13.62□□□□□ -0.23
SNRPA-201ENST00000243563 TOMM6Q96B49 74 aa13.62□□□□□ -0.23
SNRPA-201ENST00000243563 H7C423 109 aa13.61□□□□□ -0.23
SNRPA-201ENST00000243563 RNASE13Q5GAN3 156 aaKnown RBP13.61□□□□□ -0.23
SNRPA-201ENST00000243563 COA6Q5JTJ3 125 aaKnown RBP13.61□□□□□ -0.23
SNRPA-201ENST00000243563 MRPL52Q86TS9 123 aaKnown RBP13.61□□□□□ -0.23
SNRPA-201ENST00000243563 CYSLTR1Q9Y271 337 aa13.61□□□□□ -0.23
SNRPA-201ENST00000243563 A0A087WX48 190 aa13.61□□□□□ -0.23
SNRPA-201ENST00000243563 LCE6AA0A183 80 aa13.6□□□□□ -0.23
SNRPA-201ENST00000243563 HSBP1O75506 76 aa13.6□□□□□ -0.23
SNRPA-201ENST00000243563 AMMECR1LQ6DCA0 310 aa13.6□□□□□ -0.23
SNRPA-201ENST00000243563 Q6ZUT4 128 aa13.6□□□□□ -0.23
SNRPA-201ENST00000243563 A0A1B0GUV1 79 aa13.59□□□□□ -0.23
SNRPA-201ENST00000243563 IGIPA6NJ69 53 aa13.59□□□□□ -0.23
SNRPA-201ENST00000243563 HBDP02042 147 aa13.59□□□□□ -0.23
SNRPA-201ENST00000243563 CLPSL2Q6UWE3 100 aa13.59□□□□□ -0.23
SNRPA-201ENST00000243563 LINC00173Q6ZV60 143 aa13.59□□□□□ -0.23
SNRPA-201ENST00000243563 KLK12Q9UKR0 248 aa13.59□□□□□ -0.23
SNRPA-201ENST00000243563 M0R2N4 97 aa13.58□□□□□ -0.24
SNRPA-201ENST00000243563 PDZD11Q5EBL8 140 aa13.58□□□□□ -0.24
SNRPA-201ENST00000243563 ZC2HC1BQ5TFG8 222 aa13.58□□□□□ -0.24
SNRPA-201ENST00000243563 NBDYA0A0U1RRE5 68 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms