RNA–Protein interactions for RNA: ENST00000243108.4

HOXC6-201, Transcript of homeobox C6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC6, Length 1,733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-201ENST00000243108 RHODO00212 210 aa12.32□□□□□ -0.44
HOXC6-201ENST00000243108 LY6G6CO95867 125 aa12.32□□□□□ -0.44
HOXC6-201ENST00000243108 ODF1Q14990 250 aa12.32□□□□□ -0.44
HOXC6-201ENST00000243108 NEGR1Q7Z3B1 354 aa12.32□□□□□ -0.44
HOXC6-201ENST00000243108 TMEM263Q8WUH6 116 aaKnown RBP12.32□□□□□ -0.44
HOXC6-201ENST00000243108 RS1O15537 224 aa12.31□□□□□ -0.44
HOXC6-201ENST00000243108 MRPL16Q9NX20 251 aaKnown RBP12.31□□□□□ -0.44
HOXC6-201ENST00000243108 LINC01549A6NIU2 74 aa12.31□□□□□ -0.44
HOXC6-201ENST00000243108 G0S2P27469 103 aa12.31□□□□□ -0.44
HOXC6-201ENST00000243108 CTAG1AP78358 180 aa12.31□□□□□ -0.44
HOXC6-201ENST00000243108 C2orf66Q6UXQ4 117 aa12.31□□□□□ -0.44
HOXC6-201ENST00000243108 KIR2DL4Q99706 377 aa12.31□□□□□ -0.44
HOXC6-201ENST00000243108 KLK5Q9Y337 293 aaPredicted RBP12.31□□□□□ -0.44
HOXC6-201ENST00000243108 PRSS1P07477 247 aa12.3□□□□□ -0.44
HOXC6-201ENST00000243108 ZFP2Q6ZN57 461 aa12.3□□□□□ -0.44
HOXC6-201ENST00000243108 MRPL52Q86TS9 123 aaKnown RBP12.3□□□□□ -0.44
HOXC6-201ENST00000243108 DKK2Q9UBU2 259 aa12.3□□□□□ -0.44
HOXC6-201ENST00000243108 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.29□□□□□ -0.44
HOXC6-201ENST00000243108 MIFP14174 115 aa12.29□□□□□ -0.44
HOXC6-201ENST00000243108 DNAH10Q8IVF4 4471 aa12.29□□□□□ -0.44
HOXC6-201ENST00000243108 SCGB3A1Q96QR1 104 aa12.28□□□□□ -0.44
HOXC6-201ENST00000243108 IGHV3-73A0A0B4J1V6 119 aa12.28□□□□□ -0.44
HOXC6-201ENST00000243108 TRAV12-1A0A0B4J245 112 aa12.28□□□□□ -0.44
HOXC6-201ENST00000243108 DAZ2Q13117 558 aaKnown RBP12.28□□□□□ -0.44
HOXC6-201ENST00000243108 RHOHQ15669 191 aa12.28□□□□□ -0.44
HOXC6-201ENST00000243108 ERASQ7Z444 233 aa12.28□□□□□ -0.44
HOXC6-201ENST00000243108 C16orf74Q96GX8 76 aa12.28□□□□□ -0.44
HOXC6-201ENST00000243108 CELA1Q9UNI1 258 aa12.28□□□□□ -0.44
HOXC6-201ENST00000243108 CYSLTR1Q9Y271 337 aa12.28□□□□□ -0.44
HOXC6-201ENST00000243108 PLAC8L1A1L4L8 177 aa12.27□□□□□ -0.45
HOXC6-201ENST00000243108 IGHV3-53P01767 116 aa12.27□□□□□ -0.45
HOXC6-201ENST00000243108 Q6ZN92 141 aa12.27□□□□□ -0.45
HOXC6-201ENST00000243108 Q6ZSN1 163 aa12.27□□□□□ -0.45
HOXC6-201ENST00000243108 A0A087WX48 190 aa12.26□□□□□ -0.45
HOXC6-201ENST00000243108 I3L3M4 83 aa12.26□□□□□ -0.45
HOXC6-201ENST00000243108 TSHBP01222 138 aa12.26□□□□□ -0.45
HOXC6-201ENST00000243108 DNAH6Q9C0G6 4158 aa12.26□□□□□ -0.45
HOXC6-201ENST00000243108 TRGV1A0A0A0MS02 117 aa12.25□□□□□ -0.45
HOXC6-201ENST00000243108 P0DMU3 169 aa12.25□□□□□ -0.45
HOXC6-201ENST00000243108 FAM231AP0DMU4 169 aa12.25□□□□□ -0.45
HOXC6-201ENST00000243108 FAM231CP0DMU5 169 aa12.25□□□□□ -0.45
HOXC6-201ENST00000243108 HNRNPA3P51991 378 aaKnown RBP12.25□□□□□ -0.45
HOXC6-201ENST00000243108 LBHQ53QV2 105 aaPredicted RBP12.25□□□□□ -0.45
HOXC6-201ENST00000243108 ANKRD39Q53RE8 183 aa12.25□□□□□ -0.45
HOXC6-201ENST00000243108 Q6ZTC4 211 aa12.25□□□□□ -0.45
HOXC6-201ENST00000243108 NEXN-AS1Q8NBZ9 246 aa12.25□□□□□ -0.45
HOXC6-201ENST00000243108 SNHG12Q9BXW3 62 aa12.25□□□□□ -0.45
HOXC6-201ENST00000243108 IGIPA6NJ69 53 aa12.24□□□□□ -0.45
HOXC6-201ENST00000243108 DPM2O94777 84 aa12.24□□□□□ -0.45
HOXC6-201ENST00000243108 IGKCP01834 107 aa12.24□□□□□ -0.45
HOXC6-201ENST00000243108 BAALCQ8WXS3 180 aa12.24□□□□□ -0.45
HOXC6-201ENST00000243108 DNAJC30Q96LL9 226 aa12.24□□□□□ -0.45
HOXC6-201ENST00000243108 HHLA3Q9XRX5 114 aa12.24□□□□□ -0.45
HOXC6-201ENST00000243108 MRPS16Q9Y3D3 137 aaKnown RBP12.24□□□□□ -0.45
HOXC6-201ENST00000243108 M0R143 59 aa12.23□□□□□ -0.45
HOXC6-201ENST00000243108 EREGO14944 169 aa12.23□□□□□ -0.45
HOXC6-201ENST00000243108 RRN3P1Q2M238 152 aa12.23□□□□□ -0.45
HOXC6-201ENST00000243108 SLC25A34Q6PIV7 304 aa12.23□□□□□ -0.45
HOXC6-201ENST00000243108 Q6ZTI0 123 aa12.23□□□□□ -0.45
HOXC6-201ENST00000243108 TIMM17AQ99595 171 aa12.23□□□□□ -0.45
HOXC6-201ENST00000243108 MRPL35Q9NZE8 188 aaKnown RBP12.23□□□□□ -0.45
HOXC6-201ENST00000243108 TRAV4A0A0B4J268 109 aa12.23□□□□□ -0.45
HOXC6-201ENST00000243108 COX8AP10176 69 aa12.23□□□□□ -0.45
HOXC6-201ENST00000243108 C12orf74Q32Q52 190 aa12.23□□□□□ -0.45
HOXC6-201ENST00000243108 STPG4Q8N801 248 aa12.23□□□□□ -0.45
HOXC6-201ENST00000243108 OR4C5Q8NGB2 326 aa12.23□□□□□ -0.45
HOXC6-201ENST00000243108 TMEM141Q96I45 108 aa12.23□□□□□ -0.45
HOXC6-201ENST00000243108 NOP10Q9NPE3 64 aaKnown RBP12.23□□□□□ -0.45
HOXC6-201ENST00000243108 APLNQ9ULZ1 77 aa12.23□□□□□ -0.45
HOXC6-201ENST00000243108 TNFRSF18Q9Y5U5 241 aa12.23□□□□□ -0.45
HOXC6-201ENST00000243108 F8VRH5 84 aa12.22□□□□□ -0.45
HOXC6-201ENST00000243108 RPL39P62891 51 aaKnown RBP12.22□□□□□ -0.45
HOXC6-201ENST00000243108 C2orf88Q9BSF0 95 aa12.22□□□□□ -0.45
HOXC6-201ENST00000243108 Q9UF83 564 aa12.22□□□□□ -0.45
HOXC6-201ENST00000243108 IGLL5B9A064 214 aa12.21□□□□□ -0.45
HOXC6-201ENST00000243108 PLNP26678 52 aa12.21□□□□□ -0.45
HOXC6-201ENST00000243108 C20orf203Q8NBC4 194 aa12.21□□□□□ -0.45
HOXC6-201ENST00000243108 DEFB104AQ8WTQ1 72 aa12.21□□□□□ -0.45
HOXC6-201ENST00000243108 ZNF479Q96JC4 524 aa12.2□□□□□ -0.46
HOXC6-201ENST00000243108 FGF6P10767 208 aa12.2□□□□□ -0.46
HOXC6-201ENST00000243108 TP73-AS1Q9UF72 201 aa12.2□□□□□ -0.46
HOXC6-201ENST00000243108 CHTOPQ9Y3Y2 248 aaKnown RBP12.2□□□□□ -0.46
HOXC6-201ENST00000243108 TRAV10A0A0B4J240 114 aa12.18□□□□□ -0.46
HOXC6-201ENST00000243108 PRSS29PA6NIE9 313 aa12.18□□□□□ -0.46
HOXC6-201ENST00000243108 CIDEAO60543 219 aa12.18□□□□□ -0.46
HOXC6-201ENST00000243108 EMP1P54849 157 aa12.18□□□□□ -0.46
HOXC6-201ENST00000243108 TRBV10-1A0A0K0K1A3 114 aa12.17□□□□□ -0.46
HOXC6-201ENST00000243108 SMIM9A6NGZ8 99 aa12.17□□□□□ -0.46
HOXC6-201ENST00000243108 DLEU1O43261 78 aa12.17□□□□□ -0.46
HOXC6-201ENST00000243108 PMVKQ15126 192 aa12.17□□□□□ -0.46
HOXC6-201ENST00000243108 ZC2HC1BQ5TFG8 222 aa12.17□□□□□ -0.46
HOXC6-201ENST00000243108 BOD1L2Q8IYS8 172 aa12.17□□□□□ -0.46
HOXC6-201ENST00000243108 DNAH2Q9P225 4427 aa12.16□□□□□ -0.46
HOXC6-201ENST00000243108 K7EQD1 137 aa12.16□□□□□ -0.46
HOXC6-201ENST00000243108 TCTAP57738 103 aa12.16□□□□□ -0.46
HOXC6-201ENST00000243108 DEFB131BA0A096LNP1 70 aa12.15□□□□□ -0.46
HOXC6-201ENST00000243108 GAGE12BA1L429 117 aa12.15□□□□□ -0.46
HOXC6-201ENST00000243108 GAGE7O76087 117 aa12.15□□□□□ -0.46
HOXC6-201ENST00000243108 GAGE12FP0CL80 117 aa12.15□□□□□ -0.46
HOXC6-201ENST00000243108 GAGE12GP0CL81 117 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms