RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 AMN1Q8IY45 258 aa9.22□□□□□ -0.93
DDX39A-201ENST00000242776 Q8N814 137 aa9.22□□□□□ -0.93
DDX39A-201ENST00000242776 MRAP2Q96G30 205 aa9.22□□□□□ -0.93
DDX39A-201ENST00000242776 YPEL4Q96NS1 127 aa9.22□□□□□ -0.93
DDX39A-201ENST00000242776 GNB1LQ9BYB4 327 aa9.22□□□□□ -0.93
DDX39A-201ENST00000242776 SUMO4Q6EEV6 95 aa9.21□□□□□ -0.93
DDX39A-201ENST00000242776 TMEM136Q6ZRR5 245 aa9.21□□□□□ -0.93
DDX39A-201ENST00000242776 NTN5Q8WTR8 489 aaPredicted RBP9.21□□□□□ -0.93
DDX39A-201ENST00000242776 HMCN2Q8NDA2 5059 aa9.21□□□□□ -0.94
DDX39A-201ENST00000242776 TRBV10-1A0A0K0K1A3 114 aa9.21□□□□□ -0.94
DDX39A-201ENST00000242776 LOC100131303A0A0U1RQF7 123 aa9.21□□□□□ -0.94
DDX39A-201ENST00000242776 RAB4AP20338 218 aa9.21□□□□□ -0.94
DDX39A-201ENST00000242776 SERTAD4-AS1Q5TG53 156 aa9.21□□□□□ -0.94
DDX39A-201ENST00000242776 SLC25A29Q8N8R3 303 aa9.21□□□□□ -0.94
DDX39A-201ENST00000242776 DEFB104AQ8WTQ1 72 aa9.21□□□□□ -0.94
DDX39A-201ENST00000242776 LRP1Q07954 4544 aaKnown RBP9.2□□□□□ -0.94
DDX39A-201ENST00000242776 MRPL51Q4U2R6 128 aaKnown RBP9.2□□□□□ -0.94
DDX39A-201ENST00000242776 RNF185Q96GF1 192 aa9.2□□□□□ -0.94
DDX39A-201ENST00000242776 PLA2G2DQ9UNK4 145 aa9.2□□□□□ -0.94
DDX39A-201ENST00000242776 PPP1R17O96001 155 aa9.19□□□□□ -0.94
DDX39A-201ENST00000242776 APCSP02743 223 aa9.19□□□□□ -0.94
DDX39A-201ENST00000242776 PPBPP02775 128 aa9.19□□□□□ -0.94
DDX39A-201ENST00000242776 CKS2P33552 79 aa9.19□□□□□ -0.94
DDX39A-201ENST00000242776 RPL36AP83881 106 aaKnown RBP9.19□□□□□ -0.94
DDX39A-201ENST00000242776 C10orf126Q8N4M7 172 aa9.19□□□□□ -0.94
DDX39A-201ENST00000242776 RPL36ALQ969Q0 106 aaKnown RBP9.19□□□□□ -0.94
DDX39A-201ENST00000242776 TRAPPC1Q9Y5R8 145 aa9.19□□□□□ -0.94
DDX39A-201ENST00000242776 TRAV26-2A0A0B4J265 109 aa9.18□□□□□ -0.94
DDX39A-201ENST00000242776 M0QY20 66 aa9.18□□□□□ -0.94
DDX39A-201ENST00000242776 LECT2O14960 151 aa9.18□□□□□ -0.94
DDX39A-201ENST00000242776 IGHV3-30P01768 117 aa9.18□□□□□ -0.94
DDX39A-201ENST00000242776 IGHV3-33P01772 117 aa9.18□□□□□ -0.94
DDX39A-201ENST00000242776 IGHV3-30-3P0DP02 117 aa9.18□□□□□ -0.94
DDX39A-201ENST00000242776 IGHV3-30-5P0DP03 117 aa9.18□□□□□ -0.94
DDX39A-201ENST00000242776 LINC01620Q4KN68 170 aa9.18□□□□□ -0.94
DDX39A-201ENST00000242776 DNAJC30Q96LL9 226 aa9.18□□□□□ -0.94
DDX39A-201ENST00000242776 MRPL18Q9H0U6 180 aaKnown RBP9.18□□□□□ -0.94
DDX39A-201ENST00000242776 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.17□□□□□ -0.94
DDX39A-201ENST00000242776 IGHV3-38A0A0C4DH36 116 aa9.17□□□□□ -0.94
DDX39A-201ENST00000242776 COLCA2A8K830 154 aa9.17□□□□□ -0.94
DDX39A-201ENST00000242776 WFDC2Q14508 124 aa9.17□□□□□ -0.94
DDX39A-201ENST00000242776 OR10J3Q5JRS4 329 aa9.17□□□□□ -0.94
DDX39A-201ENST00000242776 ORMDL3Q8N138 153 aa9.17□□□□□ -0.94
DDX39A-201ENST00000242776 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.17□□□□□ -0.94
DDX39A-201ENST00000242776 NIT2Q9NQR4 276 aa9.17□□□□□ -0.94
DDX39A-201ENST00000242776 D6R8Y8 96 aa9.16□□□□□ -0.94
DDX39A-201ENST00000242776 K7EP13 123 aa9.16□□□□□ -0.94
DDX39A-201ENST00000242776 NCR2O95944 276 aa9.16□□□□□ -0.94
DDX39A-201ENST00000242776 RPS10P46783 165 aaKnown RBP9.16□□□□□ -0.94
DDX39A-201ENST00000242776 FABP9Q0Z7S8 132 aa9.16□□□□□ -0.94
DDX39A-201ENST00000242776 SH2D6Q7Z4S9 175 aa9.16□□□□□ -0.94
DDX39A-201ENST00000242776 NEXN-AS1Q8NBZ9 246 aa9.16□□□□□ -0.94
DDX39A-201ENST00000242776 LAMTOR2Q9Y2Q5 125 aa9.16□□□□□ -0.94
DDX39A-201ENST00000242776 TRBV7-3A0A075B6L6 115 aa9.15□□□□□ -0.94
DDX39A-201ENST00000242776 PHOX2AO14813 284 aa9.15□□□□□ -0.94
DDX39A-201ENST00000242776 RAB5AP20339 215 aa9.15□□□□□ -0.94
DDX39A-201ENST00000242776 PRELID3AQ96N28 172 aa9.15□□□□□ -0.94
DDX39A-201ENST00000242776 GAGE12JA6NER3 117 aa9.15□□□□□ -0.95
DDX39A-201ENST00000242776 IBA57-AS1B1ANH7 110 aa9.15□□□□□ -0.95
DDX39A-201ENST00000242776 SMKR1H3BMG3 65 aa9.15□□□□□ -0.95
DDX39A-201ENST00000242776 GAGE1Q13065 139 aa9.15□□□□□ -0.95
DDX39A-201ENST00000242776 GAGE4Q13068 117 aa9.15□□□□□ -0.95
DDX39A-201ENST00000242776 GAGE5Q13069 117 aa9.15□□□□□ -0.95
DDX39A-201ENST00000242776 GAGE13Q4V321 117 aa9.15□□□□□ -0.95
DDX39A-201ENST00000242776 RPL39LQ96EH5 51 aaKnown RBP9.14□□□□□ -0.95
DDX39A-201ENST00000242776 ST20Q9HBF5 79 aa9.14□□□□□ -0.95
DDX39A-201ENST00000242776 FAT3Q8TDW7 4589 aa9.13□□□□□ -0.95
DDX39A-201ENST00000242776 TRBV6-5A0A0K0K1A5 114 aa9.13□□□□□ -0.95
DDX39A-201ENST00000242776 TNFRSF6BO95407 300 aa9.13□□□□□ -0.95
DDX39A-201ENST00000242776 KIAA1644Q3SXP7 199 aa9.13□□□□□ -0.95
DDX39A-201ENST00000242776 LINC01556Q5JQF7 62 aa9.13□□□□□ -0.95
DDX39A-201ENST00000242776 SCXQ7RTU7 201 aa9.13□□□□□ -0.95
DDX39A-201ENST00000242776 DAZ4Q86SG3 579 aaKnown RBP9.13□□□□□ -0.95
DDX39A-201ENST00000242776 NRACQ8N912 160 aa9.13□□□□□ -0.95
DDX39A-201ENST00000242776 C20orf78Q9BR46 151 aa9.13□□□□□ -0.95
DDX39A-201ENST00000242776 DAZ3Q9NR90 486 aaKnown RBP9.13□□□□□ -0.95
DDX39A-201ENST00000242776 TRAV8-6A0A0B4J262 113 aa9.12□□□□□ -0.95
DDX39A-201ENST00000242776 LINC00694P0DN24 101 aa9.12□□□□□ -0.95
DDX39A-201ENST00000242776 UBE2D3P61077 147 aa9.12□□□□□ -0.95
DDX39A-201ENST00000242776 SUMO2P61956 95 aaKnown RBP9.12□□□□□ -0.95
DDX39A-201ENST00000242776 UBE2D2P62837 147 aa9.12□□□□□ -0.95
DDX39A-201ENST00000242776 Q6ZSA8 131 aa9.12□□□□□ -0.95
DDX39A-201ENST00000242776 Q8N3U1 123 aa9.12□□□□□ -0.95
DDX39A-201ENST00000242776 ATP6V0E2Q8NHE4 81 aa9.12□□□□□ -0.95
DDX39A-201ENST00000242776 MAP1LC3AQ9H492 121 aa9.12□□□□□ -0.95
DDX39A-201ENST00000242776 SDHAF1A6NFY7 115 aa9.11□□□□□ -0.95
DDX39A-201ENST00000242776 GAS8-AS1O95177 125 aa9.11□□□□□ -0.95
DDX39A-201ENST00000242776 NPYP01303 97 aa9.11□□□□□ -0.95
DDX39A-201ENST00000242776 TMEM97Q5BJF2 176 aa9.11□□□□□ -0.95
DDX39A-201ENST00000242776 TRGC2P03986 189 aa9.1□□□□□ -0.95
DDX39A-201ENST00000242776 RPL32P62910 135 aaKnown RBP9.1□□□□□ -0.95
DDX39A-201ENST00000242776 ALKBH7Q9BT30 221 aaPredicted RBP9.1□□□□□ -0.95
DDX39A-201ENST00000242776 Q9UF83 564 aa9.1□□□□□ -0.95
DDX39A-201ENST00000242776 PMCHP20382 165 aa9.09□□□□□ -0.95
DDX39A-201ENST00000242776 GTSF1LQ9H1H1 148 aa9.09□□□□□ -0.95
DDX39A-201ENST00000242776 I3L3M4 83 aa9.08□□□□□ -0.96
DDX39A-201ENST00000242776 VCYO14598 125 aa9.08□□□□□ -0.96
DDX39A-201ENST00000242776 TCAPO15273 167 aa9.08□□□□□ -0.96
DDX39A-201ENST00000242776 POLR2KP53803 58 aaKnown RBP9.08□□□□□ -0.96
DDX39A-201ENST00000242776 COTL1Q14019 142 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms