RNA–Protein interactions for RNA: ENST00000222728.3

HOXA6-201, Transcript of homeobox A6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA6, Length 989 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6-201ENST00000222728 KIAA1644Q3SXP7 199 aa13.41□□□□□ -0.26
HOXA6-201ENST00000222728 TMEM262E9PQX1 116 aa13.4□□□□□ -0.26
HOXA6-201ENST00000222728 TMEM243Q9BU79 118 aa13.4□□□□□ -0.26
HOXA6-201ENST00000222728 GNB1LQ9BYB4 327 aa13.4□□□□□ -0.26
HOXA6-201ENST00000222728 TRBV24-1A0A075B6N3 115 aa13.39□□□□□ -0.27
HOXA6-201ENST00000222728 TRAV9-2A0A087WT02 112 aa13.39□□□□□ -0.27
HOXA6-201ENST00000222728 TSHBP01222 138 aa13.39□□□□□ -0.27
HOXA6-201ENST00000222728 HLA-DQA1P01909 254 aa13.39□□□□□ -0.27
HOXA6-201ENST00000222728 APCSP02743 223 aa13.39□□□□□ -0.27
HOXA6-201ENST00000222728 YPEL4Q96NS1 127 aa13.39□□□□□ -0.27
HOXA6-201ENST00000222728 TRBV27A0A0K0K1C4 114 aa13.38□□□□□ -0.27
HOXA6-201ENST00000222728 MPV17L2Q567V2 206 aa13.38□□□□□ -0.27
HOXA6-201ENST00000222728 C1orf134Q5TEV5 83 aa13.38□□□□□ -0.27
HOXA6-201ENST00000222728 C20orf78Q9BR46 151 aa13.38□□□□□ -0.27
HOXA6-201ENST00000222728 SMCO4Q9NRQ5 59 aa13.38□□□□□ -0.27
HOXA6-201ENST00000222728 A0A087WX48 190 aa13.37□□□□□ -0.27
HOXA6-201ENST00000222728 VCYO14598 125 aa13.37□□□□□ -0.27
HOXA6-201ENST00000222728 COX19Q49B96 90 aa13.37□□□□□ -0.27
HOXA6-201ENST00000222728 MRPL18Q9H0U6 180 aaKnown RBP13.37□□□□□ -0.27
HOXA6-201ENST00000222728 PHOX2AO14813 284 aa13.36□□□□□ -0.27
HOXA6-201ENST00000222728 C6orf223Q8N319 242 aa13.36□□□□□ -0.27
HOXA6-201ENST00000222728 C10orf126Q8N4M7 172 aa13.36□□□□□ -0.27
HOXA6-201ENST00000222728 SMIM2Q9BVW6 85 aa13.36□□□□□ -0.27
HOXA6-201ENST00000222728 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.35□□□□□ -0.27
HOXA6-201ENST00000222728 LOC389332A0A1B0GUA5 103 aa13.35□□□□□ -0.27
HOXA6-201ENST00000222728 IGKV2-29A2NJV5 120 aaPredicted RBP13.35□□□□□ -0.27
HOXA6-201ENST00000222728 UBE2L6O14933 153 aa13.35□□□□□ -0.27
HOXA6-201ENST00000222728 Q8N976 141 aa13.35□□□□□ -0.27
HOXA6-201ENST00000222728 CHCHD7Q9BUK0 85 aa13.35□□□□□ -0.27
HOXA6-201ENST00000222728 RTL8CO15255 209 aa13.34□□□□□ -0.27
HOXA6-201ENST00000222728 MT-ND6P03923 174 aa13.34□□□□□ -0.27
HOXA6-201ENST00000222728 FCER1GP30273 86 aa13.34□□□□□ -0.27
HOXA6-201ENST00000222728 FABP9Q0Z7S8 132 aa13.34□□□□□ -0.27
HOXA6-201ENST00000222728 KIR2DL4Q99706 377 aa13.34□□□□□ -0.27
HOXA6-201ENST00000222728 Q9HAA7 133 aa13.34□□□□□ -0.27
HOXA6-201ENST00000222728 KLK12Q9UKR0 248 aa13.34□□□□□ -0.27
HOXA6-201ENST00000222728 LAMTOR2Q9Y2Q5 125 aa13.34□□□□□ -0.27
HOXA6-201ENST00000222728 DNAH17Q9UFH2 4485 aa13.33□□□□□ -0.27
HOXA6-201ENST00000222728 IBA57-AS1B1ANH7 110 aa13.33□□□□□ -0.28
HOXA6-201ENST00000222728 K7EP13 123 aa13.33□□□□□ -0.28
HOXA6-201ENST00000222728 RBX1P62877 108 aa13.33□□□□□ -0.28
HOXA6-201ENST00000222728 RPL32P62910 135 aaKnown RBP13.33□□□□□ -0.28
HOXA6-201ENST00000222728 MAP1LC3AQ9H492 121 aa13.33□□□□□ -0.28
HOXA6-201ENST00000222728 TRAPPC1Q9Y5R8 145 aa13.33□□□□□ -0.28
HOXA6-201ENST00000222728 TCAPO15273 167 aa13.32□□□□□ -0.28
HOXA6-201ENST00000222728 SCO1O75880 301 aa13.32□□□□□ -0.28
HOXA6-201ENST00000222728 ESDP10768 282 aa13.32□□□□□ -0.28
HOXA6-201ENST00000222728 ANGP03950 147 aaKnown RBP13.31□□□□□ -0.28
HOXA6-201ENST00000222728 PKIAP61925 76 aa13.31□□□□□ -0.28
HOXA6-201ENST00000222728 IGLV4-60A0A075B6I1 120 aa13.3□□□□□ -0.28
HOXA6-201ENST00000222728 PRSS47A8MTI9 375 aa13.29□□□□□ -0.28
HOXA6-201ENST00000222728 CLPSL2Q6UWE3 100 aa13.29□□□□□ -0.28
HOXA6-201ENST00000222728 UBE2WQ96B02 151 aa13.29□□□□□ -0.28
HOXA6-201ENST00000222728 ALKBH7Q9BT30 221 aaPredicted RBP13.29□□□□□ -0.28
HOXA6-201ENST00000222728 FAT2Q9NYQ8 4349 aa13.29□□□□□ -0.28
HOXA6-201ENST00000222728 FGF6P10767 208 aa13.28□□□□□ -0.28
HOXA6-201ENST00000222728 LAGE3Q14657 143 aa13.28□□□□□ -0.28
HOXA6-201ENST00000222728 AMMECR1LQ6DCA0 310 aa13.28□□□□□ -0.28
HOXA6-201ENST00000222728 RNASEKQ6P5S7 137 aaKnown RBP13.28□□□□□ -0.28
HOXA6-201ENST00000222728 Q6ZRN7 208 aaPredicted RBP13.28□□□□□ -0.28
HOXA6-201ENST00000222728 C20orf203Q8NBC4 194 aa13.28□□□□□ -0.28
HOXA6-201ENST00000222728 Q8N8P6 123 aa13.27□□□□□ -0.29
HOXA6-201ENST00000222728 A0A1B0GUV1 79 aa13.26□□□□□ -0.29
HOXA6-201ENST00000222728 H7C423 109 aa13.26□□□□□ -0.29
HOXA6-201ENST00000222728 ATP6V1G1O75348 118 aa13.26□□□□□ -0.29
HOXA6-201ENST00000222728 BTF3P20290 206 aaKnown RBP13.26□□□□□ -0.29
HOXA6-201ENST00000222728 RAB5AP20339 215 aa13.26□□□□□ -0.29
HOXA6-201ENST00000222728 IFI27P40305 119 aaPredicted RBP13.26□□□□□ -0.29
HOXA6-201ENST00000222728 ENHOQ6UWT2 76 aa13.26□□□□□ -0.29
HOXA6-201ENST00000222728 NFE4Q86UQ8 179 aa13.26□□□□□ -0.29
HOXA6-201ENST00000222728 LINC00269Q8N2A0 174 aa13.26□□□□□ -0.29
HOXA6-201ENST00000222728 PRSS29PA6NIE9 313 aa13.25□□□□□ -0.29
HOXA6-201ENST00000222728 CRPP02741 224 aa13.25□□□□□ -0.29
HOXA6-201ENST00000222728 TNP2Q05952 138 aa13.25□□□□□ -0.29
HOXA6-201ENST00000222728 TRAV8-3A0A0A6YYJ7 113 aa13.24□□□□□ -0.29
HOXA6-201ENST00000222728 RPL39P62891 51 aaKnown RBP13.24□□□□□ -0.29
HOXA6-201ENST00000222728 NXT2Q9NPJ8 142 aaKnown RBP13.24□□□□□ -0.29
HOXA6-201ENST00000222728 COLCA2A8K830 154 aa13.23□□□□□ -0.29
HOXA6-201ENST00000222728 LINC00336Q6ZUF6 198 aa13.23□□□□□ -0.29
HOXA6-201ENST00000222728 IGKV2D-24A0A075B6R9 120 aa13.22□□□□□ -0.29
HOXA6-201ENST00000222728 IGKV3OR2-268A0A0C4DH90 116 aa13.22□□□□□ -0.29
HOXA6-201ENST00000222728 REG3AQ06141 175 aa13.22□□□□□ -0.29
HOXA6-201ENST00000222728 PRSS3P2Q8NHM4 247 aa13.22□□□□□ -0.29
HOXA6-201ENST00000222728 TMEM101Q96IK0 257 aa13.22□□□□□ -0.29
HOXA6-201ENST00000222728 PRR34Q9NV39 138 aa13.22□□□□□ -0.29
HOXA6-201ENST00000222728 ZNF25P17030 456 aaPredicted RBP13.21□□□□□ -0.29
HOXA6-201ENST00000222728 Q0VG73 95 aa13.21□□□□□ -0.29
HOXA6-201ENST00000222728 MRPL52Q86TS9 123 aaKnown RBP13.21□□□□□ -0.29
HOXA6-201ENST00000222728 OR5A1Q8NGJ0 315 aa13.21□□□□□ -0.29
HOXA6-201ENST00000222728 UBE2D4Q9Y2X8 147 aa13.21□□□□□ -0.29
HOXA6-201ENST00000222728 PSCAO43653 123 aa13.2□□□□□ -0.3
HOXA6-201ENST00000222728 TMEM18Q96B42 140 aa13.2□□□□□ -0.3
HOXA6-201ENST00000222728 TRGC2P03986 189 aa13.19□□□□□ -0.3
HOXA6-201ENST00000222728 S100A1P23297 94 aa13.19□□□□□ -0.3
HOXA6-201ENST00000222728 DGAT2L7PQ6IED9 249 aa13.19□□□□□ -0.3
HOXA6-201ENST00000222728 C18orf32Q8TCD1 76 aa13.19□□□□□ -0.3
HOXA6-201ENST00000222728 IGLV10-54A0A075B6I4 117 aa13.18□□□□□ -0.3
HOXA6-201ENST00000222728 MIAQ16674 131 aa13.18□□□□□ -0.3
HOXA6-201ENST00000222728 ORMDL2Q53FV1 153 aa13.18□□□□□ -0.3
HOXA6-201ENST00000222728 RNASE13Q5GAN3 156 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms