RNA–Protein interactions for RNA: ENST00000219302.7

NME3-201, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NME3, Length 1,069 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-201ENST00000219302 CFAP161Q6P656 301 aa9.89□□□□□ -0.83
NME3-201ENST00000219302 C7orf33Q8WU49 177 aa9.89□□□□□ -0.83
NME3-201ENST00000219302 BATF3Q9NR55 127 aa9.89□□□□□ -0.83
NME3-201ENST00000219302 F2Z2F3 143 aa9.88□□□□□ -0.83
NME3-201ENST00000219302 NTF3P20783 257 aa9.88□□□□□ -0.83
NME3-201ENST00000219302 SULT1A2P50226 295 aa9.88□□□□□ -0.83
NME3-201ENST00000219302 WDR73Q6P4I2 378 aa9.88□□□□□ -0.83
NME3-201ENST00000219302 LYZL1Q6UWQ5 148 aa9.88□□□□□ -0.83
NME3-201ENST00000219302 DPH3P1Q9H4G8 78 aa9.88□□□□□ -0.83
NME3-201ENST00000219302 RAB19A4D1S5 217 aa9.87□□□□□ -0.83
NME3-201ENST00000219302 UBE2L6O14933 153 aa9.87□□□□□ -0.83
NME3-201ENST00000219302 NDUFS6O75380 124 aaKnown RBP9.87□□□□□ -0.83
NME3-201ENST00000219302 TRGC1P0CF51 173 aa9.87□□□□□ -0.83
NME3-201ENST00000219302 AMTP48728 403 aa9.87□□□□□ -0.83
NME3-201ENST00000219302 COTL1Q14019 142 aa9.87□□□□□ -0.83
NME3-201ENST00000219302 ODF1Q14990 250 aa9.87□□□□□ -0.83
NME3-201ENST00000219302 C9orf62Q8N4C0 152 aa9.87□□□□□ -0.83
NME3-201ENST00000219302 HMSDA8MTL9 139 aa9.86□□□□□ -0.83
NME3-201ENST00000219302 PRR3P79522 188 aaKnown RBP9.86□□□□□ -0.83
NME3-201ENST00000219302 MAJINQ3KP22 176 aa9.86□□□□□ -0.83
NME3-201ENST00000219302 HIGD2BQ4VC39 106 aa9.86□□□□□ -0.83
NME3-201ENST00000219302 GTSF1Q8WW33 167 aa9.86□□□□□ -0.83
NME3-201ENST00000219302 GNG13Q9P2W3 67 aa9.86□□□□□ -0.83
NME3-201ENST00000219302 TRAV1-1A0A0B4J248 108 aa9.85□□□□□ -0.83
NME3-201ENST00000219302 KRTAP10-8P60410 259 aa9.85□□□□□ -0.83
NME3-201ENST00000219302 SMIM12Q96EX1 92 aa9.85□□□□□ -0.83
NME3-201ENST00000219302 MANBALQ9NQG1 85 aa9.85□□□□□ -0.83
NME3-201ENST00000219302 TRBV20OR9-2A0A075B6H5 130 aa9.84□□□□□ -0.83
NME3-201ENST00000219302 GVQW2A0A096LPI5 108 aaPredicted RBP9.84□□□□□ -0.83
NME3-201ENST00000219302 IGKV2-24A0A0C4DH68 120 aa9.84□□□□□ -0.83
NME3-201ENST00000219302 IGKV3OR2-268A0A0C4DH90 116 aa9.84□□□□□ -0.83
NME3-201ENST00000219302 XKRY2A2RUG3 117 aa9.84□□□□□ -0.83
NME3-201ENST00000219302 BCL2L11O43521 198 aa9.84□□□□□ -0.83
NME3-201ENST00000219302 IFNA1P01562 189 aa9.84□□□□□ -0.83
NME3-201ENST00000219302 STPG4Q8N801 248 aa9.84□□□□□ -0.83
NME3-201ENST00000219302 GATD1Q8NB37 220 aa9.84□□□□□ -0.83
NME3-201ENST00000219302 CHCHD10Q8WYQ3 142 aaPredicted RBP9.84□□□□□ -0.83
NME3-201ENST00000219302 A0A0J9YXV3 536 aa9.83□□□□□ -0.84
NME3-201ENST00000219302 CTRLP40313 264 aa9.83□□□□□ -0.84
NME3-201ENST00000219302 GNG4P50150 75 aa9.83□□□□□ -0.84
NME3-201ENST00000219302 LYPD6BQ8NI32 183 aa9.83□□□□□ -0.84
NME3-201ENST00000219302 CNFNQ9BYD5 112 aa9.83□□□□□ -0.84
NME3-201ENST00000219302 A0A096LNI7 61 aa9.82□□□□□ -0.84
NME3-201ENST00000219302 KANTRA0A1W2PQU2 76 aa9.82□□□□□ -0.84
NME3-201ENST00000219302 Q6ZNX1 250 aa9.82□□□□□ -0.84
NME3-201ENST00000219302 NUDT10Q8NFP7 164 aa9.82□□□□□ -0.84
NME3-201ENST00000219302 NUDT11Q96G61 164 aa9.82□□□□□ -0.84
NME3-201ENST00000219302 TRAV26-2A0A0B4J265 109 aa9.81□□□□□ -0.84
NME3-201ENST00000219302 EIF5AP63241 154 aaKnown RBP9.81□□□□□ -0.84
NME3-201ENST00000219302 FOXI1Q12951 378 aa9.81□□□□□ -0.84
NME3-201ENST00000219302 SRSF9Q13242 221 aaKnown RBP eCLIP9.81□□□□□ -0.84
NME3-201ENST00000219302 RGS21Q2M5E4 152 aa9.81□□□□□ -0.84
NME3-201ENST00000219302 SPINK6Q6UWN8 80 aa9.81□□□□□ -0.84
NME3-201ENST00000219302 H7C423 109 aa9.8□□□□□ -0.84
NME3-201ENST00000219302 NCR2O95944 276 aa9.8□□□□□ -0.84
NME3-201ENST00000219302 TWIST1Q15672 202 aa9.8□□□□□ -0.84
NME3-201ENST00000219302 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.79□□□□□ -0.84
NME3-201ENST00000219302 IGKV2-29A2NJV5 120 aaPredicted RBP9.79□□□□□ -0.84
NME3-201ENST00000219302 PDE6DO43924 150 aa9.79□□□□□ -0.84
NME3-201ENST00000219302 FGF6P10767 208 aa9.79□□□□□ -0.84
NME3-201ENST00000219302 MEF2BQ02080 365 aaPredicted RBP9.79□□□□□ -0.84
NME3-201ENST00000219302 AMMECR1LQ6DCA0 310 aa9.79□□□□□ -0.84
NME3-201ENST00000219302 RPL39LQ96EH5 51 aaKnown RBP9.79□□□□□ -0.84
NME3-201ENST00000219302 BIN3Q9NQY0 253 aa9.79□□□□□ -0.84
NME3-201ENST00000219302 MED9Q9NWA0 146 aa9.79□□□□□ -0.84
NME3-201ENST00000219302 FOXA3P55318 350 aaPredicted RBP9.78□□□□□ -0.84
NME3-201ENST00000219302 RNASEKQ6P5S7 137 aaKnown RBP9.78□□□□□ -0.84
NME3-201ENST00000219302 LINC00474Q9P2X8 69 aa9.78□□□□□ -0.84
NME3-201ENST00000219302 FAM231BA6NCW3 169 aa9.77□□□□□ -0.85
NME3-201ENST00000219302 OR5A1Q8NGJ0 315 aa9.77□□□□□ -0.85
NME3-201ENST00000219302 LINC00959A0A1B0GUT2 108 aa9.76□□□□□ -0.85
NME3-201ENST00000219302 APCSP02743 223 aa9.76□□□□□ -0.85
NME3-201ENST00000219302 REG3GQ6UW15 175 aa9.76□□□□□ -0.85
NME3-201ENST00000219302 LINC00526Q96FQ7 95 aa9.76□□□□□ -0.85
NME3-201ENST00000219302 IGHV1-58A0A0C4DH39 117 aa9.75□□□□□ -0.85
NME3-201ENST00000219302 SDHAF1A6NFY7 115 aa9.75□□□□□ -0.85
NME3-201ENST00000219302 TEX46H3BTG2 121 aa9.75□□□□□ -0.85
NME3-201ENST00000219302 K7EN84 100 aa9.75□□□□□ -0.85
NME3-201ENST00000219302 ZNF25P17030 456 aaPredicted RBP9.75□□□□□ -0.85
NME3-201ENST00000219302 XCL1P47992 114 aa9.75□□□□□ -0.85
NME3-201ENST00000219302 OCC1Q8TAD7 63 aa9.75□□□□□ -0.85
NME3-201ENST00000219302 RNASE7Q9H1E1 156 aaKnown RBP9.75□□□□□ -0.85
NME3-201ENST00000219302 RPP21Q9H633 154 aaKnown RBP9.75□□□□□ -0.85
NME3-201ENST00000219302 CCL25O15444 150 aa9.74□□□□□ -0.85
NME3-201ENST00000219302 BCL2P10415 239 aa9.74□□□□□ -0.85
NME3-201ENST00000219302 ESDP10768 282 aa9.74□□□□□ -0.85
NME3-201ENST00000219302 TEX261Q6UWH6 196 aa9.74□□□□□ -0.85
NME3-201ENST00000219302 Q6ZRP5 223 aa9.74□□□□□ -0.85
NME3-201ENST00000219302 TRBV6-5A0A0K0K1A5 114 aa9.73□□□□□ -0.85
NME3-201ENST00000219302 CARD19Q96LW7 228 aa9.73□□□□□ -0.85
NME3-201ENST00000219302 I3L3M4 83 aa9.72□□□□□ -0.85
NME3-201ENST00000219302 GAS8-AS1O95177 125 aa9.72□□□□□ -0.85
NME3-201ENST00000219302 PMCHP20382 165 aa9.72□□□□□ -0.85
NME3-201ENST00000219302 EIF5AL1Q6IS14 154 aaKnown RBP9.72□□□□□ -0.85
NME3-201ENST00000219302 BTF3L4Q96K17 158 aa9.72□□□□□ -0.85
NME3-201ENST00000219302 PKIGQ9Y2B9 76 aa9.72□□□□□ -0.85
NME3-201ENST00000219302 TSHBP01222 138 aa9.71□□□□□ -0.86
NME3-201ENST00000219302 SYCNQ0VAF6 134 aa9.71□□□□□ -0.86
NME3-201ENST00000219302 SMIM15Q7Z3B0 74 aa9.71□□□□□ -0.86
NME3-201ENST00000219302 TMEM101Q96IK0 257 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms