RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 FAM30AQ9NZY2 134 aa11.25□□□□□ -0.61
SPTLC2-201ENST00000216484 FHL1Q13642 323 aa11.25□□□□□ -0.61
SPTLC2-201ENST00000216484 ODF1Q14990 250 aa11.25□□□□□ -0.61
SPTLC2-201ENST00000216484 J3QKU1 62 aa11.25□□□□□ -0.61
SPTLC2-201ENST00000216484 CRYGDP07320 174 aa11.25□□□□□ -0.61
SPTLC2-201ENST00000216484 MED14OSP0DP75 135 aa11.25□□□□□ -0.61
SPTLC2-201ENST00000216484 BLCAPP62952 87 aa11.25□□□□□ -0.61
SPTLC2-201ENST00000216484 C2orf70A6NJV1 201 aa11.24□□□□□ -0.61
SPTLC2-201ENST00000216484 CCKP06307 115 aa11.23□□□□□ -0.61
SPTLC2-201ENST00000216484 UFSP1Q6NVU6 142 aa11.23□□□□□ -0.61
SPTLC2-201ENST00000216484 MDFICQ9P1T7 246 aa11.23□□□□□ -0.61
SPTLC2-201ENST00000216484 WDR87Q6ZQQ6 2873 aa11.23□□□□□ -0.61
SPTLC2-201ENST00000216484 TRBV27A0A0K0K1C4 114 aa11.23□□□□□ -0.61
SPTLC2-201ENST00000216484 FAM19A3Q7Z5A8 133 aa11.23□□□□□ -0.61
SPTLC2-201ENST00000216484 COA6Q5JTJ3 125 aaKnown RBP11.23□□□□□ -0.61
SPTLC2-201ENST00000216484 FAM19A5Q7Z5A7 132 aaPredicted RBP11.23□□□□□ -0.61
SPTLC2-201ENST00000216484 C11orf45Q8TAV5 145 aa11.22□□□□□ -0.61
SPTLC2-201ENST00000216484 SMAD5-AS1Q9Y6J3 95 aa11.22□□□□□ -0.61
SPTLC2-201ENST00000216484 ATP5EP2Q5VTU8 51 aa11.22□□□□□ -0.61
SPTLC2-201ENST00000216484 C2CD3Q4AC94 2353 aa11.22□□□□□ -0.61
SPTLC2-201ENST00000216484 MYO9AB2RTY4 2548 aa11.22□□□□□ -0.61
SPTLC2-201ENST00000216484 CEMP1Q6PRD7 247 aaPredicted RBP11.22□□□□□ -0.61
SPTLC2-201ENST00000216484 C7orf33Q8WU49 177 aa11.22□□□□□ -0.61
SPTLC2-201ENST00000216484 RITA1Q96K30 269 aa11.22□□□□□ -0.61
SPTLC2-201ENST00000216484 NUPR1O60356 82 aa11.22□□□□□ -0.61
SPTLC2-201ENST00000216484 PRSS33Q8NF86 280 aa11.21□□□□□ -0.61
SPTLC2-201ENST00000216484 DCANP1Q8TF63 244 aa11.21□□□□□ -0.61
SPTLC2-201ENST00000216484 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.21□□□□□ -0.61
SPTLC2-201ENST00000216484 TRBV6-1A0A0K0K1D8 114 aa11.21□□□□□ -0.61
SPTLC2-201ENST00000216484 P0DMU3 169 aa11.21□□□□□ -0.62
SPTLC2-201ENST00000216484 FAM231AP0DMU4 169 aa11.21□□□□□ -0.62
SPTLC2-201ENST00000216484 FAM231CP0DMU5 169 aa11.21□□□□□ -0.62
SPTLC2-201ENST00000216484 WFDC13Q8IUB5 93 aa11.2□□□□□ -0.62
SPTLC2-201ENST00000216484 REG3AQ06141 175 aa11.2□□□□□ -0.62
SPTLC2-201ENST00000216484 HIVEP3Q5T1R4 2406 aa11.2□□□□□ -0.62
SPTLC2-201ENST00000216484 NDUFA7O95182 113 aa11.2□□□□□ -0.62
SPTLC2-201ENST00000216484 FAM222AQ5U5X8 452 aa11.19□□□□□ -0.62
SPTLC2-201ENST00000216484 ZFAND2AQ8N6M9 145 aa11.19□□□□□ -0.62
SPTLC2-201ENST00000216484 ACANP16112 2415 aa11.19□□□□□ -0.62
SPTLC2-201ENST00000216484 FOXL2NBQ6ZUU3 175 aa11.19□□□□□ -0.62
SPTLC2-201ENST00000216484 MUC6Q6W4X9 2439 aa11.19□□□□□ -0.62
SPTLC2-201ENST00000216484 SLX1AQ9BQ83 275 aa11.19□□□□□ -0.62
SPTLC2-201ENST00000216484 PRO0255Q9UI72 69 aa11.18□□□□□ -0.62
SPTLC2-201ENST00000216484 DEFB113Q30KQ7 82 aa11.18□□□□□ -0.62
SPTLC2-201ENST00000216484 IL17DQ8TAD2 202 aa11.18□□□□□ -0.62
SPTLC2-201ENST00000216484 IGHV7-81A0A0B4J1V7 117 aa11.18□□□□□ -0.62
SPTLC2-201ENST00000216484 IGLV9-49A0A0B4J1Y8 123 aa11.18□□□□□ -0.62
SPTLC2-201ENST00000216484 PLA2G2AP14555 144 aa11.18□□□□□ -0.62
SPTLC2-201ENST00000216484 IGKV2-28A0A075B6P5 120 aa11.18□□□□□ -0.62
SPTLC2-201ENST00000216484 IGKV2D-28P01615 120 aa11.18□□□□□ -0.62
SPTLC2-201ENST00000216484 C4orf3Q8WVX3 66 aa11.17□□□□□ -0.62
SPTLC2-201ENST00000216484 Q8NFD4 153 aa11.17□□□□□ -0.62
SPTLC2-201ENST00000216484 TMEM223A0PJW6 202 aa11.17□□□□□ -0.62
SPTLC2-201ENST00000216484 C5orf56Q8N8D9 126 aa11.17□□□□□ -0.62
SPTLC2-201ENST00000216484 SPATA12Q7Z6I5 190 aa11.17□□□□□ -0.62
SPTLC2-201ENST00000216484 LRRK2Q5S007 2527 aa11.17□□□□□ -0.62
SPTLC2-201ENST00000216484 POM121L12Q8N7R1 296 aa11.17□□□□□ -0.62
SPTLC2-201ENST00000216484 PPDPFQ9H3Y8 114 aa11.17□□□□□ -0.62
SPTLC2-201ENST00000216484 A0A0J9YXY3 114 aa11.16□□□□□ -0.62
SPTLC2-201ENST00000216484 XAGE1AQ9HD64 81 aa11.16□□□□□ -0.62
SPTLC2-201ENST00000216484 LTBP1Q14766 1721 aa11.16□□□□□ -0.62
SPTLC2-201ENST00000216484 LYRM9A8MSI8 78 aa11.16□□□□□ -0.62
SPTLC2-201ENST00000216484 K7EIM0 57 aa11.16□□□□□ -0.62
SPTLC2-201ENST00000216484 C22orf34Q6ZV56 151 aa11.16□□□□□ -0.62
SPTLC2-201ENST00000216484 I3L2K1 104 aa11.16□□□□□ -0.62
SPTLC2-201ENST00000216484 KAAG1Q9UBP8 84 aa11.15□□□□□ -0.62
SPTLC2-201ENST00000216484 ZNF503-AS2A6NEH8 195 aa11.15□□□□□ -0.62
SPTLC2-201ENST00000216484 DEFB1P60022 68 aa11.15□□□□□ -0.62
SPTLC2-201ENST00000216484 CTRLP40313 264 aa11.15□□□□□ -0.62
SPTLC2-201ENST00000216484 PRAC2D3DTV9 90 aa11.15□□□□□ -0.63
SPTLC2-201ENST00000216484 UBE2D2P62837 147 aa11.15□□□□□ -0.63
SPTLC2-201ENST00000216484 IGLV11-55A0A075B6I3 123 aa11.15□□□□□ -0.63
SPTLC2-201ENST00000216484 COL4A1P02462 1669 aa11.14□□□□□ -0.63
SPTLC2-201ENST00000216484 CHCHD10Q8WYQ3 142 aaPredicted RBP11.14□□□□□ -0.63
SPTLC2-201ENST00000216484 WFDC10AQ9H1F0 79 aa11.14□□□□□ -0.63
SPTLC2-201ENST00000216484 TRBV10-1A0A0K0K1A3 114 aa11.13□□□□□ -0.63
SPTLC2-201ENST00000216484 IGLV1-44P01699 117 aa11.13□□□□□ -0.63
SPTLC2-201ENST00000216484 COL4A6Q14031 1691 aa11.13□□□□□ -0.63
SPTLC2-201ENST00000216484 PLA2G1BP04054 148 aaKnown RBP11.12□□□□□ -0.63
SPTLC2-201ENST00000216484 LINC00467Q9BRT7 94 aa11.12□□□□□ -0.63
SPTLC2-201ENST00000216484 TRBV7-6A0A0J9YX20 115 aa11.12□□□□□ -0.63
SPTLC2-201ENST00000216484 ZFP36P26651 326 aaKnown RBP11.11□□□□□ -0.63
SPTLC2-201ENST00000216484 CRIPAKQ8N1N5 446 aa11.11□□□□□ -0.63
SPTLC2-201ENST00000216484 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.11□□□□□ -0.63
SPTLC2-201ENST00000216484 TRIAP1O43715 76 aa11.11□□□□□ -0.63
SPTLC2-201ENST00000216484 CTSZQ9UBR2 303 aa11.11□□□□□ -0.63
SPTLC2-201ENST00000216484 BDP1A6H8Y1 2624 aa11.11□□□□□ -0.63
SPTLC2-201ENST00000216484 CACNA1AO00555 2505 aa11.1□□□□□ -0.63
SPTLC2-201ENST00000216484 LINC00694P0DN24 101 aa11.1□□□□□ -0.63
SPTLC2-201ENST00000216484 PROK2Q9HC23 129 aa11.1□□□□□ -0.63
SPTLC2-201ENST00000216484 ZFYVE26Q68DK2 2539 aa11.1□□□□□ -0.63
SPTLC2-201ENST00000216484 LY6G6EA0A0G2JKS1 128 aa11.1□□□□□ -0.63
SPTLC2-201ENST00000216484 ZNF706Q9Y5V0 76 aaPredicted RBP11.1□□□□□ -0.63
SPTLC2-201ENST00000216484 TRBV6-5A0A0K0K1A5 114 aa11.09□□□□□ -0.63
SPTLC2-201ENST00000216484 COL4A5P29400 1685 aa11.09□□□□□ -0.63
SPTLC2-201ENST00000216484 F8P00451 2351 aa11.08□□□□□ -0.64
SPTLC2-201ENST00000216484 DEFB131BA0A096LNP1 70 aa11.08□□□□□ -0.64
SPTLC2-201ENST00000216484 LY6LH3BQJ8 138 aa11.08□□□□□ -0.64
SPTLC2-201ENST00000216484 NANOS2P60321 138 aaKnown RBP11.08□□□□□ -0.64
SPTLC2-201ENST00000216484 SOSTDC1Q6X4U4 206 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 134.5 ms