RNA–Protein interactions for RNA: ENST00000639041.1

CCDC7-212, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 5

Gene CCDC7, Length 482 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-212ENST00000639041 ABCA12Q86UK0 2595 aa0.39□□□□□ -2.35
CCDC7-212ENST00000639041 APOC4-APOC2K7ER74 178 aa0.38□□□□□ -2.35
CCDC7-212ENST00000639041 SPINK1P00995 79 aa0.38□□□□□ -2.35
CCDC7-212ENST00000639041 ARPC4P59998 168 aa0.38□□□□□ -2.35
CCDC7-212ENST00000639041 INSL4Q14641 139 aa0.38□□□□□ -2.35
CCDC7-212ENST00000639041 SCP2D1Q9UJQ7 156 aa0.38□□□□□ -2.35
CCDC7-212ENST00000639041 MYOM3Q5VTT5 1437 aa0.38□□□□□ -2.35
CCDC7-212ENST00000639041 MYO7AQ13402 2215 aa0.37□□□□□ -2.35
CCDC7-212ENST00000639041 BICRAQ9NZM4 1560 aa0.37□□□□□ -2.35
CCDC7-212ENST00000639041 SPEF2Q9C093 1822 aa0.37□□□□□ -2.35
CCDC7-212ENST00000639041 TRAV1-2A0A0B4J238 106 aa0.37□□□□□ -2.35
CCDC7-212ENST00000639041 DPH3Q96FX2 82 aa0.37□□□□□ -2.35
CCDC7-212ENST00000639041 PDCD10Q9BUL8 212 aa0.37□□□□□ -2.35
CCDC7-212ENST00000639041 GOLGA3Q08378 1498 aa0.36□□□□□ -2.35
CCDC7-212ENST00000639041 FAM92AA1XBS5 289 aa0.36□□□□□ -2.35
CCDC7-212ENST00000639041 HIST1H1DP16402 221 aaKnown RBP0.36□□□□□ -2.35
CCDC7-212ENST00000639041 CCDC167Q9P0B6 97 aa0.36□□□□□ -2.35
CCDC7-212ENST00000639041 TRBV10-3A0A0K0K1G6 114 aa0.35□□□□□ -2.35
CCDC7-212ENST00000639041 ZNF818PQ6ZRF7 136 aa0.35□□□□□ -2.35
CCDC7-212ENST00000639041 WFDC6Q9BQY6 131 aa0.35□□□□□ -2.35
CCDC7-212ENST00000639041 FAM107BQ9H098 131 aa0.35□□□□□ -2.35
CCDC7-212ENST00000639041 LINC00312Q9Y6C7 94 aa0.35□□□□□ -2.35
CCDC7-212ENST00000639041 ZFYVE26Q68DK2 2539 aa0.34□□□□□ -2.35
CCDC7-212ENST00000639041 FAM213BQ8TBF2 198 aa0.34□□□□□ -2.36
CCDC7-212ENST00000639041 PAIP2BQ9ULR5 123 aaKnown RBP0.34□□□□□ -2.36
CCDC7-212ENST00000639041 DOCK11Q5JSL3 2073 aa0.34□□□□□ -2.36
CCDC7-212ENST00000639041 AHNAKQ09666 5890 aaKnown RBP0.34□□□□□ -2.36
CCDC7-212ENST00000639041 ANK2Q01484 3957 aa0.33□□□□□ -2.36
CCDC7-212ENST00000639041 POLQO75417 2590 aa0.33□□□□□ -2.36
CCDC7-212ENST00000639041 CCDC58Q4VC31 144 aa0.33□□□□□ -2.36
CCDC7-212ENST00000639041 GRIN2AQ12879 1464 aa0.33□□□□□ -2.36
CCDC7-212ENST00000639041 CADP27708 2225 aa0.33□□□□□ -2.36
CCDC7-212ENST00000639041 MDN1Q9NU22 5596 aa0.32□□□□□ -2.36
CCDC7-212ENST00000639041 SIPA1L3O60292 1781 aaPredicted RBP0.32□□□□□ -2.36
CCDC7-212ENST00000639041 CASKIN1Q8WXD9 1431 aa0.31□□□□□ -2.36
CCDC7-212ENST00000639041 ZNF518AQ6AHZ1 1483 aa0.31□□□□□ -2.36
CCDC7-212ENST00000639041 G3V318 75 aa0.3□□□□□ -2.36
CCDC7-212ENST00000639041 CCL8P80075 99 aa0.3□□□□□ -2.36
CCDC7-212ENST00000639041 UBE2DNLQ8IWF7 75 aa0.3□□□□□ -2.36
CCDC7-212ENST00000639041 PTPRZ1P23471 2315 aaPredicted RBP0.3□□□□□ -2.36
CCDC7-212ENST00000639041 ZMYM4Q5VZL5 1548 aa0.29□□□□□ -2.36
CCDC7-212ENST00000639041 FAM25AB3EWG3 89 aa0.28□□□□□ -2.36
CCDC7-212ENST00000639041 FAM25CB3EWG5 89 aa0.28□□□□□ -2.36
CCDC7-212ENST00000639041 FAM25GB3EWG6 89 aa0.28□□□□□ -2.36
CCDC7-212ENST00000639041 GNG7O60262 68 aa0.28□□□□□ -2.36
CCDC7-212ENST00000639041 SMIM6P0DI80 62 aa0.28□□□□□ -2.36
CCDC7-212ENST00000639041 RBM3P98179 157 aaKnown RBP0.28□□□□□ -2.36
CCDC7-212ENST00000639041 SSBP3-AS1Q7Z2R9 100 aa0.28□□□□□ -2.36
CCDC7-212ENST00000639041 IGF2RP11717 2491 aa0.28□□□□□ -2.36
CCDC7-212ENST00000639041 NDUFA2O43678 99 aa0.27□□□□□ -2.37
CCDC7-212ENST00000639041 ARL11Q969Q4 196 aa0.27□□□□□ -2.37
CCDC7-212ENST00000639041 ZNF815PA8K554 130 aa0.26□□□□□ -2.37
CCDC7-212ENST00000639041 S100A12P80511 92 aa0.26□□□□□ -2.37
CCDC7-212ENST00000639041 IFT140Q96RY7 1462 aa0.26□□□□□ -2.37
CCDC7-212ENST00000639041 LRP1Q07954 4544 aaKnown RBP0.25□□□□□ -2.37
CCDC7-212ENST00000639041 BAGE3Q86Y29 109 aa0.25□□□□□ -2.37
CCDC7-212ENST00000639041 LINC00470Q9BZP3 86 aa0.25□□□□□ -2.37
CCDC7-212ENST00000639041 IFT172Q9UG01 1749 aa0.24□□□□□ -2.37
CCDC7-212ENST00000639041 NWD2Q9ULI1 1742 aa0.24□□□□□ -2.37
CCDC7-212ENST00000639041 HCG22E2RYF7 251 aa0.24□□□□□ -2.37
CCDC7-212ENST00000639041 AGPAT4-IT1Q9H0P7 198 aa0.24□□□□□ -2.37
CCDC7-212ENST00000639041 LRRC37A3O60309 1634 aa0.24□□□□□ -2.37
CCDC7-212ENST00000639041 MUC5ACP98088 5654 aa0.23□□□□□ -2.37
CCDC7-212ENST00000639041 LSM10Q969L4 123 aaKnown RBP0.23□□□□□ -2.37
CCDC7-212ENST00000639041 TSC22D3Q99576 134 aa0.23□□□□□ -2.37
CCDC7-212ENST00000639041 TRAV13-2A0A0B4J235 113 aa0.22□□□□□ -2.37
CCDC7-212ENST00000639041 SELENOWP63302 87 aa0.22□□□□□ -2.37
CCDC7-212ENST00000639041 CFAP126Q5VTH2 177 aa0.22□□□□□ -2.37
CCDC7-212ENST00000639041 COPS9Q8WXC6 57 aa0.22□□□□□ -2.37
CCDC7-212ENST00000639041 OTOGQ6ZRI0 2925 aa0.22□□□□□ -2.37
CCDC7-212ENST00000639041 F8P00451 2351 aa0.21□□□□□ -2.38
CCDC7-212ENST00000639041 SIX6O95475 246 aa0.21□□□□□ -2.38
CCDC7-212ENST00000639041 PPP1R17O96001 155 aa0.21□□□□□ -2.38
CCDC7-212ENST00000639041 NPVFQ9HCQ7 196 aa0.2□□□□□ -2.38
CCDC7-212ENST00000639041 PHLPP1O60346 1717 aa0.19□□□□□ -2.38
CCDC7-212ENST00000639041 CELSR2Q9HCU4 2923 aa0.19□□□□□ -2.38
CCDC7-212ENST00000639041 CFTRP13569 1480 aa0.19□□□□□ -2.38
CCDC7-212ENST00000639041 MEIG1Q5JSS6 88 aa0.19□□□□□ -2.38
CCDC7-212ENST00000639041 AQP10Q96PS8 301 aa0.19□□□□□ -2.38
CCDC7-212ENST00000639041 CCL18P55774 89 aa0.18□□□□□ -2.38
CCDC7-212ENST00000639041 C10orf128Q5T292 105 aa0.18□□□□□ -2.38
CCDC7-212ENST00000639041 Q8N8P6 123 aa0.18□□□□□ -2.38
CCDC7-212ENST00000639041 SERP1Q9Y6X1 66 aa0.18□□□□□ -2.38
CCDC7-212ENST00000639041 Q5VV11 94 aa0.17□□□□□ -2.38
CCDC7-212ENST00000639041 RERGLQ9H628 205 aa0.17□□□□□ -2.38
CCDC7-212ENST00000639041 NCOR2Q9Y618 2525 aa0.17□□□□□ -2.38
CCDC7-212ENST00000639041 ARAP2Q8WZ64 1704 aa0.16□□□□□ -2.38
CCDC7-212ENST00000639041 PIGBOS1A0A0B4J2F0 54 aa0.16□□□□□ -2.38
CCDC7-212ENST00000639041 HMGN1P05114 100 aa0.16□□□□□ -2.38
CCDC7-212ENST00000639041 SNRNP25Q9BV90 132 aaKnown RBP0.16□□□□□ -2.38
CCDC7-212ENST00000639041 KMT2DO14686 5537 aa0.15□□□□□ -2.39
CCDC7-212ENST00000639041 U3KQA8 63 aa0.15□□□□□ -2.39
CCDC7-212ENST00000639041 HRNRQ86YZ3 2850 aaPredicted RBP0.14□□□□□ -2.39
CCDC7-212ENST00000639041 PRDM2Q13029 1718 aa0.14□□□□□ -2.39
CCDC7-212ENST00000639041 SPAARA0A1B0GVQ0 90 aa0.14□□□□□ -2.39
CCDC7-212ENST00000639041 Q6AWC8 147 aa0.14□□□□□ -2.39
CCDC7-212ENST00000639041 TTC9CQ8N5M4 171 aa0.14□□□□□ -2.39
CCDC7-212ENST00000639041 SCN3BQ9NY72 215 aa0.14□□□□□ -2.39
CCDC7-212ENST00000639041 R4GMQ9 66 aa0.14□□□□□ -2.39
CCDC7-212ENST00000639041 PIN1P1O15428 100 aa0.13□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms