RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 LYZL1Q6UWQ5 148 aa1.88□□□□□ -2.11
PSPC1-208ENST00000635562 CYP2G1PQ6ZSU1 146 aa1.88□□□□□ -2.11
PSPC1-208ENST00000635562 ZNF826PQ6ZT77 177 aa1.88□□□□□ -2.11
PSPC1-208ENST00000635562 LINC00643Q86TS7 51 aa1.88□□□□□ -2.11
PSPC1-208ENST00000635562 ARL17AQ8IVW1 177 aa1.88□□□□□ -2.11
PSPC1-208ENST00000635562 SPANXA2-OT1Q8N9U9 137 aa1.88□□□□□ -2.11
PSPC1-208ENST00000635562 CYP4F30PQ9H0H9 118 aa1.88□□□□□ -2.11
PSPC1-208ENST00000635562 FAM215AQ9Y5M1 114 aa1.88□□□□□ -2.11
PSPC1-208ENST00000635562 KIF25-AS1Q9Y6Z4 181 aa1.88□□□□□ -2.11
PSPC1-208ENST00000635562 CABIN1Q9Y6J0 2220 aa1.88□□□□□ -2.11
PSPC1-208ENST00000635562 PARP4Q9UKK3 1724 aaKnown RBP1.88□□□□□ -2.11
PSPC1-208ENST00000635562 CICQ96RK0 1608 aaPredicted RBP1.88□□□□□ -2.11
PSPC1-208ENST00000635562 ALKQ9UM73 1620 aa1.88□□□□□ -2.11
PSPC1-208ENST00000635562 DOCK9Q9BZ29 2069 aa1.87□□□□□ -2.11
PSPC1-208ENST00000635562 ABCC6O95255 1503 aa1.87□□□□□ -2.11
PSPC1-208ENST00000635562 HMGXB3Q12766 1538 aa1.87□□□□□ -2.11
PSPC1-208ENST00000635562 ADAMTS7Q9UKP4 1686 aa1.87□□□□□ -2.11
PSPC1-208ENST00000635562 COL11A1P12107 1806 aaPredicted RBP1.87□□□□□ -2.11
PSPC1-208ENST00000635562 TRBV7-1A0A0A6YYK4 115 aa1.87□□□□□ -2.11
PSPC1-208ENST00000635562 C5orf67F2Z3F1 127 aa1.87□□□□□ -2.11
PSPC1-208ENST00000635562 H3BPC8 53 aa1.87□□□□□ -2.11
PSPC1-208ENST00000635562 CRPP02741 224 aa1.87□□□□□ -2.11
PSPC1-208ENST00000635562 KRTAP10-8P60410 259 aa1.87□□□□□ -2.11
PSPC1-208ENST00000635562 UBE2G1P62253 170 aa1.87□□□□□ -2.11
PSPC1-208ENST00000635562 NNATQ16517 81 aa1.87□□□□□ -2.11
PSPC1-208ENST00000635562 DEFB121Q5J5C9 76 aa1.87□□□□□ -2.11
PSPC1-208ENST00000635562 C9orf129Q5T035 196 aaKnown RBP1.87□□□□□ -2.11
PSPC1-208ENST00000635562 VMO1Q7Z5L0 202 aa1.87□□□□□ -2.11
PSPC1-208ENST00000635562 C14orf132Q9NPU4 83 aa1.87□□□□□ -2.11
PSPC1-208ENST00000635562 ZNF355PQ9NSJ1 428 aa1.87□□□□□ -2.11
PSPC1-208ENST00000635562 TP53TG3Q9ULZ0 132 aa1.87□□□□□ -2.11
PSPC1-208ENST00000635562 COL14A1Q05707 1796 aaKnown RBP1.87□□□□□ -2.11
PSPC1-208ENST00000635562 NESP48681 1621 aa1.87□□□□□ -2.11
PSPC1-208ENST00000635562 PAPPAQ13219 1627 aa1.87□□□□□ -2.11
PSPC1-208ENST00000635562 TJP1Q07157 1748 aa1.86□□□□□ -2.11
PSPC1-208ENST00000635562 ARHGEF5Q12774 1597 aa1.86□□□□□ -2.11
PSPC1-208ENST00000635562 ANKRD36A6QL64 1941 aa1.86□□□□□ -2.11
PSPC1-208ENST00000635562 TRBV10-3A0A0K0K1G6 114 aa1.86□□□□□ -2.11
PSPC1-208ENST00000635562 H3BQ85 93 aa1.86□□□□□ -2.11
PSPC1-208ENST00000635562 H7C2G1 150 aa1.86□□□□□ -2.11
PSPC1-208ENST00000635562 COX8AP10176 69 aa1.86□□□□□ -2.11
PSPC1-208ENST00000635562 DEFA4P12838 97 aa1.86□□□□□ -2.11
PSPC1-208ENST00000635562 DSCR4P56555 118 aaPredicted RBP1.86□□□□□ -2.11
PSPC1-208ENST00000635562 UBE2D3P61077 147 aa1.86□□□□□ -2.11
PSPC1-208ENST00000635562 UBE2D2P62837 147 aa1.86□□□□□ -2.11
PSPC1-208ENST00000635562 IGLV3-21P80748 117 aaPredicted RBP1.86□□□□□ -2.11
PSPC1-208ENST00000635562 C9orf116Q5BN46 136 aaPredicted RBP1.86□□□□□ -2.11
PSPC1-208ENST00000635562 LCE3EQ5T5B0 92 aa1.86□□□□□ -2.11
PSPC1-208ENST00000635562 CASC2Q6XLA1 102 aa1.86□□□□□ -2.11
PSPC1-208ENST00000635562 SMIM5Q71RC9 77 aa1.86□□□□□ -2.11
PSPC1-208ENST00000635562 FAM167A-AS1Q96KT0 104 aa1.86□□□□□ -2.11
PSPC1-208ENST00000635562 TIMM21Q9BVV7 248 aa1.86□□□□□ -2.11
PSPC1-208ENST00000635562 CDC42SE1Q9NRR8 79 aa1.86□□□□□ -2.11
PSPC1-208ENST00000635562 TIMM9Q9Y5J7 89 aa1.86□□□□□ -2.11
PSPC1-208ENST00000635562 ATP7BP35670 1465 aa1.86□□□□□ -2.11
PSPC1-208ENST00000635562 NHSQ6T4R5 1651 aa1.86□□□□□ -2.11
PSPC1-208ENST00000635562 GBF1Q92538 1859 aa1.86□□□□□ -2.11
PSPC1-208ENST00000635562 SLIT2O94813 1529 aa1.86□□□□□ -2.11
PSPC1-208ENST00000635562 NEXMIFQ5QGS0 1516 aa1.86□□□□□ -2.11
PSPC1-208ENST00000635562 MYOFQ9NZM1 2061 aa1.86□□□□□ -2.11
PSPC1-208ENST00000635562 PKD1L3Q7Z443 1732 aa1.86□□□□□ -2.11
PSPC1-208ENST00000635562 A8MU10 97 aa1.85□□□□□ -2.11
PSPC1-208ENST00000635562 HCG22E2RYF7 251 aa1.85□□□□□ -2.11
PSPC1-208ENST00000635562 E7EUB6 86 aa1.85□□□□□ -2.11
PSPC1-208ENST00000635562 SMIM11AP58511 58 aa1.85□□□□□ -2.11
PSPC1-208ENST00000635562 ZNF791Q3KP31 576 aaPredicted RBP1.85□□□□□ -2.11
PSPC1-208ENST00000635562 PSMG4Q5JS54 123 aa1.85□□□□□ -2.11
PSPC1-208ENST00000635562 RPL7L1Q6DKI1 246 aaKnown RBP1.85□□□□□ -2.11
PSPC1-208ENST00000635562 TVP23CQ96ET8 276 aa1.85□□□□□ -2.11
PSPC1-208ENST00000635562 C20orf166-AS1Q96NR2 134 aa1.85□□□□□ -2.11
PSPC1-208ENST00000635562 C3P01024 1663 aa1.85□□□□□ -2.11
PSPC1-208ENST00000635562 C5P01031 1676 aa1.85□□□□□ -2.11
PSPC1-208ENST00000635562 MPDZO75970 2070 aa1.85□□□□□ -2.11
PSPC1-208ENST00000635562 SHROOM3Q8TF72 1996 aa1.85□□□□□ -2.11
PSPC1-208ENST00000635562 CEP170BQ9Y4F5 1589 aaPredicted RBP1.85□□□□□ -2.11
PSPC1-208ENST00000635562 ZNF236Q9UL36 1845 aa1.84□□□□□ -2.11
PSPC1-208ENST00000635562 NUP214P35658 2090 aaPredicted RBP1.84□□□□□ -2.11
PSPC1-208ENST00000635562 RREB1Q92766 1687 aa1.84□□□□□ -2.11
PSPC1-208ENST00000635562 FMN2Q9NZ56 1722 aa1.84□□□□□ -2.11
PSPC1-208ENST00000635562 IGKV1D-42A0A075B6H8 117 aa1.84□□□□□ -2.11
PSPC1-208ENST00000635562 IGLV10-54A0A075B6I4 117 aa1.84□□□□□ -2.11
PSPC1-208ENST00000635562 TRBV7-3A0A075B6L6 115 aa1.84□□□□□ -2.11
PSPC1-208ENST00000635562 IGHV1-18A0A0C4DH31 117 aa1.84□□□□□ -2.11
PSPC1-208ENST00000635562 A0A0G2JND7 137 aa1.84□□□□□ -2.11
PSPC1-208ENST00000635562 A6NIN4 97 aa1.84□□□□□ -2.11
PSPC1-208ENST00000635562 SNRPGP15A8MWD9 76 aa1.84□□□□□ -2.11
PSPC1-208ENST00000635562 IGKV3-15P01624 115 aa1.84□□□□□ -2.11
PSPC1-208ENST00000635562 IGHV3-53P01767 116 aa1.84□□□□□ -2.11
PSPC1-208ENST00000635562 IL4P05112 153 aa1.84□□□□□ -2.11
PSPC1-208ENST00000635562 C3orf79P0CE67 100 aa1.84□□□□□ -2.11
PSPC1-208ENST00000635562 MGST1P10620 155 aaKnown RBP1.84□□□□□ -2.11
PSPC1-208ENST00000635562 EIF4EBP1Q13541 118 aaPredicted RBP1.84□□□□□ -2.11
PSPC1-208ENST00000635562 ZNF56Q15929 161 aa1.84□□□□□ -2.11
PSPC1-208ENST00000635562 Q5W150 140 aa1.84□□□□□ -2.11
PSPC1-208ENST00000635562 ZCCHC23Q6ZST2 131 aa1.84□□□□□ -2.11
PSPC1-208ENST00000635562 FAM223AQ8IWN6 122 aa1.84□□□□□ -2.11
PSPC1-208ENST00000635562 CYB561D1Q8N8Q1 229 aa1.84□□□□□ -2.11
PSPC1-208ENST00000635562 SPTSSBQ8NFR3 76 aa1.84□□□□□ -2.11
PSPC1-208ENST00000635562 RNF5Q99942 180 aa1.84□□□□□ -2.11
PSPC1-208ENST00000635562 PRO1854Q9UHT4 67 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms