RNA–Protein interactions for RNA: ENST00000631057.2

GPC3-204, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 1,581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-204ENST00000631057 IGLV4-69A0A075B6H9 119 aa5.97□□□□□ -1.45
GPC3-204ENST00000631057 TRAV2A0A0B4J234 112 aa5.97□□□□□ -1.45
GPC3-204ENST00000631057 A0A1B0GWB2 263 aa5.97□□□□□ -1.45
GPC3-204ENST00000631057 C11orf86A6NJI1 115 aa5.97□□□□□ -1.45
GPC3-204ENST00000631057 IGLL5B9A064 214 aa5.97□□□□□ -1.45
GPC3-204ENST00000631057 M0QY20 66 aa5.97□□□□□ -1.45
GPC3-204ENST00000631057 CRYGDP07320 174 aa5.97□□□□□ -1.45
GPC3-204ENST00000631057 RPL39P62891 51 aaKnown RBP5.97□□□□□ -1.45
GPC3-204ENST00000631057 NSUN5P1Q3KNT7 163 aa5.97□□□□□ -1.45
GPC3-204ENST00000631057 TCTEX1D4Q5JR98 221 aa5.97□□□□□ -1.45
GPC3-204ENST00000631057 AMTNQ6UX39 209 aa5.97□□□□□ -1.45
GPC3-204ENST00000631057 MAPK1IP1LQ8NDC0 245 aa5.97□□□□□ -1.45
GPC3-204ENST00000631057 ZNF479Q96JC4 524 aa5.97□□□□□ -1.45
GPC3-204ENST00000631057 ZNF256Q9Y2P7 627 aaPredicted RBP5.97□□□□□ -1.45
GPC3-204ENST00000631057 LRRK2Q5S007 2527 aa5.96□□□□□ -1.46
GPC3-204ENST00000631057 UTP20O75691 2785 aaKnown RBP5.96□□□□□ -1.46
GPC3-204ENST00000631057 A8MTW9 85 aa5.96□□□□□ -1.46
GPC3-204ENST00000631057 HOXA3O43365 443 aaPredicted RBP5.96□□□□□ -1.46
GPC3-204ENST00000631057 RRN3P1Q2M238 152 aa5.96□□□□□ -1.46
GPC3-204ENST00000631057 ZNF876PQ49A33 203 aa5.96□□□□□ -1.46
GPC3-204ENST00000631057 MORN3Q6PF18 240 aaPredicted RBP5.96□□□□□ -1.46
GPC3-204ENST00000631057 SCGB1D4Q6XE38 83 aa5.96□□□□□ -1.46
GPC3-204ENST00000631057 Q8N2B8 174 aa5.96□□□□□ -1.46
GPC3-204ENST00000631057 DUX5Q96PT3 197 aa5.96□□□□□ -1.46
GPC3-204ENST00000631057 PTPN13Q12923 2485 aa5.96□□□□□ -1.46
GPC3-204ENST00000631057 POLQO75417 2590 aa5.95□□□□□ -1.46
GPC3-204ENST00000631057 CD300EQ496F6 205 aaPredicted RBP5.95□□□□□ -1.46
GPC3-204ENST00000631057 LRRC75A-AS1Q8N1F1 130 aa5.95□□□□□ -1.46
GPC3-204ENST00000631057 EDA2RQ9HAV5 297 aa5.95□□□□□ -1.46
GPC3-204ENST00000631057 PEMTQ9UBM1 199 aa5.95□□□□□ -1.46
GPC3-204ENST00000631057 ZANQ9Y493 2812 aa5.95□□□□□ -1.46
GPC3-204ENST00000631057 I3L3M4 83 aa5.94□□□□□ -1.46
GPC3-204ENST00000631057 SAP30O75446 220 aa5.94□□□□□ -1.46
GPC3-204ENST00000631057 SLURP1P55000 103 aa5.94□□□□□ -1.46
GPC3-204ENST00000631057 SRSF9Q13242 221 aaKnown RBP eCLIP5.94□□□□□ -1.469e-7■■□□□ 13.2
GPC3-204ENST00000631057 DEFB113Q30KQ7 82 aa5.94□□□□□ -1.46
GPC3-204ENST00000631057 Q5PR19 223 aa5.94□□□□□ -1.46
GPC3-204ENST00000631057 NFE4Q86UQ8 179 aa5.94□□□□□ -1.46
GPC3-204ENST00000631057 MYO9AB2RTY4 2548 aa5.94□□□□□ -1.46
GPC3-204ENST00000631057 NAV2Q8IVL1 2488 aa5.93□□□□□ -1.46
GPC3-204ENST00000631057 KNCNA6PVL3 124 aa5.93□□□□□ -1.46
GPC3-204ENST00000631057 G3V4G9 280 aa5.93□□□□□ -1.46
GPC3-204ENST00000631057 GYPEP15421 78 aa5.93□□□□□ -1.46
GPC3-204ENST00000631057 DEFB131AP59861 70 aa5.93□□□□□ -1.46
GPC3-204ENST00000631057 PIK3CD-AS1Q5SR53 167 aa5.93□□□□□ -1.46
GPC3-204ENST00000631057 TMEM170BQ5T4T1 132 aa5.93□□□□□ -1.46
GPC3-204ENST00000631057 C20orf203Q8NBC4 194 aa5.93□□□□□ -1.46
GPC3-204ENST00000631057 C4orf3Q8WVX3 66 aa5.93□□□□□ -1.46
GPC3-204ENST00000631057 PLEKHB2Q96CS7 222 aa5.93□□□□□ -1.46
GPC3-204ENST00000631057 SPANXB1Q9NS25 103 aaPredicted RBP5.93□□□□□ -1.46
GPC3-204ENST00000631057 UBR5O95071 2799 aaPredicted RBP5.93□□□□□ -1.46
GPC3-204ENST00000631057 A8MWV9 139 aa5.93□□□□□ -1.46
GPC3-204ENST00000631057 F8W1H4 67 aa5.93□□□□□ -1.46
GPC3-204ENST00000631057 H3BMM0 161 aa5.93□□□□□ -1.46
GPC3-204ENST00000631057 M0R2P5 195 aa5.93□□□□□ -1.46
GPC3-204ENST00000631057 LGALS3P17931 250 aaKnown RBP5.93□□□□□ -1.46
GPC3-204ENST00000631057 EMP1P54849 157 aa5.93□□□□□ -1.46
GPC3-204ENST00000631057 ZNF415Q09FC8 603 aa5.93□□□□□ -1.46
GPC3-204ENST00000631057 DEFB136Q30KP8 78 aa5.93□□□□□ -1.46
GPC3-204ENST00000631057 DYNLRB2Q8TF09 96 aa5.93□□□□□ -1.46
GPC3-204ENST00000631057 DEFB104AQ8WTQ1 72 aa5.93□□□□□ -1.46
GPC3-204ENST00000631057 PTH2Q96A98 100 aa5.93□□□□□ -1.46
GPC3-204ENST00000631057 SPAG8Q99932 426 aaPredicted RBP5.93□□□□□ -1.46
GPC3-204ENST00000631057 CENPEQ02224 2701 aa5.92□□□□□ -1.46
GPC3-204ENST00000631057 A0A0J9YY99 117 aa5.92□□□□□ -1.46
GPC3-204ENST00000631057 J3QQQ9 107 aa5.92□□□□□ -1.46
GPC3-204ENST00000631057 RBMY1A1P0DJD3 496 aaKnown RBP5.92□□□□□ -1.46
GPC3-204ENST00000631057 RBMY1CP0DJD4 496 aa5.92□□□□□ -1.46
GPC3-204ENST00000631057 P0DMU3 169 aa5.92□□□□□ -1.46
GPC3-204ENST00000631057 FAM231AP0DMU4 169 aa5.92□□□□□ -1.46
GPC3-204ENST00000631057 FAM231CP0DMU5 169 aa5.92□□□□□ -1.46
GPC3-204ENST00000631057 UBE2D1P51668 147 aa5.92□□□□□ -1.46
GPC3-204ENST00000631057 RBMY1FQ15415 496 aaKnown RBP5.92□□□□□ -1.46
GPC3-204ENST00000631057 LCE2CQ5TA81 110 aa5.92□□□□□ -1.46
GPC3-204ENST00000631057 C18orf65Q6ZTR6 163 aa5.92□□□□□ -1.46
GPC3-204ENST00000631057 TMEM86BQ8N661 226 aa5.92□□□□□ -1.46
GPC3-204ENST00000631057 TEX29Q8N6K0 151 aa5.92□□□□□ -1.46
GPC3-204ENST00000631057 KLHL30-AS1Q8NEE0 82 aa5.92□□□□□ -1.46
GPC3-204ENST00000631057 ZNRF2Q8NHG8 242 aa5.92□□□□□ -1.46
GPC3-204ENST00000631057 DUX3Q96PT4 197 aa5.92□□□□□ -1.46
GPC3-204ENST00000631057 LINC00467Q9BRT7 94 aa5.92□□□□□ -1.46
GPC3-204ENST00000631057 MXRA5Q9NR99 2828 aa5.92□□□□□ -1.46
GPC3-204ENST00000631057 ABCA12Q86UK0 2595 aa5.91□□□□□ -1.46
GPC3-204ENST00000631057 WNK1Q9H4A3 2382 aa5.91□□□□□ -1.46
GPC3-204ENST00000631057 RBMY1BA6NDE4 496 aaKnown RBP5.91□□□□□ -1.46
GPC3-204ENST00000631057 RBMY1EA6NEQ0 496 aaKnown RBP5.91□□□□□ -1.46
GPC3-204ENST00000631057 RHODO00212 210 aa5.91□□□□□ -1.46
GPC3-204ENST00000631057 LEPROTO15243 131 aa5.91□□□□□ -1.46
GPC3-204ENST00000631057 RBMY1DP0C7P1 496 aaKnown RBP5.91□□□□□ -1.46
GPC3-204ENST00000631057 CRYBA4P53673 196 aa5.91□□□□□ -1.46
GPC3-204ENST00000631057 RPL24P83731 157 aaKnown RBP5.91□□□□□ -1.46
GPC3-204ENST00000631057 LYRM7Q5U5X0 104 aa5.91□□□□□ -1.46
GPC3-204ENST00000631057 TMEM61Q8N0U2 210 aa5.91□□□□□ -1.46
GPC3-204ENST00000631057 SLC25A29Q8N8R3 303 aa5.91□□□□□ -1.46
GPC3-204ENST00000631057 Q96MF0 132 aa5.91□□□□□ -1.46
GPC3-204ENST00000631057 VCX2Q9H322 139 aa5.91□□□□□ -1.46
GPC3-204ENST00000631057 MRPL16Q9NX20 251 aaKnown RBP5.91□□□□□ -1.46
GPC3-204ENST00000631057 PYGO1Q9Y3Y4 419 aa5.91□□□□□ -1.46
GPC3-204ENST00000631057 BAHCC1Q9P281 2608 aa5.91□□□□□ -1.46
GPC3-204ENST00000631057 TEX15Q9BXT5 2789 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms