RNA–Protein interactions for RNA: ENST00000629667.2

PDLIM3-213, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 1,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-213ENST00000629667 ZNF726P1Q15940 193 aa9.94□□□□□ -0.82
PDLIM3-213ENST00000629667 NTM-AS1Q6ZSK4 140 aa9.94□□□□□ -0.82
PDLIM3-213ENST00000629667 RNF185Q96GF1 192 aa9.94□□□□□ -0.82
PDLIM3-213ENST00000629667 DERL1Q9BUN8 251 aa9.94□□□□□ -0.82
PDLIM3-213ENST00000629667 AP5S1Q9NUS5 200 aa9.94□□□□□ -0.82
PDLIM3-213ENST00000629667 TRBV25-1A0A075B6N4 114 aa9.93□□□□□ -0.82
PDLIM3-213ENST00000629667 CHTF8P0CG12 524 aa9.93□□□□□ -0.82
PDLIM3-213ENST00000629667 REG3AQ06141 175 aa9.93□□□□□ -0.82
PDLIM3-213ENST00000629667 OR10AG1Q8NH19 301 aa9.93□□□□□ -0.82
PDLIM3-213ENST00000629667 ZNF471Q9BX82 626 aaPredicted RBP9.93□□□□□ -0.82
PDLIM3-213ENST00000629667 TRBV6-1A0A0K0K1D8 114 aa9.92□□□□□ -0.82
PDLIM3-213ENST00000629667 LTAP01374 205 aa9.92□□□□□ -0.82
PDLIM3-213ENST00000629667 DEFA1P59665 94 aa9.92□□□□□ -0.82
PDLIM3-213ENST00000629667 DEFA3P59666 94 aa9.92□□□□□ -0.82
PDLIM3-213ENST00000629667 VAX2Q9UIW0 290 aa9.92□□□□□ -0.82
PDLIM3-213ENST00000629667 PHOX2AO14813 284 aa9.91□□□□□ -0.82
PDLIM3-213ENST00000629667 SPANXN1Q5VSR9 72 aa9.91□□□□□ -0.82
PDLIM3-213ENST00000629667 SPACA4Q8TDM5 124 aa9.91□□□□□ -0.82
PDLIM3-213ENST00000629667 C7orf33Q8WU49 177 aa9.91□□□□□ -0.82
PDLIM3-213ENST00000629667 BORCS7-ASMTA0A0B4J1R7 106 aa9.9□□□□□ -0.82
PDLIM3-213ENST00000629667 TRAV8-4A0A0B4J246 113 aa9.9□□□□□ -0.82
PDLIM3-213ENST00000629667 P01737 135 aa9.9□□□□□ -0.82
PDLIM3-213ENST00000629667 RPL7L1Q6DKI1 246 aaKnown RBP9.9□□□□□ -0.82
PDLIM3-213ENST00000629667 IGHV1-24A0A0C4DH33 117 aa9.89□□□□□ -0.83
PDLIM3-213ENST00000629667 MUC21A0A0G2JKD1 596 aa9.89□□□□□ -0.83
PDLIM3-213ENST00000629667 MUC21A0A140T8X8 626 aa9.89□□□□□ -0.83
PDLIM3-213ENST00000629667 SMIM17P0DL12 118 aa9.89□□□□□ -0.83
PDLIM3-213ENST00000629667 AKR1C3P42330 323 aa9.89□□□□□ -0.83
PDLIM3-213ENST00000629667 SSTP61278 116 aa9.89□□□□□ -0.83
PDLIM3-213ENST00000629667 IQCJQ1A5X6 159 aa9.89□□□□□ -0.83
PDLIM3-213ENST00000629667 AKR1C8PQ5T2L2 129 aa9.89□□□□□ -0.83
PDLIM3-213ENST00000629667 CST9LP1Q5W188 147 aa9.89□□□□□ -0.83
PDLIM3-213ENST00000629667 LINC01600Q96MT4 127 aa9.89□□□□□ -0.83
PDLIM3-213ENST00000629667 TCEAL7Q9BRU2 100 aa9.89□□□□□ -0.83
PDLIM3-213ENST00000629667 SLPIP03973 132 aa9.88□□□□□ -0.83
PDLIM3-213ENST00000629667 CXCL1P09341 107 aa9.88□□□□□ -0.83
PDLIM3-213ENST00000629667 RAB5CP51148 216 aa9.88□□□□□ -0.83
PDLIM3-213ENST00000629667 INO80EQ8NBZ0 244 aaPredicted RBP9.88□□□□□ -0.83
PDLIM3-213ENST00000629667 STOML3Q8TAV4 291 aa9.88□□□□□ -0.83
PDLIM3-213ENST00000629667 PLAC8Q9NZF1 115 aa9.88□□□□□ -0.83
PDLIM3-213ENST00000629667 MAP1LC3B2A6NCE7 125 aa9.87□□□□□ -0.83
PDLIM3-213ENST00000629667 SNAI2O43623 268 aa9.87□□□□□ -0.83
PDLIM3-213ENST00000629667 OR5AL1P0C617 328 aa9.87□□□□□ -0.83
PDLIM3-213ENST00000629667 GZMBP10144 247 aa9.87□□□□□ -0.83
PDLIM3-213ENST00000629667 FHITP49789 147 aa9.87□□□□□ -0.83
PDLIM3-213ENST00000629667 C20orf203Q8NBC4 194 aa9.87□□□□□ -0.83
PDLIM3-213ENST00000629667 SSBP4Q9BWG4 385 aaPredicted RBP9.87□□□□□ -0.83
PDLIM3-213ENST00000629667 MAP1LC3BQ9GZQ8 125 aa9.87□□□□□ -0.83
PDLIM3-213ENST00000629667 ALG5Q9Y673 324 aa9.87□□□□□ -0.83
PDLIM3-213ENST00000629667 KIF25-AS1Q9Y6Z4 181 aa9.87□□□□□ -0.83
PDLIM3-213ENST00000629667 GTSF1Q8WW33 167 aa9.86□□□□□ -0.83
PDLIM3-213ENST00000629667 AP1S3Q96PC3 154 aa9.86□□□□□ -0.83
PDLIM3-213ENST00000629667 COX6A2Q02221 97 aa9.85□□□□□ -0.83
PDLIM3-213ENST00000629667 ODF1Q14990 250 aa9.85□□□□□ -0.83
PDLIM3-213ENST00000629667 Q5BKY6 102 aa9.85□□□□□ -0.83
PDLIM3-213ENST00000629667 IGLV4-60A0A075B6I1 120 aa9.84□□□□□ -0.83
PDLIM3-213ENST00000629667 A0A1B0GUV1 79 aa9.84□□□□□ -0.83
PDLIM3-213ENST00000629667 S100A9P06702 114 aaKnown RBP9.84□□□□□ -0.83
PDLIM3-213ENST00000629667 WDR73Q6P4I2 378 aa9.84□□□□□ -0.83
PDLIM3-213ENST00000629667 TMEM243Q9BU79 118 aa9.84□□□□□ -0.83
PDLIM3-213ENST00000629667 MED28Q9H204 178 aa9.84□□□□□ -0.83
PDLIM3-213ENST00000629667 H7C1H1 209 aa9.83□□□□□ -0.84
PDLIM3-213ENST00000629667 MGPP08493 103 aa9.83□□□□□ -0.84
PDLIM3-213ENST00000629667 PRR3P79522 188 aaKnown RBP9.83□□□□□ -0.84
PDLIM3-213ENST00000629667 MAJINQ3KP22 176 aa9.83□□□□□ -0.84
PDLIM3-213ENST00000629667 GFRA4Q9GZZ7 299 aa9.83□□□□□ -0.84
PDLIM3-213ENST00000629667 FXYD6-FXYD2A0A087WZ82 144 aa9.82□□□□□ -0.84
PDLIM3-213ENST00000629667 IGKV2-24A0A0C4DH68 120 aa9.82□□□□□ -0.84
PDLIM3-213ENST00000629667 A0A0J9YXV3 536 aa9.82□□□□□ -0.84
PDLIM3-213ENST00000629667 M0QY20 66 aa9.82□□□□□ -0.84
PDLIM3-213ENST00000629667 PAGE4O60829 102 aa9.82□□□□□ -0.84
PDLIM3-213ENST00000629667 NDUFS6O75380 124 aaKnown RBP9.82□□□□□ -0.84
PDLIM3-213ENST00000629667 RPS10P46783 165 aaKnown RBP9.82□□□□□ -0.84
PDLIM3-213ENST00000629667 SULT1A2P50226 295 aa9.82□□□□□ -0.84
PDLIM3-213ENST00000629667 CFAP161Q6P656 301 aa9.82□□□□□ -0.84
PDLIM3-213ENST00000629667 BAGE2Q86Y30 109 aa9.82□□□□□ -0.84
PDLIM3-213ENST00000629667 MLST8Q9BVC4 326 aa9.82□□□□□ -0.84
PDLIM3-213ENST00000629667 UBE2L6O14933 153 aa9.81□□□□□ -0.84
PDLIM3-213ENST00000629667 NKX2-5P52952 324 aaPredicted RBP9.81□□□□□ -0.84
PDLIM3-213ENST00000629667 STPG4Q8N801 248 aa9.81□□□□□ -0.84
PDLIM3-213ENST00000629667 PRSS3P2Q8NHM4 247 aa9.81□□□□□ -0.84
PDLIM3-213ENST00000629667 LYPD6BQ8NI32 183 aa9.81□□□□□ -0.84
PDLIM3-213ENST00000629667 SCO2A0A1W2PP80 73 aa9.8□□□□□ -0.84
PDLIM3-213ENST00000629667 GIPP09681 153 aaPredicted RBP9.8□□□□□ -0.84
PDLIM3-213ENST00000629667 SUMO4Q6EEV6 95 aa9.8□□□□□ -0.84
PDLIM3-213ENST00000629667 REG3GQ6UW15 175 aa9.8□□□□□ -0.84
PDLIM3-213ENST00000629667 C15orf56Q8N910 161 aa9.8□□□□□ -0.84
PDLIM3-213ENST00000629667 GAGE12HA6NDE8 117 aa9.79□□□□□ -0.84
PDLIM3-213ENST00000629667 HIGD2BQ4VC39 106 aa9.79□□□□□ -0.84
PDLIM3-213ENST00000629667 TPPP3Q9BW30 176 aa9.79□□□□□ -0.84
PDLIM3-213ENST00000629667 BATF3Q9NR55 127 aa9.79□□□□□ -0.84
PDLIM3-213ENST00000629667 IGKV3OR2-268A0A0C4DH90 116 aa9.78□□□□□ -0.84
PDLIM3-213ENST00000629667 PFDN1O60925 122 aa9.78□□□□□ -0.84
PDLIM3-213ENST00000629667 KRTAP10-8P60410 259 aa9.78□□□□□ -0.84
PDLIM3-213ENST00000629667 RASL11AQ6T310 242 aa9.78□□□□□ -0.84
PDLIM3-213ENST00000629667 SPINK6Q6UWN8 80 aa9.78□□□□□ -0.84
PDLIM3-213ENST00000629667 PGLYRP4Q96LB8 373 aa9.78□□□□□ -0.84
PDLIM3-213ENST00000629667 GAS8-AS1O95177 125 aa9.76□□□□□ -0.85
PDLIM3-213ENST00000629667 AMTP48728 403 aa9.76□□□□□ -0.85
PDLIM3-213ENST00000629667 COTL1Q14019 142 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms