RNA–Protein interactions for RNA: ENST00000628124.2

GABRB3-216, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2 BASIC

Gene GABRB3, Length 5,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-216ENST00000628124 DOCK3Q8IZD9 2030 aa6.8□□□□□ -1.32
GABRB3-216ENST00000628124 SPATA12Q7Z6I5 190 aa6.79□□□□□ -1.32
GABRB3-216ENST00000628124 C11orf53Q8IXP5 236 aa6.79□□□□□ -1.32
GABRB3-216ENST00000628124 LOC285556D6RIA3 1793 aa6.79□□□□□ -1.32
GABRB3-216ENST00000628124 COL24A1Q17RW2 1714 aa6.79□□□□□ -1.32
GABRB3-216ENST00000628124 SIRPDQ9H106 197 aa6.79□□□□□ -1.32
GABRB3-216ENST00000628124 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.79□□□□□ -1.32
GABRB3-216ENST00000628124 RBBP6Q7Z6E9 1792 aaKnown RBP6.79□□□□□ -1.32
GABRB3-216ENST00000628124 ADAMTSL1Q8N6G6 1762 aa6.79□□□□□ -1.32
GABRB3-216ENST00000628124 RSPO1Q2MKA7 263 aaPredicted RBP6.79□□□□□ -1.32
GABRB3-216ENST00000628124 C1orf158Q8N1D5 194 aa6.79□□□□□ -1.32
GABRB3-216ENST00000628124 TTTY13Q9BZ97 58 aa6.79□□□□□ -1.32
GABRB3-216ENST00000628124 IMUPQ9GZP8 106 aa6.79□□□□□ -1.32
GABRB3-216ENST00000628124 FAM222AQ5U5X8 452 aa6.79□□□□□ -1.32
GABRB3-216ENST00000628124 FAM19A5Q7Z5A7 132 aaPredicted RBP6.79□□□□□ -1.32
GABRB3-216ENST00000628124 FAM167A-AS1Q96KT0 104 aa6.79□□□□□ -1.32
GABRB3-216ENST00000628124 ZNF407Q9C0G0 2248 aa6.78□□□□□ -1.32
GABRB3-216ENST00000628124 LY6G6EA0A0G2JKS1 128 aa6.78□□□□□ -1.32
GABRB3-216ENST00000628124 MIFP14174 115 aa6.78□□□□□ -1.32
GABRB3-216ENST00000628124 UBE2D2P62837 147 aa6.78□□□□□ -1.32
GABRB3-216ENST00000628124 PIK3CD-AS1Q5SR53 167 aa6.78□□□□□ -1.32
GABRB3-216ENST00000628124 SPINK6Q6UWN8 80 aa6.78□□□□□ -1.32
GABRB3-216ENST00000628124 SCXQ7RTU7 201 aa6.78□□□□□ -1.32
GABRB3-216ENST00000628124 HEATR5AQ86XA9 2040 aa6.78□□□□□ -1.32
GABRB3-216ENST00000628124 PDCD11Q14690 1871 aaKnown RBP6.78□□□□□ -1.32
GABRB3-216ENST00000628124 LOXL1Q08397 574 aaPredicted RBP6.78□□□□□ -1.32
GABRB3-216ENST00000628124 LINC00474Q9P2X8 69 aa6.78□□□□□ -1.32
GABRB3-216ENST00000628124 PTH2Q96A98 100 aa6.78□□□□□ -1.32
GABRB3-216ENST00000628124 PIP4P1Q86T03 277 aa6.77□□□□□ -1.33
GABRB3-216ENST00000628124 CHD3Q12873 2000 aaKnown RBP6.77□□□□□ -1.33
GABRB3-216ENST00000628124 TRAV10A0A0B4J240 114 aa6.77□□□□□ -1.33
GABRB3-216ENST00000628124 PRYO14603 147 aa6.77□□□□□ -1.33
GABRB3-216ENST00000628124 IGF2-ASQ6U949 168 aa6.77□□□□□ -1.33
GABRB3-216ENST00000628124 Q6ZVQ6 151 aa6.77□□□□□ -1.33
GABRB3-216ENST00000628124 MUC7Q8TAX7 377 aa6.77□□□□□ -1.33
GABRB3-216ENST00000628124 RNASE8Q8TDE3 154 aaKnown RBP6.77□□□□□ -1.33
GABRB3-216ENST00000628124 RALGAPA2Q2PPJ7 1873 aa6.77□□□□□ -1.33
GABRB3-216ENST00000628124 LY6LH3BQJ8 138 aa6.77□□□□□ -1.33
GABRB3-216ENST00000628124 M0R378 163 aa6.77□□□□□ -1.33
GABRB3-216ENST00000628124 P0DMU3 169 aa6.77□□□□□ -1.33
GABRB3-216ENST00000628124 FAM231AP0DMU4 169 aa6.77□□□□□ -1.33
GABRB3-216ENST00000628124 FAM231CP0DMU5 169 aa6.77□□□□□ -1.33
GABRB3-216ENST00000628124 SHISA2Q6UWI4 295 aa6.77□□□□□ -1.33
GABRB3-216ENST00000628124 LYPD6Q86Y78 171 aa6.77□□□□□ -1.33
GABRB3-216ENST00000628124 A6NDX4 124 aa6.76□□□□□ -1.33
GABRB3-216ENST00000628124 CACNA1HO95180 2353 aa6.76□□□□□ -1.33
GABRB3-216ENST00000628124 IGFL2Q6UWQ7 119 aa6.76□□□□□ -1.33
GABRB3-216ENST00000628124 MRPS36P82909 103 aaKnown RBP6.76□□□□□ -1.33
GABRB3-216ENST00000628124 NRXN2Q9P2S2 1712 aa6.76□□□□□ -1.33
GABRB3-216ENST00000628124 TRBV30A0A0K0K1B3 111 aa6.76□□□□□ -1.33
GABRB3-216ENST00000628124 TIMM17BO60830 172 aa6.76□□□□□ -1.33
GABRB3-216ENST00000628124 WFDC13Q8IUB5 93 aa6.76□□□□□ -1.33
GABRB3-216ENST00000628124 LRRC75A-AS1Q8N1F1 130 aa6.76□□□□□ -1.33
GABRB3-216ENST00000628124 LINC00308Q8TCZ7 52 aa6.76□□□□□ -1.33
GABRB3-216ENST00000628124 U3KQA8 63 aa6.76□□□□□ -1.33
GABRB3-216ENST00000628124 TP53BP1Q12888 1972 aaPredicted RBP6.76□□□□□ -1.33
GABRB3-216ENST00000628124 EML6Q6ZMW3 1958 aa6.76□□□□□ -1.33
GABRB3-216ENST00000628124 GRNP28799 593 aaKnown RBP6.76□□□□□ -1.33
GABRB3-216ENST00000628124 Q6ZTI0 123 aa6.76□□□□□ -1.33
GABRB3-216ENST00000628124 RNF185Q96GF1 192 aa6.76□□□□□ -1.33
GABRB3-216ENST00000628124 UBR3Q6ZT12 1888 aa6.75□□□□□ -1.33
GABRB3-216ENST00000628124 TRBV27A0A0K0K1C4 114 aa6.75□□□□□ -1.33
GABRB3-216ENST00000628124 C1orf195Q5TG92 126 aa6.75□□□□□ -1.33
GABRB3-216ENST00000628124 TRBV6-4A0A1B0GX49 114 aa6.75□□□□□ -1.33
GABRB3-216ENST00000628124 DNAJC9-AS1A6NH13 148 aa6.75□□□□□ -1.33
GABRB3-216ENST00000628124 TNFRSF13BO14836 293 aaPredicted RBP6.75□□□□□ -1.33
GABRB3-216ENST00000628124 IGLV1-47P01700 117 aa6.75□□□□□ -1.33
GABRB3-216ENST00000628124 ZFP36P26651 326 aaKnown RBP6.75□□□□□ -1.33
GABRB3-216ENST00000628124 C6orf99Q4VX62 202 aa6.75□□□□□ -1.33
GABRB3-216ENST00000628124 A0A0J9YWU9 116 aa6.75□□□□□ -1.33
GABRB3-216ENST00000628124 C19orf71A6NCJ1 209 aa6.75□□□□□ -1.33
GABRB3-216ENST00000628124 NUPR1O60356 82 aa6.75□□□□□ -1.33
GABRB3-216ENST00000628124 MED12Q93074 2177 aa6.75□□□□□ -1.33
GABRB3-216ENST00000628124 PLCE1Q9P212 2302 aa6.75□□□□□ -1.33
GABRB3-216ENST00000628124 COL4A5P29400 1685 aa6.75□□□□□ -1.33
GABRB3-216ENST00000628124 GTF3C1Q12789 2109 aa6.75□□□□□ -1.33
GABRB3-216ENST00000628124 IGLV4-69A0A075B6H9 119 aa6.74□□□□□ -1.33
GABRB3-216ENST00000628124 LOC107984640A0A0U1RRK4 108 aa6.74□□□□□ -1.33
GABRB3-216ENST00000628124 CEMP1Q6PRD7 247 aaPredicted RBP6.74□□□□□ -1.33
GABRB3-216ENST00000628124 CDKN2A-AS1Q9UH64 79 aa6.74□□□□□ -1.33
GABRB3-216ENST00000628124 TRBV6-8A0A0A6YYG3 113 aa6.74□□□□□ -1.33
GABRB3-216ENST00000628124 C3orf84H3BNL1 204 aa6.74□□□□□ -1.33
GABRB3-216ENST00000628124 THSD7AQ9UPZ6 1657 aa6.74□□□□□ -1.33
GABRB3-216ENST00000628124 BRCA1P38398 1863 aaKnown RBP6.74□□□□□ -1.33
GABRB3-216ENST00000628124 TMEM223A0PJW6 202 aa6.74□□□□□ -1.33
GABRB3-216ENST00000628124 NDUFA7O95182 113 aa6.74□□□□□ -1.33
GABRB3-216ENST00000628124 TAF1LQ8IZX4 1826 aa6.73□□□□□ -1.33
GABRB3-216ENST00000628124 PHF3Q92576 2039 aaKnown RBP6.73□□□□□ -1.33
GABRB3-216ENST00000628124 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.73□□□□□ -1.33
GABRB3-216ENST00000628124 RITA1Q96K30 269 aa6.73□□□□□ -1.33
GABRB3-216ENST00000628124 MALRD1Q5VYJ5 2156 aa6.73□□□□□ -1.33
GABRB3-216ENST00000628124 A0A1B0GXF2 115 aa6.73□□□□□ -1.33
GABRB3-216ENST00000628124 LINC00467Q9BRT7 94 aa6.73□□□□□ -1.33
GABRB3-216ENST00000628124 SMIM26A0A096LP01 95 aa6.73□□□□□ -1.33
GABRB3-216ENST00000628124 XAGE1AQ9HD64 81 aa6.73□□□□□ -1.33
GABRB3-216ENST00000628124 MT-ATP8P03928 68 aa6.73□□□□□ -1.33
GABRB3-216ENST00000628124 SLPIP03973 132 aa6.72□□□□□ -1.33
GABRB3-216ENST00000628124 ZNF22P17026 224 aaPredicted RBP6.72□□□□□ -1.33
GABRB3-216ENST00000628124 TDRG1Q3Y452 100 aa6.72□□□□□ -1.33
GABRB3-216ENST00000628124 NEXN-AS1Q8NBZ9 246 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms