RNA–Protein interactions for RNA: ENST00000622991.1

PCDHB6-202, Transcript of protocadherin beta 6, humanhuman

TSL 2 BASIC

Gene PCDHB6, Length 2,608 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB6-202ENST00000622991 GAGE12FP0CL80 117 aa12□□□□□ -0.49
PCDHB6-202ENST00000622991 GAGE12GP0CL81 117 aa12□□□□□ -0.49
PCDHB6-202ENST00000622991 GAGE12IP0CL82 117 aa12□□□□□ -0.49
PCDHB6-202ENST00000622991 PSMB2P49721 201 aa12□□□□□ -0.49
PCDHB6-202ENST00000622991 GAGE4Q13068 117 aa12□□□□□ -0.49
PCDHB6-202ENST00000622991 KHDC1LQ5JSQ8 128 aa12□□□□□ -0.49
PCDHB6-202ENST00000622991 TEN1Q86WV5 123 aa12□□□□□ -0.49
PCDHB6-202ENST00000622991 TMEM86BQ8N661 226 aa12□□□□□ -0.49
PCDHB6-202ENST00000622991 RAX2Q96IS3 184 aa12□□□□□ -0.49
PCDHB6-202ENST00000622991 CCDC179H3BU77 68 aa11.99□□□□□ -0.49
PCDHB6-202ENST00000622991 ZNF688P0C7X2 276 aa11.99□□□□□ -0.49
PCDHB6-202ENST00000622991 CITED1Q99966 193 aa11.99□□□□□ -0.49
PCDHB6-202ENST00000622991 MSRB1Q9NZV6 116 aa11.99□□□□□ -0.49
PCDHB6-202ENST00000622991 IGLC6P0CF74 106 aa11.99□□□□□ -0.49
PCDHB6-202ENST00000622991 ZFAND2AQ8N6M9 145 aa11.98□□□□□ -0.49
PCDHB6-202ENST00000622991 KIR2DL4Q99706 377 aa11.98□□□□□ -0.49
PCDHB6-202ENST00000622991 ATP5LO75964 103 aa11.98□□□□□ -0.49
PCDHB6-202ENST00000622991 LINC01559Q495D7 138 aa11.98□□□□□ -0.49
PCDHB6-202ENST00000622991 OR10J6PQ8NGY7 276 aa11.98□□□□□ -0.49
PCDHB6-202ENST00000622991 SETXQ7Z333 2677 aaKnown RBP11.98□□□□□ -0.49
PCDHB6-202ENST00000622991 RHODO00212 210 aa11.97□□□□□ -0.49
PCDHB6-202ENST00000622991 NDUFV3P56181 108 aaKnown RBP11.97□□□□□ -0.49
PCDHB6-202ENST00000622991 MAP1LC3AQ9H492 121 aa11.97□□□□□ -0.49
PCDHB6-202ENST00000622991 LOC107984156A0A0G2JMH3 177 aa11.97□□□□□ -0.49
PCDHB6-202ENST00000622991 TMEM262E9PQX1 116 aa11.97□□□□□ -0.49
PCDHB6-202ENST00000622991 OVOL1O14753 267 aa11.97□□□□□ -0.49
PCDHB6-202ENST00000622991 ARL17AQ8IVW1 177 aa11.97□□□□□ -0.49
PCDHB6-202ENST00000622991 LINC00477Q96M19 166 aa11.96□□□□□ -0.49
PCDHB6-202ENST00000622991 TRBV20-1A0A075B6N2 111 aa11.96□□□□□ -0.5
PCDHB6-202ENST00000622991 LGALS9O00182 355 aa11.96□□□□□ -0.5
PCDHB6-202ENST00000622991 SFTA2Q6UW10 78 aa11.96□□□□□ -0.5
PCDHB6-202ENST00000622991 MRPL35Q9NZE8 188 aaKnown RBP11.96□□□□□ -0.5
PCDHB6-202ENST00000622991 ZFP2Q6ZN57 461 aa11.95□□□□□ -0.5
PCDHB6-202ENST00000622991 SPRY2O43597 315 aa11.95□□□□□ -0.5
PCDHB6-202ENST00000622991 GAGE2BQ13066 116 aa11.95□□□□□ -0.5
PCDHB6-202ENST00000622991 GAGE2EQ4V326 116 aa11.95□□□□□ -0.5
PCDHB6-202ENST00000622991 KLHL30-AS1Q8NEE0 82 aa11.95□□□□□ -0.5
PCDHB6-202ENST00000622991 GAGE2DQ9UEU5 116 aa11.95□□□□□ -0.5
PCDHB6-202ENST00000622991 LINC01549A6NIU2 74 aa11.94□□□□□ -0.5
PCDHB6-202ENST00000622991 LINC01546A6NGU7 62 aa11.94□□□□□ -0.5
PCDHB6-202ENST00000622991 LINC01619G3V211 115 aa11.94□□□□□ -0.5
PCDHB6-202ENST00000622991 SRSF2Q01130 221 aaKnown RBP11.94□□□□□ -0.5
PCDHB6-202ENST00000622991 FAM19A4Q96LR4 140 aa11.94□□□□□ -0.5
PCDHB6-202ENST00000622991 A0A087WX48 190 aa11.93□□□□□ -0.5
PCDHB6-202ENST00000622991 RNASE4P34096 147 aaKnown RBP11.93□□□□□ -0.5
PCDHB6-202ENST00000622991 C4orf3Q8WVX3 66 aa11.93□□□□□ -0.5
PCDHB6-202ENST00000622991 FLNBO75369 2602 aaKnown RBP11.93□□□□□ -0.5
PCDHB6-202ENST00000622991 A0A1W2PRX2 142 aa11.93□□□□□ -0.5
PCDHB6-202ENST00000622991 TTC32Q5I0X7 151 aa11.93□□□□□ -0.5
PCDHB6-202ENST00000622991 LENEPQ9Y5L5 61 aa11.93□□□□□ -0.5
PCDHB6-202ENST00000622991 HIVEP1P15822 2718 aa11.93□□□□□ -0.5
PCDHB6-202ENST00000622991 A8MWV9 139 aa11.92□□□□□ -0.5
PCDHB6-202ENST00000622991 K7EQG2 157 aa11.92□□□□□ -0.5
PCDHB6-202ENST00000622991 IGKV3-20P01619 116 aa11.92□□□□□ -0.5
PCDHB6-202ENST00000622991 CD28P10747 220 aa11.92□□□□□ -0.5
PCDHB6-202ENST00000622991 IFITM1P13164 125 aa11.92□□□□□ -0.5
PCDHB6-202ENST00000622991 ID1P41134 155 aa11.92□□□□□ -0.5
PCDHB6-202ENST00000622991 NXT2Q9NPJ8 142 aaKnown RBP11.92□□□□□ -0.5
PCDHB6-202ENST00000622991 MYMXA0A1B0GTQ4 84 aa11.91□□□□□ -0.5
PCDHB6-202ENST00000622991 H3BVH4 76 aa11.91□□□□□ -0.5
PCDHB6-202ENST00000622991 SNCGO76070 127 aa11.91□□□□□ -0.5
PCDHB6-202ENST00000622991 ANKRD29Q8N6D5 301 aa11.91□□□□□ -0.5
PCDHB6-202ENST00000622991 CNFNQ9BYD5 112 aa11.91□□□□□ -0.5
PCDHB6-202ENST00000622991 GAS8-AS1O95177 125 aa11.91□□□□□ -0.5
PCDHB6-202ENST00000622991 LINC01006Q8NI28 216 aa11.91□□□□□ -0.5
PCDHB6-202ENST00000622991 UBE2D3P61077 147 aa11.9□□□□□ -0.5
PCDHB6-202ENST00000622991 UBE2D2P62837 147 aa11.9□□□□□ -0.5
PCDHB6-202ENST00000622991 LYRM7Q5U5X0 104 aa11.9□□□□□ -0.5
PCDHB6-202ENST00000622991 LY6G6DO95868 133 aa11.9□□□□□ -0.5
PCDHB6-202ENST00000622991 SBSPONQ8IVN8 264 aa11.9□□□□□ -0.5
PCDHB6-202ENST00000622991 NSD1Q96L73 2696 aaPredicted RBP11.9□□□□□ -0.5
PCDHB6-202ENST00000622991 FN1P02751 2386 aaKnown RBP11.9□□□□□ -0.5
PCDHB6-202ENST00000622991 TRAV4A0A0B4J268 109 aa11.9□□□□□ -0.51
PCDHB6-202ENST00000622991 TNFRSF6BO95407 300 aa11.9□□□□□ -0.51
PCDHB6-202ENST00000622991 RNASE1P07998 156 aaKnown RBP11.9□□□□□ -0.51
PCDHB6-202ENST00000622991 RNF185Q96GF1 192 aa11.9□□□□□ -0.51
PCDHB6-202ENST00000622991 TCL1BO95988 128 aa11.89□□□□□ -0.51
PCDHB6-202ENST00000622991 TRAV21A0A0B4J279 112 aa11.89□□□□□ -0.51
PCDHB6-202ENST00000622991 GNRH2O43555 120 aa11.89□□□□□ -0.51
PCDHB6-202ENST00000622991 SNRPD3P62318 126 aaKnown RBP11.89□□□□□ -0.51
PCDHB6-202ENST00000622991 FAM159AQ6UWV7 190 aa11.89□□□□□ -0.51
PCDHB6-202ENST00000622991 CITED2Q99967 270 aaPredicted RBP11.89□□□□□ -0.51
PCDHB6-202ENST00000622991 PLNP26678 52 aa11.88□□□□□ -0.51
PCDHB6-202ENST00000622991 APRG1Q8IVJ8 170 aa11.88□□□□□ -0.51
PCDHB6-202ENST00000622991 A0A0J9YX75 114 aa11.88□□□□□ -0.51
PCDHB6-202ENST00000622991 UBE2D1P51668 147 aa11.88□□□□□ -0.51
PCDHB6-202ENST00000622991 TMEM61Q8N0U2 210 aa11.88□□□□□ -0.51
PCDHB6-202ENST00000622991 TRAV12-2A0A075B6T6 113 aa11.87□□□□□ -0.51
PCDHB6-202ENST00000622991 KLLNB2CW77 178 aa11.87□□□□□ -0.51
PCDHB6-202ENST00000622991 CRLF1O75462 422 aa11.87□□□□□ -0.51
PCDHB6-202ENST00000622991 ASIPP42127 132 aa11.87□□□□□ -0.51
PCDHB6-202ENST00000622991 HILS1P60008 231 aa11.87□□□□□ -0.51
PCDHB6-202ENST00000622991 TRAV12-3A0A0B4J271 114 aa11.86□□□□□ -0.51
PCDHB6-202ENST00000622991 GATA1P15976 413 aaPredicted RBP11.86□□□□□ -0.51
PCDHB6-202ENST00000622991 Q8N8P6 123 aa11.86□□□□□ -0.51
PCDHB6-202ENST00000622991 JMJD1CQ15652 2540 aa11.85□□□□□ -0.51
PCDHB6-202ENST00000622991 Q6Q795 121 aa11.85□□□□□ -0.51
PCDHB6-202ENST00000622991 SPANXA1Q9NS26 97 aa11.85□□□□□ -0.51
PCDHB6-202ENST00000622991 C2CD3Q4AC94 2353 aa11.85□□□□□ -0.51
PCDHB6-202ENST00000622991 KNCNA6PVL3 124 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms