RNA–Protein interactions for RNA: ENST00000622647.3

ZNF48-206, Transcript of zinc finger protein 48, humanhuman

TSL 4 BASIC

Gene ZNF48, Length 2,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48-206ENST00000622647 PPP1R17O96001 155 aa12.98□□□□□ -0.33
ZNF48-206ENST00000622647 TSHBP01222 138 aa12.98□□□□□ -0.33
ZNF48-206ENST00000622647 AMMECR1LQ6DCA0 310 aa12.98□□□□□ -0.33
ZNF48-206ENST00000622647 LINC01587Q99440 93 aa12.98□□□□□ -0.33
ZNF48-206ENST00000622647 KIR2DL4Q99706 377 aa12.98□□□□□ -0.33
ZNF48-206ENST00000622647 VCYO14598 125 aa12.97□□□□□ -0.33
ZNF48-206ENST00000622647 GCSHP23434 173 aa12.97□□□□□ -0.33
ZNF48-206ENST00000622647 CYSLTR1Q9Y271 337 aa12.97□□□□□ -0.33
ZNF48-206ENST00000622647 TMEM86BQ8N661 226 aa12.97□□□□□ -0.33
ZNF48-206ENST00000622647 TRGV11A0A075B6L2 103 aa12.96□□□□□ -0.33
ZNF48-206ENST00000622647 TRBV25-1A0A075B6N4 114 aa12.96□□□□□ -0.33
ZNF48-206ENST00000622647 HIVEP2P31629 2446 aa12.96□□□□□ -0.33
ZNF48-206ENST00000622647 LINC01006Q8NI28 216 aa12.96□□□□□ -0.33
ZNF48-206ENST00000622647 PLNP26678 52 aa12.95□□□□□ -0.34
ZNF48-206ENST00000622647 HSD52Q0P140 79 aa12.95□□□□□ -0.34
ZNF48-206ENST00000622647 UBE2V1Q13404 147 aa12.95□□□□□ -0.34
ZNF48-206ENST00000622647 CHAC1Q9BUX1 264 aa12.95□□□□□ -0.34
ZNF48-206ENST00000622647 FOSL1P15407 271 aa12.95□□□□□ -0.34
ZNF48-206ENST00000622647 ODF3L2Q3SX64 289 aa12.95□□□□□ -0.34
ZNF48-206ENST00000622647 TRAV12-1A0A0B4J245 112 aa12.94□□□□□ -0.34
ZNF48-206ENST00000622647 MRPL16Q9NX20 251 aaKnown RBP12.94□□□□□ -0.34
ZNF48-206ENST00000622647 FXYD2P54710 66 aa12.94□□□□□ -0.34
ZNF48-206ENST00000622647 Q6ZSN1 163 aa12.94□□□□□ -0.34
ZNF48-206ENST00000622647 NSUN5P1Q3KNT7 163 aa12.93□□□□□ -0.34
ZNF48-206ENST00000622647 JMJD8Q96S16 334 aa12.93□□□□□ -0.34
ZNF48-206ENST00000622647 AZU1P20160 251 aa12.93□□□□□ -0.34
ZNF48-206ENST00000622647 IGIPA6NJ69 53 aa12.92□□□□□ -0.34
ZNF48-206ENST00000622647 K7ERJ3 54 aa12.92□□□□□ -0.34
ZNF48-206ENST00000622647 SIVA1O15304 175 aa12.92□□□□□ -0.34
ZNF48-206ENST00000622647 WFDC10AQ9H1F0 79 aa12.92□□□□□ -0.34
ZNF48-206ENST00000622647 TRBV27A0A0K0K1C4 114 aa12.92□□□□□ -0.34
ZNF48-206ENST00000622647 SPAG8Q99932 426 aaPredicted RBP12.92□□□□□ -0.34
ZNF48-206ENST00000622647 FN1P02751 2386 aaKnown RBP12.91□□□□□ -0.34
ZNF48-206ENST00000622647 C11orf86A6NJI1 115 aa12.91□□□□□ -0.34
ZNF48-206ENST00000622647 H3BUT2 72 aa12.91□□□□□ -0.34
ZNF48-206ENST00000622647 SEC11AP67812 179 aa12.91□□□□□ -0.34
ZNF48-206ENST00000622647 TRPT1Q86TN4 253 aaKnown RBP12.91□□□□□ -0.34
ZNF48-206ENST00000622647 C2CD3Q4AC94 2353 aa12.91□□□□□ -0.34
ZNF48-206ENST00000622647 OR4C5Q8NGB2 326 aa12.91□□□□□ -0.34
ZNF48-206ENST00000622647 SAP30O75446 220 aa12.9□□□□□ -0.34
ZNF48-206ENST00000622647 STHQ8IWL8 128 aa12.9□□□□□ -0.34
ZNF48-206ENST00000622647 OR11H12B2RN74 326 aa12.9□□□□□ -0.34
ZNF48-206ENST00000622647 OR11H2Q8NH07 326 aa12.9□□□□□ -0.34
ZNF48-206ENST00000622647 TRBV6-5A0A0K0K1A5 114 aa12.89□□□□□ -0.35
ZNF48-206ENST00000622647 A6NDN8 102 aa12.89□□□□□ -0.35
ZNF48-206ENST00000622647 TEX29Q8N6K0 151 aa12.89□□□□□ -0.35
ZNF48-206ENST00000622647 PRADC1Q9BSG0 188 aa12.89□□□□□ -0.35
ZNF48-206ENST00000622647 CEMP1Q6PRD7 247 aaPredicted RBP12.89□□□□□ -0.35
ZNF48-206ENST00000622647 IGLV4-69A0A075B6H9 119 aa12.88□□□□□ -0.35
ZNF48-206ENST00000622647 IGHV3-38A0A0C4DH36 116 aa12.88□□□□□ -0.35
ZNF48-206ENST00000622647 FHL3Q13643 280 aa12.88□□□□□ -0.35
ZNF48-206ENST00000622647 CST9LQ9H4G1 147 aa12.88□□□□□ -0.35
ZNF48-206ENST00000622647 M0R2P5 195 aa12.88□□□□□ -0.35
ZNF48-206ENST00000622647 INSP01308 110 aa12.88□□□□□ -0.35
ZNF48-206ENST00000622647 RNASE13Q5GAN3 156 aaKnown RBP12.88□□□□□ -0.35
ZNF48-206ENST00000622647 TSSC4Q9Y5U2 329 aaPredicted RBP12.88□□□□□ -0.35
ZNF48-206ENST00000622647 A8MTW9 85 aa12.87□□□□□ -0.35
ZNF48-206ENST00000622647 RPL32P62910 135 aaKnown RBP12.87□□□□□ -0.35
ZNF48-206ENST00000622647 ZNF415Q09FC8 603 aa12.87□□□□□ -0.35
ZNF48-206ENST00000622647 PMVKQ15126 192 aa12.87□□□□□ -0.35
ZNF48-206ENST00000622647 TMEM170BQ5T4T1 132 aa12.87□□□□□ -0.35
ZNF48-206ENST00000622647 TRAV2A0A0B4J234 112 aa12.87□□□□□ -0.35
ZNF48-206ENST00000622647 I3L3M4 83 aa12.87□□□□□ -0.35
ZNF48-206ENST00000622647 PHLDA1Q8WV24 401 aaPredicted RBP12.87□□□□□ -0.35
ZNF48-206ENST00000622647 NHP2Q9NX24 153 aaKnown RBP12.87□□□□□ -0.35
ZNF48-206ENST00000622647 RNASE1P07998 156 aaKnown RBP12.86□□□□□ -0.35
ZNF48-206ENST00000622647 ZNRF2Q8NHG8 242 aa12.86□□□□□ -0.35
ZNF48-206ENST00000622647 CFAP126Q5VTH2 177 aa12.86□□□□□ -0.35
ZNF48-206ENST00000622647 C11orf72Q8NBR9 251 aa12.86□□□□□ -0.35
ZNF48-206ENST00000622647 HIST1H4GQ99525 98 aa12.86□□□□□ -0.35
ZNF48-206ENST00000622647 IGHV3-64A0A075B6Q5 118 aa12.85□□□□□ -0.35
ZNF48-206ENST00000622647 RIPPLY3P57055 190 aa12.85□□□□□ -0.35
ZNF48-206ENST00000622647 TNFRSF18Q9Y5U5 241 aa12.85□□□□□ -0.35
ZNF48-206ENST00000622647 MYMXA0A1B0GTQ4 84 aa12.85□□□□□ -0.35
ZNF48-206ENST00000622647 H3BRM9 83 aa12.85□□□□□ -0.35
ZNF48-206ENST00000622647 IGHV3-53P01767 116 aa12.85□□□□□ -0.35
ZNF48-206ENST00000622647 RPL35AP18077 110 aaKnown RBP12.85□□□□□ -0.35
ZNF48-206ENST00000622647 SCGB2A2Q13296 93 aa12.85□□□□□ -0.35
ZNF48-206ENST00000622647 C1orf158Q8N1D5 194 aa12.85□□□□□ -0.35
ZNF48-206ENST00000622647 PLEKHB2Q96CS7 222 aa12.85□□□□□ -0.35
ZNF48-206ENST00000622647 HIGD1BQ9P298 99 aa12.85□□□□□ -0.35
ZNF48-206ENST00000622647 C9orf118A6NHY6 69 aa12.84□□□□□ -0.35
ZNF48-206ENST00000622647 ZNF815PA8K554 130 aa12.84□□□□□ -0.35
ZNF48-206ENST00000622647 CEND1Q8N111 149 aa12.84□□□□□ -0.35
ZNF48-206ENST00000622647 C20orf203Q8NBC4 194 aa12.84□□□□□ -0.35
ZNF48-206ENST00000622647 OTOGQ6ZRI0 2925 aa12.84□□□□□ -0.35
ZNF48-206ENST00000622647 ZNF418Q8TF45 676 aaPredicted RBP12.84□□□□□ -0.35
ZNF48-206ENST00000622647 SMIM13P0DJ93 91 aa12.83□□□□□ -0.36
ZNF48-206ENST00000622647 TMEM141Q96I45 108 aa12.83□□□□□ -0.36
ZNF48-206ENST00000622647 TRGV1A0A0A0MS02 117 aa12.83□□□□□ -0.36
ZNF48-206ENST00000622647 TIMM17AQ99595 171 aa12.83□□□□□ -0.36
ZNF48-206ENST00000622647 A8MWV9 139 aa12.82□□□□□ -0.36
ZNF48-206ENST00000622647 E9PLD3 99 aa12.82□□□□□ -0.36
ZNF48-206ENST00000622647 SCGB1D4Q6XE38 83 aa12.82□□□□□ -0.36
ZNF48-206ENST00000622647 UFSP1Q6NVU6 142 aa12.82□□□□□ -0.36
ZNF48-206ENST00000622647 GAGE10A6NGK3 116 aa12.81□□□□□ -0.36
ZNF48-206ENST00000622647 TSPEAR-AS2P59090 65 aa12.81□□□□□ -0.36
ZNF48-206ENST00000622647 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.81□□□□□ -0.36
ZNF48-206ENST00000622647 A0A0J9YXV3 536 aa12.81□□□□□ -0.36
ZNF48-206ENST00000622647 IGKV2-29A2NJV5 120 aaPredicted RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms