RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 RPS10P46783 165 aaKnown RBP9.41□□□□□ -0.9
NEK3-210ENST00000620675 MRPL23Q16540 153 aaKnown RBP9.41□□□□□ -0.9
NEK3-210ENST00000620675 SMIM15Q7Z3B0 74 aa9.41□□□□□ -0.9
NEK3-210ENST00000620675 CBLN2Q8IUK8 224 aa9.41□□□□□ -0.9
NEK3-210ENST00000620675 BTF3L4Q96K17 158 aa9.41□□□□□ -0.9
NEK3-210ENST00000620675 LINC00588Q9Y4M8 146 aa9.41□□□□□ -0.9
NEK3-210ENST00000620675 RYR3Q15413 4870 aa9.41□□□□□ -0.9
NEK3-210ENST00000620675 TGIF2-C20orf24A0A0A6YYL0 155 aa9.4□□□□□ -0.9
NEK3-210ENST00000620675 FAM104BQ5XKR9 115 aa9.4□□□□□ -0.9
NEK3-210ENST00000620675 DNAH2Q9P225 4427 aa9.4□□□□□ -0.91
NEK3-210ENST00000620675 IGHV3-38A0A0C4DH36 116 aa9.4□□□□□ -0.91
NEK3-210ENST00000620675 TCTAP57738 103 aa9.4□□□□□ -0.91
NEK3-210ENST00000620675 MRPL51Q4U2R6 128 aaKnown RBP9.4□□□□□ -0.91
NEK3-210ENST00000620675 ATP5L2Q7Z4Y8 100 aa9.4□□□□□ -0.91
NEK3-210ENST00000620675 LINC00476Q8WZB0 136 aa9.4□□□□□ -0.91
NEK3-210ENST00000620675 DNAH10Q8IVF4 4471 aa9.39□□□□□ -0.91
NEK3-210ENST00000620675 SCO1O75880 301 aa9.39□□□□□ -0.91
NEK3-210ENST00000620675 ELOBQ15370 118 aa9.39□□□□□ -0.91
NEK3-210ENST00000620675 KCNIP4Q6PIL6 250 aa9.39□□□□□ -0.91
NEK3-210ENST00000620675 LYPD5Q6UWN5 251 aa9.39□□□□□ -0.91
NEK3-210ENST00000620675 TRBV7-3A0A075B6L6 115 aa9.38□□□□□ -0.91
NEK3-210ENST00000620675 LY6G6CO95867 125 aa9.38□□□□□ -0.91
NEK3-210ENST00000620675 UBE2D3P61077 147 aa9.38□□□□□ -0.91
NEK3-210ENST00000620675 UBE2D2P62837 147 aa9.38□□□□□ -0.91
NEK3-210ENST00000620675 RASL11AQ6T310 242 aa9.38□□□□□ -0.91
NEK3-210ENST00000620675 NEGR1Q7Z3B1 354 aa9.38□□□□□ -0.91
NEK3-210ENST00000620675 YPEL4Q96NS1 127 aa9.38□□□□□ -0.91
NEK3-210ENST00000620675 TRBV10-1A0A0K0K1A3 114 aa9.38□□□□□ -0.91
NEK3-210ENST00000620675 A0A1B0GW15 77 aa9.38□□□□□ -0.91
NEK3-210ENST00000620675 S100PP25815 95 aa9.38□□□□□ -0.91
NEK3-210ENST00000620675 TMEM136Q6ZRR5 245 aa9.38□□□□□ -0.91
NEK3-210ENST00000620675 ATP6V0E2Q8NHE4 81 aa9.38□□□□□ -0.91
NEK3-210ENST00000620675 ATP6V1G1O75348 118 aa9.37□□□□□ -0.91
NEK3-210ENST00000620675 RPL36AP83881 106 aaKnown RBP9.36□□□□□ -0.91
NEK3-210ENST00000620675 NRACQ8N912 160 aa9.36□□□□□ -0.91
NEK3-210ENST00000620675 RPL36ALQ969Q0 106 aaKnown RBP9.36□□□□□ -0.91
NEK3-210ENST00000620675 NIT2Q9NQR4 276 aa9.36□□□□□ -0.91
NEK3-210ENST00000620675 LGALS9CQ6DKI2 356 aa9.36□□□□□ -0.91
NEK3-210ENST00000620675 FRAS1Q86XX4 4008 aa9.35□□□□□ -0.91
NEK3-210ENST00000620675 TRAV9-1A0A075B6T8 112 aa9.35□□□□□ -0.91
NEK3-210ENST00000620675 D6R8Y8 96 aa9.35□□□□□ -0.91
NEK3-210ENST00000620675 H7C1H1 209 aa9.35□□□□□ -0.91
NEK3-210ENST00000620675 LCE6AA0A183 80 aa9.35□□□□□ -0.91
NEK3-210ENST00000620675 S100A8P05109 93 aa9.35□□□□□ -0.91
NEK3-210ENST00000620675 KIAA1644Q3SXP7 199 aa9.35□□□□□ -0.91
NEK3-210ENST00000620675 UBE2DNLQ8IWF7 75 aa9.35□□□□□ -0.91
NEK3-210ENST00000620675 GTSF1LQ9H1H1 148 aa9.35□□□□□ -0.91
NEK3-210ENST00000620675 TNFRSF18Q9Y5U5 241 aa9.35□□□□□ -0.91
NEK3-210ENST00000620675 CCL18P55774 89 aa9.34□□□□□ -0.91
NEK3-210ENST00000620675 OR10J3Q5JRS4 329 aa9.34□□□□□ -0.91
NEK3-210ENST00000620675 NTM-AS1Q6ZSK4 140 aa9.34□□□□□ -0.91
NEK3-210ENST00000620675 WFDC10BQ8IUB3 73 aa9.34□□□□□ -0.91
NEK3-210ENST00000620675 MRAP2Q96G30 205 aa9.34□□□□□ -0.91
NEK3-210ENST00000620675 CKS2P33552 79 aa9.33□□□□□ -0.92
NEK3-210ENST00000620675 Q8N3U1 123 aa9.33□□□□□ -0.92
NEK3-210ENST00000620675 IGLV2-18A0A075B6J9 118 aa9.33□□□□□ -0.92
NEK3-210ENST00000620675 TRBV24-1A0A075B6N3 115 aa9.33□□□□□ -0.92
NEK3-210ENST00000620675 NPYP01303 97 aa9.33□□□□□ -0.92
NEK3-210ENST00000620675 SMCO4Q9NRQ5 59 aa9.33□□□□□ -0.92
NEK3-210ENST00000620675 MRPS16Q9Y3D3 137 aaKnown RBP9.33□□□□□ -0.92
NEK3-210ENST00000620675 SDHAF1A6NFY7 115 aa9.32□□□□□ -0.92
NEK3-210ENST00000620675 DNAJC30Q96LL9 226 aa9.32□□□□□ -0.92
NEK3-210ENST00000620675 GNB1LQ9BYB4 327 aa9.32□□□□□ -0.92
NEK3-210ENST00000620675 TRBV6-5A0A0K0K1A5 114 aa9.31□□□□□ -0.92
NEK3-210ENST00000620675 TNFRSF6BO95407 300 aa9.31□□□□□ -0.92
NEK3-210ENST00000620675 SH2D6Q7Z4S9 175 aa9.31□□□□□ -0.92
NEK3-210ENST00000620675 TMEM70Q9BUB7 260 aa9.31□□□□□ -0.92
NEK3-210ENST00000620675 POLR2KP53803 58 aaKnown RBP9.3□□□□□ -0.92
NEK3-210ENST00000620675 KRTAP1-5Q9BYS1 174 aa9.3□□□□□ -0.92
NEK3-210ENST00000620675 APCSP02743 223 aa9.3□□□□□ -0.92
NEK3-210ENST00000620675 TIRAPP58753 221 aa9.3□□□□□ -0.92
NEK3-210ENST00000620675 LELP1Q5T871 98 aa9.3□□□□□ -0.92
NEK3-210ENST00000620675 DAZ4Q86SG3 579 aaKnown RBP9.3□□□□□ -0.92
NEK3-210ENST00000620675 ORMDL3Q8N138 153 aa9.3□□□□□ -0.92
NEK3-210ENST00000620675 FRZBQ92765 325 aa9.3□□□□□ -0.92
NEK3-210ENST00000620675 PRELID3AQ96N28 172 aa9.3□□□□□ -0.92
NEK3-210ENST00000620675 UPK3BQ9BT76 320 aa9.3□□□□□ -0.92
NEK3-210ENST00000620675 MRPL18Q9H0U6 180 aaKnown RBP9.3□□□□□ -0.92
NEK3-210ENST00000620675 Q9H8V8 135 aa9.3□□□□□ -0.92
NEK3-210ENST00000620675 ST20Q9HBF5 79 aa9.3□□□□□ -0.92
NEK3-210ENST00000620675 DAZ3Q9NR90 486 aaKnown RBP9.3□□□□□ -0.92
NEK3-210ENST00000620675 TRBV6-8A0A0A6YYG3 113 aa9.29□□□□□ -0.92
NEK3-210ENST00000620675 M0R2N4 97 aa9.29□□□□□ -0.92
NEK3-210ENST00000620675 HLA-DQA1P01909 254 aa9.29□□□□□ -0.92
NEK3-210ENST00000620675 SUMO2P61956 95 aaKnown RBP9.29□□□□□ -0.92
NEK3-210ENST00000620675 COLCA2A8K830 154 aa9.28□□□□□ -0.92
NEK3-210ENST00000620675 FABP9Q0Z7S8 132 aa9.28□□□□□ -0.92
NEK3-210ENST00000620675 SIVA1O15304 175 aa9.27□□□□□ -0.93
NEK3-210ENST00000620675 TSHBP01222 138 aa9.27□□□□□ -0.93
NEK3-210ENST00000620675 TRBV27A0A0K0K1C4 114 aa9.27□□□□□ -0.93
NEK3-210ENST00000620675 LOC389332A0A1B0GUA5 103 aa9.27□□□□□ -0.93
NEK3-210ENST00000620675 PPBPP02775 128 aa9.27□□□□□ -0.93
NEK3-210ENST00000620675 TRAPPC1Q9Y5R8 145 aa9.27□□□□□ -0.93
NEK3-210ENST00000620675 I3L3M4 83 aa9.26□□□□□ -0.93
NEK3-210ENST00000620675 IGHV3-30P01768 117 aa9.26□□□□□ -0.93
NEK3-210ENST00000620675 IGHV3-33P01772 117 aa9.26□□□□□ -0.93
NEK3-210ENST00000620675 IGHV3-30-3P0DP02 117 aa9.26□□□□□ -0.93
NEK3-210ENST00000620675 IGHV3-30-5P0DP03 117 aa9.26□□□□□ -0.93
NEK3-210ENST00000620675 PMCHP20382 165 aa9.26□□□□□ -0.93
NEK3-210ENST00000620675 MT-ND6P03923 174 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms