RNA–Protein interactions for RNA: ENST00000620502.4

BRCC3-209, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRCC3, Length 882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-209ENST00000620502 SPANXN1Q5VSR9 72 aa4.43□□□□□ -1.7
BRCC3-209ENST00000620502 LINC00336Q6ZUF6 198 aa4.43□□□□□ -1.7
BRCC3-209ENST00000620502 WFDC10BQ8IUB3 73 aa4.43□□□□□ -1.7
BRCC3-209ENST00000620502 FER1L6-AS1Q8NA97 138 aa4.43□□□□□ -1.7
BRCC3-209ENST00000620502 RNASE7Q9H1E1 156 aaKnown RBP4.43□□□□□ -1.7
BRCC3-209ENST00000620502 MSRB1Q9NZV6 116 aa4.43□□□□□ -1.7
BRCC3-209ENST00000620502 GAGE12JA6NER3 117 aa4.42□□□□□ -1.7
BRCC3-209ENST00000620502 F2Z2F3 143 aa4.42□□□□□ -1.7
BRCC3-209ENST00000620502 DNAH10OSP0CZ25 163 aa4.42□□□□□ -1.7
BRCC3-209ENST00000620502 CEBPGP53567 150 aa4.42□□□□□ -1.7
BRCC3-209ENST00000620502 RAB4BP61018 213 aa4.42□□□□□ -1.7
BRCC3-209ENST00000620502 GAGE1Q13065 139 aa4.42□□□□□ -1.7
BRCC3-209ENST00000620502 GAGE4Q13068 117 aa4.42□□□□□ -1.7
BRCC3-209ENST00000620502 GAGE5Q13069 117 aa4.42□□□□□ -1.7
BRCC3-209ENST00000620502 SUMO4Q6EEV6 95 aa4.42□□□□□ -1.7
BRCC3-209ENST00000620502 LYZL1Q6UWQ5 148 aa4.42□□□□□ -1.7
BRCC3-209ENST00000620502 FAM231DQ6ZW35 169 aa4.42□□□□□ -1.7
BRCC3-209ENST00000620502 LINC01551Q86U37 167 aa4.42□□□□□ -1.7
BRCC3-209ENST00000620502 C6orf223Q8N319 242 aa4.42□□□□□ -1.7
BRCC3-209ENST00000620502 ATP6V0E2Q8NHE4 81 aa4.42□□□□□ -1.7
BRCC3-209ENST00000620502 GTSF1LQ9H1H1 148 aa4.42□□□□□ -1.7
BRCC3-209ENST00000620502 RPP21Q9H633 154 aaKnown RBP4.42□□□□□ -1.7
BRCC3-209ENST00000620502 LY96Q9Y6Y9 160 aa4.42□□□□□ -1.7
BRCC3-209ENST00000620502 TRBV10-1A0A0K0K1A3 114 aa4.41□□□□□ -1.7
BRCC3-209ENST00000620502 XKRY2A2RUG3 117 aa4.41□□□□□ -1.7
BRCC3-209ENST00000620502 ZNF727A8MUV8 499 aa4.41□□□□□ -1.7
BRCC3-209ENST00000620502 NPSP0C0P6 89 aa4.41□□□□□ -1.7
BRCC3-209ENST00000620502 BTF3P20290 206 aaKnown RBP4.41□□□□□ -1.7
BRCC3-209ENST00000620502 NTF3P20783 257 aa4.41□□□□□ -1.7
BRCC3-209ENST00000620502 CTRLP40313 264 aa4.41□□□□□ -1.7
BRCC3-209ENST00000620502 CACNG7P62955 275 aa4.41□□□□□ -1.7
BRCC3-209ENST00000620502 TTC32Q5I0X7 151 aa4.41□□□□□ -1.7
BRCC3-209ENST00000620502 SOHLH1Q5JUK2 328 aa4.41□□□□□ -1.7
BRCC3-209ENST00000620502 LELP1Q5T871 98 aa4.41□□□□□ -1.7
BRCC3-209ENST00000620502 WDR73Q6P4I2 378 aa4.41□□□□□ -1.7
BRCC3-209ENST00000620502 GTSF1Q8WW33 167 aa4.41□□□□□ -1.7
BRCC3-209ENST00000620502 SMIM7Q9BQ49 75 aa4.41□□□□□ -1.7
BRCC3-209ENST00000620502 TPPP3Q9BW30 176 aa4.41□□□□□ -1.7
BRCC3-209ENST00000620502 CNFNQ9BYD5 112 aa4.41□□□□□ -1.7
BRCC3-209ENST00000620502 TNFRSF18Q9Y5U5 241 aa4.41□□□□□ -1.7
BRCC3-209ENST00000620502 DNAH10Q8IVF4 4471 aa4.4□□□□□ -1.7
BRCC3-209ENST00000620502 BIRC6Q9NR09 4857 aa4.4□□□□□ -1.7
BRCC3-209ENST00000620502 TRBV7-3A0A075B6L6 115 aa4.4□□□□□ -1.71
BRCC3-209ENST00000620502 IGHV3-38A0A0C4DH36 116 aa4.4□□□□□ -1.71
BRCC3-209ENST00000620502 GATCO43716 136 aaKnown RBP4.4□□□□□ -1.71
BRCC3-209ENST00000620502 EVI2AP22794 236 aa4.4□□□□□ -1.71
BRCC3-209ENST00000620502 FOXA3P55318 350 aaPredicted RBP4.4□□□□□ -1.71
BRCC3-209ENST00000620502 ERVFC1-1P60608 527 aa4.4□□□□□ -1.71
BRCC3-209ENST00000620502 UBE2D3P61077 147 aa4.4□□□□□ -1.71
BRCC3-209ENST00000620502 UBE2D2P62837 147 aa4.4□□□□□ -1.71
BRCC3-209ENST00000620502 IFITM2Q01629 132 aa4.4□□□□□ -1.71
BRCC3-209ENST00000620502 PEA15Q15121 130 aa4.4□□□□□ -1.71
BRCC3-209ENST00000620502 ZNF56Q15929 161 aa4.4□□□□□ -1.71
BRCC3-209ENST00000620502 TMEM241Q24JQ0 296 aa4.4□□□□□ -1.71
BRCC3-209ENST00000620502 FAM74A3Q4VXF1 159 aa4.4□□□□□ -1.71
BRCC3-209ENST00000620502 Q6ZRN7 208 aaPredicted RBP4.4□□□□□ -1.71
BRCC3-209ENST00000620502 OR10G8Q8NGN5 311 aa4.4□□□□□ -1.71
BRCC3-209ENST00000620502 AP1S3Q96PC3 154 aa4.4□□□□□ -1.71
BRCC3-209ENST00000620502 SMDT1Q9H4I9 107 aa4.4□□□□□ -1.71
BRCC3-209ENST00000620502 FRAS1Q86XX4 4008 aa4.4□□□□□ -1.71
BRCC3-209ENST00000620502 DNAH2Q9P225 4427 aa4.4□□□□□ -1.71
BRCC3-209ENST00000620502 TRAV9-2A0A087WT02 112 aa4.39□□□□□ -1.71
BRCC3-209ENST00000620502 TRAV8-6A0A0B4J262 113 aa4.39□□□□□ -1.71
BRCC3-209ENST00000620502 K7EP13 123 aa4.39□□□□□ -1.71
BRCC3-209ENST00000620502 M0QY20 66 aa4.39□□□□□ -1.71
BRCC3-209ENST00000620502 SMIM17P0DL12 118 aa4.39□□□□□ -1.71
BRCC3-209ENST00000620502 RPL23P62829 140 aaKnown RBP4.39□□□□□ -1.71
BRCC3-209ENST00000620502 RPL36AP83881 106 aaKnown RBP4.39□□□□□ -1.71
BRCC3-209ENST00000620502 TWIST1Q15672 202 aa4.39□□□□□ -1.71
BRCC3-209ENST00000620502 LINC01556Q5JQF7 62 aa4.39□□□□□ -1.71
BRCC3-209ENST00000620502 OR10J3Q5JRS4 329 aa4.39□□□□□ -1.71
BRCC3-209ENST00000620502 NEXN-AS1Q8NBZ9 246 aa4.39□□□□□ -1.71
BRCC3-209ENST00000620502 RPL36ALQ969Q0 106 aaKnown RBP4.39□□□□□ -1.71
BRCC3-209ENST00000620502 ISOC2Q96AB3 205 aa4.39□□□□□ -1.71
BRCC3-209ENST00000620502 OSTCQ9NRP0 149 aa4.39□□□□□ -1.71
BRCC3-209ENST00000620502 V9GYV3 84 aa4.39□□□□□ -1.71
BRCC3-209ENST00000620502 FAT2Q9NYQ8 4349 aa4.38□□□□□ -1.71
BRCC3-209ENST00000620502 A0A087WWC5 75 aa4.38□□□□□ -1.71
BRCC3-209ENST00000620502 A8MWL6 223 aa4.38□□□□□ -1.71
BRCC3-209ENST00000620502 IBA57-AS1B1ANH7 110 aa4.38□□□□□ -1.71
BRCC3-209ENST00000620502 MGPP08493 103 aa4.38□□□□□ -1.71
BRCC3-209ENST00000620502 TRGC1P0CF51 173 aa4.38□□□□□ -1.71
BRCC3-209ENST00000620502 TSKUQ8WUA8 353 aa4.38□□□□□ -1.71
BRCC3-209ENST00000620502 PGLYRP4Q96LB8 373 aa4.38□□□□□ -1.71
BRCC3-209ENST00000620502 GFRA4Q9GZZ7 299 aa4.38□□□□□ -1.71
BRCC3-209ENST00000620502 DPH3P1Q9H4G8 78 aa4.38□□□□□ -1.71
BRCC3-209ENST00000620502 NAT8Q9UHE5 227 aa4.38□□□□□ -1.71
BRCC3-209ENST00000620502 FAM231BA6NCW3 169 aa4.37□□□□□ -1.71
BRCC3-209ENST00000620502 IGHV3-30P01768 117 aa4.37□□□□□ -1.71
BRCC3-209ENST00000620502 IGHV3-33P01772 117 aa4.37□□□□□ -1.71
BRCC3-209ENST00000620502 IGHV3-30-3P0DP02 117 aa4.37□□□□□ -1.71
BRCC3-209ENST00000620502 IGHV3-30-5P0DP03 117 aa4.37□□□□□ -1.71
BRCC3-209ENST00000620502 RAB14P61106 215 aa4.37□□□□□ -1.71
BRCC3-209ENST00000620502 CLLU1Q5K131 121 aa4.37□□□□□ -1.71
BRCC3-209ENST00000620502 NTM-AS1Q6ZSK4 140 aa4.37□□□□□ -1.71
BRCC3-209ENST00000620502 NFE4Q86UQ8 179 aa4.37□□□□□ -1.71
BRCC3-209ENST00000620502 NIT1Q86X76 327 aa4.37□□□□□ -1.71
BRCC3-209ENST00000620502 C15orf54Q8N8G6 183 aa4.37□□□□□ -1.71
BRCC3-209ENST00000620502 DNAJC30Q96LL9 226 aa4.37□□□□□ -1.71
BRCC3-209ENST00000620502 DNAH17Q9UFH2 4485 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms