RNA–Protein interactions for RNA: ENST00000618934.1

PCDHGB3-202, Transcript of protocadherin gamma subfamily B, 3, humanhuman

APPRIS P1 BASIC

Gene PCDHGB3, Length 2,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-202ENST00000618934 TMEM238C9JI98 176 aa14.19□□□□□ -0.14
PCDHGB3-202ENST00000618934 J3QLI3 93 aa14.19□□□□□ -0.14
PCDHGB3-202ENST00000618934 FSHBP01225 129 aa14.19□□□□□ -0.14
PCDHGB3-202ENST00000618934 DUX3Q96PT4 197 aa14.19□□□□□ -0.14
PCDHGB3-202ENST00000618934 H3BMG7 143 aa14.18□□□□□ -0.14
PCDHGB3-202ENST00000618934 IGHV4-31P0DP07 118 aa14.18□□□□□ -0.14
PCDHGB3-202ENST00000618934 SCGB2A2Q13296 93 aa14.18□□□□□ -0.14
PCDHGB3-202ENST00000618934 SCGB1D4Q6XE38 83 aa14.18□□□□□ -0.14
PCDHGB3-202ENST00000618934 MTURNQ8N3F0 131 aa14.18□□□□□ -0.14
PCDHGB3-202ENST00000618934 NF1P21359 2839 aa14.18□□□□□ -0.14
PCDHGB3-202ENST00000618934 ELANEP08246 267 aa14.17□□□□□ -0.14
PCDHGB3-202ENST00000618934 WFDC2Q14508 124 aa14.17□□□□□ -0.14
PCDHGB3-202ENST00000618934 RRN3P1Q2M238 152 aa14.17□□□□□ -0.14
PCDHGB3-202ENST00000618934 SYT8Q8NBV8 401 aa14.17□□□□□ -0.14
PCDHGB3-202ENST00000618934 UBE2E2Q96LR5 201 aa14.17□□□□□ -0.14
PCDHGB3-202ENST00000618934 BBC3Q96PG8 261 aaPredicted RBP14.17□□□□□ -0.14
PCDHGB3-202ENST00000618934 TIMM17AQ99595 171 aa14.17□□□□□ -0.14
PCDHGB3-202ENST00000618934 TMEM141Q96I45 108 aa14.17□□□□□ -0.14
PCDHGB3-202ENST00000618934 CHD6Q8TD26 2715 aa14.17□□□□□ -0.14
PCDHGB3-202ENST00000618934 IGHV3-73A0A0B4J1V6 119 aa14.16□□□□□ -0.14
PCDHGB3-202ENST00000618934 PROK1P58294 105 aa14.16□□□□□ -0.14
PCDHGB3-202ENST00000618934 TMEM170BQ5T4T1 132 aa14.16□□□□□ -0.14
PCDHGB3-202ENST00000618934 EPG5Q9HCE0 2579 aa14.15□□□□□ -0.14
PCDHGB3-202ENST00000618934 DEFB131AP59861 70 aa14.15□□□□□ -0.14
PCDHGB3-202ENST00000618934 Q9UF83 564 aa14.15□□□□□ -0.14
PCDHGB3-202ENST00000618934 RBMY1BA6NDE4 496 aaKnown RBP14.14□□□□□ -0.15
PCDHGB3-202ENST00000618934 RBMY1EA6NEQ0 496 aaKnown RBP14.14□□□□□ -0.15
PCDHGB3-202ENST00000618934 RBMY1DP0C7P1 496 aaKnown RBP14.14□□□□□ -0.15
PCDHGB3-202ENST00000618934 SRSF9Q13242 221 aaKnown RBP eCLIP14.14□□□□□ -0.15
PCDHGB3-202ENST00000618934 NACAE9PAV3 2078 aa14.14□□□□□ -0.15
PCDHGB3-202ENST00000618934 SONP18583 2426 aaKnown RBP14.14□□□□□ -0.15
PCDHGB3-202ENST00000618934 A0A0J9YY99 117 aa14.14□□□□□ -0.15
PCDHGB3-202ENST00000618934 APCP25054 2843 aa14.13□□□□□ -0.15
PCDHGB3-202ENST00000618934 SFTA2Q6UW10 78 aa14.13□□□□□ -0.15
PCDHGB3-202ENST00000618934 TRPT1Q86TN4 253 aaKnown RBP14.13□□□□□ -0.15
PCDHGB3-202ENST00000618934 RNF152Q8N8N0 203 aa14.13□□□□□ -0.15
PCDHGB3-202ENST00000618934 AMELXQ99217 191 aa14.13□□□□□ -0.15
PCDHGB3-202ENST00000618934 PGPEP1Q9NXJ5 209 aa14.13□□□□□ -0.15
PCDHGB3-202ENST00000618934 NSUN5P1Q3KNT7 163 aa14.12□□□□□ -0.15
PCDHGB3-202ENST00000618934 SPANXB1Q9NS25 103 aaPredicted RBP14.12□□□□□ -0.15
PCDHGB3-202ENST00000618934 LINC01549A6NIU2 74 aa14.11□□□□□ -0.15
PCDHGB3-202ENST00000618934 PAPPA-AS1Q5QFB9 102 aa14.11□□□□□ -0.15
PCDHGB3-202ENST00000618934 SH2D6Q7Z4S9 175 aa14.11□□□□□ -0.15
PCDHGB3-202ENST00000618934 UBE2D1P51668 147 aa14.11□□□□□ -0.15
PCDHGB3-202ENST00000618934 HERVK_113P61574 105 aa14.11□□□□□ -0.15
PCDHGB3-202ENST00000618934 C20orf203Q8NBC4 194 aa14.11□□□□□ -0.15
PCDHGB3-202ENST00000618934 PRRC2AP48634 2157 aaKnown RBP14.1□□□□□ -0.15
PCDHGB3-202ENST00000618934 WNK1Q9H4A3 2382 aa14.1□□□□□ -0.15
PCDHGB3-202ENST00000618934 NIPBLQ6KC79 2804 aaeCLIP14.1□□□□□ -0.15
PCDHGB3-202ENST00000618934 H3BMM0 161 aa14.1□□□□□ -0.15
PCDHGB3-202ENST00000618934 RHOHQ15669 191 aa14.1□□□□□ -0.15
PCDHGB3-202ENST00000618934 TMEM61Q8N0U2 210 aa14.1□□□□□ -0.15
PCDHGB3-202ENST00000618934 TRGV11A0A075B6L2 103 aa14.09□□□□□ -0.15
PCDHGB3-202ENST00000618934 IGHV3-64A0A075B6Q5 118 aa14.09□□□□□ -0.15
PCDHGB3-202ENST00000618934 F8W1H4 67 aa14.09□□□□□ -0.15
PCDHGB3-202ENST00000618934 I3L3M4 83 aa14.09□□□□□ -0.15
PCDHGB3-202ENST00000618934 APOMO95445 188 aa14.09□□□□□ -0.15
PCDHGB3-202ENST00000618934 Q6ZSN1 163 aa14.09□□□□□ -0.15
PCDHGB3-202ENST00000618934 FAM104AQ969W3 186 aa14.09□□□□□ -0.15
PCDHGB3-202ENST00000618934 PRO0461Q9UI25 63 aa14.09□□□□□ -0.15
PCDHGB3-202ENST00000618934 MRPL16Q9NX20 251 aaKnown RBP14.09□□□□□ -0.15
PCDHGB3-202ENST00000618934 NFE4Q86UQ8 179 aa14.08□□□□□ -0.16
PCDHGB3-202ENST00000618934 IGLV4-3A0A075B6K6 122 aa14.07□□□□□ -0.16
PCDHGB3-202ENST00000618934 A0A0J9YXV3 536 aa14.07□□□□□ -0.16
PCDHGB3-202ENST00000618934 J3QQQ9 107 aa14.07□□□□□ -0.16
PCDHGB3-202ENST00000618934 ETDBQ3ZM63 59 aa14.07□□□□□ -0.16
PCDHGB3-202ENST00000618934 CEMP1Q6PRD7 247 aaPredicted RBP14.07□□□□□ -0.16
PCDHGB3-202ENST00000618934 TSPAN13O95857 204 aa14.07□□□□□ -0.16
PCDHGB3-202ENST00000618934 GTSF1LQ9H1H1 148 aa14.07□□□□□ -0.16
PCDHGB3-202ENST00000618934 IGHV3-30P01768 117 aa14.06□□□□□ -0.16
PCDHGB3-202ENST00000618934 IGHV3-30-5P0DP03 117 aa14.06□□□□□ -0.16
PCDHGB3-202ENST00000618934 Q5PR19 223 aa14.06□□□□□ -0.16
PCDHGB3-202ENST00000618934 DLX4Q92988 240 aaPredicted RBP14.06□□□□□ -0.16
PCDHGB3-202ENST00000618934 SPAG8Q99932 426 aaPredicted RBP14.06□□□□□ -0.16
PCDHGB3-202ENST00000618934 TSSC4Q9Y5U2 329 aaPredicted RBP14.06□□□□□ -0.16
PCDHGB3-202ENST00000618934 ITPR3Q14573 2671 aa14.06□□□□□ -0.16
PCDHGB3-202ENST00000618934 KHDC1LQ5JSQ8 128 aa14.06□□□□□ -0.16
PCDHGB3-202ENST00000618934 SLC25A29Q8N8R3 303 aa14.06□□□□□ -0.16
PCDHGB3-202ENST00000618934 TMEM223A0PJW6 202 aa14.05□□□□□ -0.16
PCDHGB3-202ENST00000618934 ZNF22P17026 224 aaPredicted RBP14.05□□□□□ -0.16
PCDHGB3-202ENST00000618934 GAGE13Q4V321 117 aa14.05□□□□□ -0.16
PCDHGB3-202ENST00000618934 AZU1P20160 251 aa14.05□□□□□ -0.16
PCDHGB3-202ENST00000618934 RNASE13Q5GAN3 156 aaKnown RBP14.05□□□□□ -0.16
PCDHGB3-202ENST00000618934 A8MTW9 85 aa14.04□□□□□ -0.16
PCDHGB3-202ENST00000618934 CFC1BP0CG36 223 aa14.04□□□□□ -0.16
PCDHGB3-202ENST00000618934 CFC1P0CG37 223 aa14.04□□□□□ -0.16
PCDHGB3-202ENST00000618934 NDUFA11Q86Y39 141 aa14.04□□□□□ -0.16
PCDHGB3-202ENST00000618934 SETD2Q9BYW2 2564 aaPredicted RBP14.04□□□□□ -0.16
PCDHGB3-202ENST00000618934 TMEM238LA0A1B0GVL6 79 aa14.04□□□□□ -0.16
PCDHGB3-202ENST00000618934 A6NJY4 79 aa14.04□□□□□ -0.16
PCDHGB3-202ENST00000618934 Q8N2B8 174 aa14.04□□□□□ -0.16
PCDHGB3-202ENST00000618934 Q96MF0 132 aa14.04□□□□□ -0.16
PCDHGB3-202ENST00000618934 INSL3P51460 131 aa14.03□□□□□ -0.16
PCDHGB3-202ENST00000618934 RHODO00212 210 aa14.03□□□□□ -0.16
PCDHGB3-202ENST00000618934 LGALS3P17931 250 aaKnown RBP14.03□□□□□ -0.16
PCDHGB3-202ENST00000618934 DEFB113Q30KQ7 82 aa14.03□□□□□ -0.16
PCDHGB3-202ENST00000618934 VCX2Q9H322 139 aa14.03□□□□□ -0.16
PCDHGB3-202ENST00000618934 MAP6D1Q9H9H5 199 aa14.03□□□□□ -0.16
PCDHGB3-202ENST00000618934 LOC107984156A0A0G2JMH3 177 aa14.02□□□□□ -0.16
PCDHGB3-202ENST00000618934 GAGE12HA6NDE8 117 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 212.2 ms