RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 COX7BP24311 80 aa11.69□□□□□ -0.54
COL5A1-208ENST00000618395 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.69□□□□□ -0.54
COL5A1-208ENST00000618395 SOSTDC1Q6X4U4 206 aa11.69□□□□□ -0.54
COL5A1-208ENST00000618395 WFDC10BQ8IUB3 73 aa11.69□□□□□ -0.54
COL5A1-208ENST00000618395 LINC01619G3V211 115 aa11.69□□□□□ -0.54
COL5A1-208ENST00000618395 ZNF491Q8N8L2 437 aa11.69□□□□□ -0.54
COL5A1-208ENST00000618395 TRBV7-3A0A075B6L6 115 aa11.68□□□□□ -0.54
COL5A1-208ENST00000618395 IGHV4-59P01825 116 aa11.68□□□□□ -0.54
COL5A1-208ENST00000618395 TIRAPP58753 221 aa11.68□□□□□ -0.54
COL5A1-208ENST00000618395 IGKV2D-24A0A075B6R9 120 aa11.68□□□□□ -0.54
COL5A1-208ENST00000618395 SCXQ7RTU7 201 aa11.68□□□□□ -0.54
COL5A1-208ENST00000618395 PRORYQ9H606 182 aa11.68□□□□□ -0.54
COL5A1-208ENST00000618395 APOC4P55056 127 aa11.68□□□□□ -0.54
COL5A1-208ENST00000618395 NFE4Q86UQ8 179 aa11.68□□□□□ -0.54
COL5A1-208ENST00000618395 ZFAND3Q9H8U3 227 aa11.68□□□□□ -0.54
COL5A1-208ENST00000618395 A0A0J9YXY3 114 aa11.68□□□□□ -0.54
COL5A1-208ENST00000618395 DEFB112Q30KQ8 113 aa11.67□□□□□ -0.54
COL5A1-208ENST00000618395 LOC107984640A0A0U1RRK4 108 aa11.67□□□□□ -0.54
COL5A1-208ENST00000618395 DOPEY1Q5JWR5 2465 aa11.67□□□□□ -0.54
COL5A1-208ENST00000618395 NOP10Q9NPE3 64 aaKnown RBP11.67□□□□□ -0.54
COL5A1-208ENST00000618395 MDFICQ9P1T7 246 aa11.67□□□□□ -0.54
COL5A1-208ENST00000618395 SPAG11BQ08648 103 aa11.67□□□□□ -0.54
COL5A1-208ENST00000618395 ARTNQ5T4W7 220 aa11.67□□□□□ -0.54
COL5A1-208ENST00000618395 ZNRD1Q9P1U0 126 aa11.67□□□□□ -0.54
COL5A1-208ENST00000618395 K7EQD1 137 aa11.67□□□□□ -0.54
COL5A1-208ENST00000618395 CSRP2Q16527 193 aa11.67□□□□□ -0.54
COL5A1-208ENST00000618395 C1orf147Q96MC9 270 aaPredicted RBP11.66□□□□□ -0.54
COL5A1-208ENST00000618395 A0A096LPF7 62 aa11.66□□□□□ -0.54
COL5A1-208ENST00000618395 IGHV7-4-1A0A0J9YVY3 117 aa11.66□□□□□ -0.54
COL5A1-208ENST00000618395 LRP4O75096 1905 aa11.66□□□□□ -0.54
COL5A1-208ENST00000618395 DEFB121Q5J5C9 76 aa11.65□□□□□ -0.54
COL5A1-208ENST00000618395 YPEL4Q96NS1 127 aa11.65□□□□□ -0.54
COL5A1-208ENST00000618395 SPRY4Q9C004 299 aa11.65□□□□□ -0.54
COL5A1-208ENST00000618395 MSRB1Q9NZV6 116 aa11.65□□□□□ -0.54
COL5A1-208ENST00000618395 DKK4Q9UBT3 224 aa11.65□□□□□ -0.54
COL5A1-208ENST00000618395 IGHV3-33P01772 117 aa11.65□□□□□ -0.54
COL5A1-208ENST00000618395 Q6ZQT7 251 aa11.65□□□□□ -0.54
COL5A1-208ENST00000618395 NDUFA1O15239 70 aa11.65□□□□□ -0.54
COL5A1-208ENST00000618395 PSPHP1O15172 72 aa11.65□□□□□ -0.54
COL5A1-208ENST00000618395 RNF114Q9Y508 228 aa11.65□□□□□ -0.54
COL5A1-208ENST00000618395 Q8N9L7 120 aa11.64□□□□□ -0.55
COL5A1-208ENST00000618395 GP9P14770 177 aa11.64□□□□□ -0.55
COL5A1-208ENST00000618395 PLA2G2EQ9NZK7 142 aa11.64□□□□□ -0.55
COL5A1-208ENST00000618395 E9PLN8 166 aa11.63□□□□□ -0.55
COL5A1-208ENST00000618395 NANOS2P60321 138 aaKnown RBP11.63□□□□□ -0.55
COL5A1-208ENST00000618395 C17orf58Q2M2W7 97 aa11.63□□□□□ -0.55
COL5A1-208ENST00000618395 IGLV10-54A0A075B6I4 117 aa11.63□□□□□ -0.55
COL5A1-208ENST00000618395 PRR4Q16378 134 aa11.63□□□□□ -0.55
COL5A1-208ENST00000618395 BRD3OSQ6XYD6 125 aa11.63□□□□□ -0.55
COL5A1-208ENST00000618395 IGKV1OR2-108A0A075B7D4 117 aa11.63□□□□□ -0.55
COL5A1-208ENST00000618395 PPDPFQ9H3Y8 114 aa11.63□□□□□ -0.55
COL5A1-208ENST00000618395 LRCOL1A6NCL2 159 aa11.62□□□□□ -0.55
COL5A1-208ENST00000618395 LYPD2Q6UXB3 125 aa11.62□□□□□ -0.55
COL5A1-208ENST00000618395 C4orf48Q5BLP8 95 aa11.62□□□□□ -0.55
COL5A1-208ENST00000618395 ABCA2Q9BZC7 2435 aa11.62□□□□□ -0.55
COL5A1-208ENST00000618395 LINC00311Q8N616 119 aa11.62□□□□□ -0.55
COL5A1-208ENST00000618395 INSL3P51460 131 aa11.62□□□□□ -0.55
COL5A1-208ENST00000618395 FOXL2NBQ6ZUU3 175 aa11.62□□□□□ -0.55
COL5A1-208ENST00000618395 WFDC10AQ9H1F0 79 aa11.62□□□□□ -0.55
COL5A1-208ENST00000618395 IGLV3-9A0A075B6K5 115 aa11.61□□□□□ -0.55
COL5A1-208ENST00000618395 Q6JHZ5 121 aa11.61□□□□□ -0.55
COL5A1-208ENST00000618395 C2orf91Q6ZV80 131 aa11.61□□□□□ -0.55
COL5A1-208ENST00000618395 BDP1A6H8Y1 2624 aa11.61□□□□□ -0.55
COL5A1-208ENST00000618395 LOXP28300 417 aaPredicted RBP11.61□□□□□ -0.55
COL5A1-208ENST00000618395 A0A1B0GXF2 115 aa11.61□□□□□ -0.55
COL5A1-208ENST00000618395 EBI3Q14213 229 aa11.61□□□□□ -0.55
COL5A1-208ENST00000618395 COL4A1P02462 1669 aa11.61□□□□□ -0.55
COL5A1-208ENST00000618395 B4DSR2 109 aa11.61□□□□□ -0.55
COL5A1-208ENST00000618395 C15orf65H3BRN8 121 aa11.61□□□□□ -0.55
COL5A1-208ENST00000618395 TPSG1Q9NRR2 321 aa11.6□□□□□ -0.55
COL5A1-208ENST00000618395 MED14OSP0DP75 135 aa11.6□□□□□ -0.55
COL5A1-208ENST00000618395 K7ENP7 123 aa11.6□□□□□ -0.55
COL5A1-208ENST00000618395 G3V318 75 aa11.6□□□□□ -0.55
COL5A1-208ENST00000618395 A0A0J9YWU9 116 aa11.6□□□□□ -0.55
COL5A1-208ENST00000618395 GATA3P23771 443 aa11.6□□□□□ -0.55
COL5A1-208ENST00000618395 A0A0J9YY99 117 aa11.59□□□□□ -0.55
COL5A1-208ENST00000618395 FAM167A-AS1Q96KT0 104 aa11.59□□□□□ -0.55
COL5A1-208ENST00000618395 TTC28Q96AY4 2481 aa11.59□□□□□ -0.55
COL5A1-208ENST00000618395 FAM222AQ5U5X8 452 aa11.59□□□□□ -0.55
COL5A1-208ENST00000618395 FLVCR1-AS1Q8TAF5 88 aa11.59□□□□□ -0.55
COL5A1-208ENST00000618395 TP73-AS1Q9UF72 201 aa11.59□□□□□ -0.55
COL5A1-208ENST00000618395 LST1O00453 97 aa11.58□□□□□ -0.55
COL5A1-208ENST00000618395 PRYO14603 147 aa11.58□□□□□ -0.55
COL5A1-208ENST00000618395 SP5Q6BEB4 398 aaPredicted RBP11.58□□□□□ -0.56
COL5A1-208ENST00000618395 TMEM263Q8WUH6 116 aaKnown RBP11.58□□□□□ -0.56
COL5A1-208ENST00000618395 ADAMTS20P59510 1910 aa11.58□□□□□ -0.56
COL5A1-208ENST00000618395 FRMD6-AS1P0C7T7 363 aa11.58□□□□□ -0.56
COL5A1-208ENST00000618395 Q8TCH9 128 aa11.58□□□□□ -0.56
COL5A1-208ENST00000618395 FHL1Q13642 323 aa11.58□□□□□ -0.56
COL5A1-208ENST00000618395 H7C423 109 aa11.58□□□□□ -0.56
COL5A1-208ENST00000618395 J3QLI3 93 aa11.58□□□□□ -0.56
COL5A1-208ENST00000618395 CCKP06307 115 aa11.58□□□□□ -0.56
COL5A1-208ENST00000618395 GYPEP15421 78 aa11.58□□□□□ -0.56
COL5A1-208ENST00000618395 GATA4P43694 442 aa11.58□□□□□ -0.56
COL5A1-208ENST00000618395 IGHV4-30-2A0A087WSY4 118 aa11.57□□□□□ -0.56
COL5A1-208ENST00000618395 NRACQ8N912 160 aa11.57□□□□□ -0.56
COL5A1-208ENST00000618395 A8MZ25 164 aa11.57□□□□□ -0.56
COL5A1-208ENST00000618395 TRBV6-1A0A0K0K1D8 114 aa11.57□□□□□ -0.56
COL5A1-208ENST00000618395 OXLD1Q5BKU9 147 aa11.57□□□□□ -0.56
COL5A1-208ENST00000618395 SLPIP03973 132 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 124.7 ms