RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 PDZD2O15018 2839 aa10.36□□□□□ -0.75
PCDHGA3-202ENST00000612467 TRAV12-1A0A0B4J245 112 aa10.36□□□□□ -0.75
PCDHGA3-202ENST00000612467 GAGE10A6NGK3 116 aa10.36□□□□□ -0.75
PCDHGA3-202ENST00000612467 C11orf86A6NJI1 115 aa10.36□□□□□ -0.75
PCDHGA3-202ENST00000612467 C2CD3Q4AC94 2353 aa10.36□□□□□ -0.75
PCDHGA3-202ENST00000612467 K7ERU9 68 aa10.35□□□□□ -0.75
PCDHGA3-202ENST00000612467 M0QY20 66 aa10.35□□□□□ -0.75
PCDHGA3-202ENST00000612467 CYSLTR1Q9Y271 337 aa10.35□□□□□ -0.75
PCDHGA3-202ENST00000612467 FOXI2Q6ZQN5 318 aa10.35□□□□□ -0.75
PCDHGA3-202ENST00000612467 PLEKHB2Q96CS7 222 aa10.35□□□□□ -0.75
PCDHGA3-202ENST00000612467 PRADC1Q9BSG0 188 aa10.35□□□□□ -0.75
PCDHGA3-202ENST00000612467 IGLV4-69A0A075B6H9 119 aa10.34□□□□□ -0.75
PCDHGA3-202ENST00000612467 IGIPA6NJ69 53 aa10.34□□□□□ -0.75
PCDHGA3-202ENST00000612467 OR11H12B2RN74 326 aa10.34□□□□□ -0.75
PCDHGA3-202ENST00000612467 LINC01619G3V211 115 aa10.34□□□□□ -0.75
PCDHGA3-202ENST00000612467 CEND1Q8N111 149 aa10.34□□□□□ -0.75
PCDHGA3-202ENST00000612467 OR11H2Q8NH07 326 aa10.34□□□□□ -0.75
PCDHGA3-202ENST00000612467 ANK3Q12955 4377 aaKnown RBP10.34□□□□□ -0.75
PCDHGA3-202ENST00000612467 RNF152Q8N8N0 203 aa10.34□□□□□ -0.75
PCDHGA3-202ENST00000612467 KIR2DL4Q99706 377 aa10.34□□□□□ -0.75
PCDHGA3-202ENST00000612467 HIGD1BQ9P298 99 aa10.34□□□□□ -0.75
PCDHGA3-202ENST00000612467 VCYO14598 125 aa10.33□□□□□ -0.76
PCDHGA3-202ENST00000612467 SAMD13Q5VXD3 122 aa10.33□□□□□ -0.76
PCDHGA3-202ENST00000612467 Q6ZSV7 163 aa10.33□□□□□ -0.76
PCDHGA3-202ENST00000612467 HIST1H4GQ99525 98 aa10.33□□□□□ -0.76
PCDHGA3-202ENST00000612467 H3BMM0 161 aa10.33□□□□□ -0.76
PCDHGA3-202ENST00000612467 SMIM13P0DJ93 91 aa10.33□□□□□ -0.76
PCDHGA3-202ENST00000612467 ODF3Q96PU9 254 aa10.33□□□□□ -0.76
PCDHGA3-202ENST00000612467 ESM1Q9NQ30 184 aa10.33□□□□□ -0.76
PCDHGA3-202ENST00000612467 UFSP1Q6NVU6 142 aa10.32□□□□□ -0.76
PCDHGA3-202ENST00000612467 ZNRF2Q8NHG8 242 aa10.32□□□□□ -0.76
PCDHGA3-202ENST00000612467 A0A1W2PPM0 123 aa10.32□□□□□ -0.76
PCDHGA3-202ENST00000612467 Q6ZSN1 163 aa10.32□□□□□ -0.76
PCDHGA3-202ENST00000612467 SYT8Q8NBV8 401 aa10.32□□□□□ -0.76
PCDHGA3-202ENST00000612467 PHLDA1Q8WV24 401 aaPredicted RBP10.32□□□□□ -0.76
PCDHGA3-202ENST00000612467 FASNP49327 2511 aaKnown RBP10.32□□□□□ -0.76
PCDHGA3-202ENST00000612467 IGHV3-64A0A075B6Q5 118 aa10.31□□□□□ -0.76
PCDHGA3-202ENST00000612467 MYMXA0A1B0GTQ4 84 aa10.31□□□□□ -0.76
PCDHGA3-202ENST00000612467 CIDEAO60543 219 aa10.31□□□□□ -0.76
PCDHGA3-202ENST00000612467 TSPEAR-AS2P59090 65 aa10.31□□□□□ -0.76
PCDHGA3-202ENST00000612467 RNASE13Q5GAN3 156 aaKnown RBP10.31□□□□□ -0.76
PCDHGA3-202ENST00000612467 CEMP1Q6PRD7 247 aaPredicted RBP10.31□□□□□ -0.76
PCDHGA3-202ENST00000612467 MAP6D1Q9H9H5 199 aa10.31□□□□□ -0.76
PCDHGA3-202ENST00000612467 SPCS1Q9Y6A9 102 aa10.31□□□□□ -0.76
PCDHGA3-202ENST00000612467 TRBV27A0A0K0K1C4 114 aa10.31□□□□□ -0.76
PCDHGA3-202ENST00000612467 PPP1R17O96001 155 aa10.31□□□□□ -0.76
PCDHGA3-202ENST00000612467 SAMD5Q5TGI4 173 aa10.31□□□□□ -0.76
PCDHGA3-202ENST00000612467 DYNLRB2Q8TF09 96 aa10.31□□□□□ -0.76
PCDHGA3-202ENST00000612467 CLUHP3Q96NS8 147 aa10.31□□□□□ -0.76
PCDHGA3-202ENST00000612467 NOTCH2Q04721 2471 aa10.31□□□□□ -0.76
PCDHGA3-202ENST00000612467 DNAJC9-AS1A6NH13 148 aa10.3□□□□□ -0.76
PCDHGA3-202ENST00000612467 ZNF815PA8K554 130 aa10.3□□□□□ -0.76
PCDHGA3-202ENST00000612467 G3V4G9 280 aa10.3□□□□□ -0.76
PCDHGA3-202ENST00000612467 IGHV3OR16-12A0A075B7B8 117 aa10.3□□□□□ -0.76
PCDHGA3-202ENST00000612467 K7EP34 96 aa10.3□□□□□ -0.76
PCDHGA3-202ENST00000612467 TMEM170BQ5T4T1 132 aa10.3□□□□□ -0.76
PCDHGA3-202ENST00000612467 Q8N2B8 174 aa10.3□□□□□ -0.76
PCDHGA3-202ENST00000612467 SPAG8Q99932 426 aaPredicted RBP10.3□□□□□ -0.76
PCDHGA3-202ENST00000612467 C4orf3Q8WVX3 66 aa10.29□□□□□ -0.76
PCDHGA3-202ENST00000612467 TM2D2Q9BX73 214 aa10.29□□□□□ -0.76
PCDHGA3-202ENST00000612467 TRBV7-3A0A075B6L6 115 aa10.29□□□□□ -0.76
PCDHGA3-202ENST00000612467 E9PLD3 99 aa10.29□□□□□ -0.76
PCDHGA3-202ENST00000612467 PMVKQ15126 192 aa10.29□□□□□ -0.76
PCDHGA3-202ENST00000612467 SFTA2Q6UW10 78 aa10.29□□□□□ -0.76
PCDHGA3-202ENST00000612467 MTURNQ8N3F0 131 aa10.29□□□□□ -0.76
PCDHGA3-202ENST00000612467 RAX2Q96IS3 184 aa10.29□□□□□ -0.76
PCDHGA3-202ENST00000612467 HECTD1Q9ULT8 2610 aa10.29□□□□□ -0.76
PCDHGA3-202ENST00000612467 CD28P10747 220 aa10.28□□□□□ -0.76
PCDHGA3-202ENST00000612467 MRPL16Q9NX20 251 aaKnown RBP10.28□□□□□ -0.76
PCDHGA3-202ENST00000612467 XCL2Q9UBD3 114 aa10.28□□□□□ -0.76
PCDHGA3-202ENST00000612467 UNC79Q9P2D8 2635 aa10.28□□□□□ -0.76
PCDHGA3-202ENST00000612467 SCGB2A2Q13296 93 aa10.28□□□□□ -0.76
PCDHGA3-202ENST00000612467 DEFB114Q30KQ6 69 aa10.28□□□□□ -0.76
PCDHGA3-202ENST00000612467 SCGB1D4Q6XE38 83 aa10.28□□□□□ -0.76
PCDHGA3-202ENST00000612467 IGHV3-38A0A0C4DH36 116 aa10.27□□□□□ -0.76
PCDHGA3-202ENST00000612467 TRBV6-5A0A0K0K1A5 114 aa10.27□□□□□ -0.76
PCDHGA3-202ENST00000612467 C12orf74Q32Q52 190 aa10.27□□□□□ -0.76
PCDHGA3-202ENST00000612467 LRRC75A-AS1Q8N1F1 130 aa10.27□□□□□ -0.76
PCDHGA3-202ENST00000612467 TRGV11A0A075B6L2 103 aa10.27□□□□□ -0.77
PCDHGA3-202ENST00000612467 AZU1P20160 251 aa10.27□□□□□ -0.77
PCDHGA3-202ENST00000612467 TRPT1Q86TN4 253 aaKnown RBP10.27□□□□□ -0.77
PCDHGA3-202ENST00000612467 LINC01587Q99440 93 aa10.27□□□□□ -0.77
PCDHGA3-202ENST00000612467 PEMTQ9UBM1 199 aa10.27□□□□□ -0.77
PCDHGA3-202ENST00000612467 FABP2P12104 132 aa10.26□□□□□ -0.77
PCDHGA3-202ENST00000612467 RPL32P62910 135 aaKnown RBP10.26□□□□□ -0.77
PCDHGA3-202ENST00000612467 GTF2H5Q6ZYL4 71 aa10.26□□□□□ -0.77
PCDHGA3-202ENST00000612467 ODF3L2Q3SX64 289 aa10.26□□□□□ -0.77
PCDHGA3-202ENST00000612467 KMT2BQ9UMN6 2715 aaPredicted RBP10.25□□□□□ -0.77
PCDHGA3-202ENST00000612467 IGLL5B9A064 214 aa10.25□□□□□ -0.77
PCDHGA3-202ENST00000612467 CITED2Q99967 270 aaPredicted RBP10.25□□□□□ -0.77
PCDHGA3-202ENST00000612467 WFDC10AQ9H1F0 79 aa10.25□□□□□ -0.77
PCDHGA3-202ENST00000612467 A0A0J9YXV3 536 aa10.25□□□□□ -0.77
PCDHGA3-202ENST00000612467 C20orf203Q8NBC4 194 aa10.25□□□□□ -0.77
PCDHGA3-202ENST00000612467 TIMM17AQ99595 171 aa10.25□□□□□ -0.77
PCDHGA3-202ENST00000612467 I3L3M4 83 aa10.24□□□□□ -0.77
PCDHGA3-202ENST00000612467 GTSF1LQ9H1H1 148 aa10.24□□□□□ -0.77
PCDHGA3-202ENST00000612467 FAM104AQ969W3 186 aa10.23□□□□□ -0.77
PCDHGA3-202ENST00000612467 TMEM141Q96I45 108 aa10.23□□□□□ -0.77
PCDHGA3-202ENST00000612467 SRSF9Q13242 221 aaKnown RBP eCLIP10.23□□□□□ -0.77
PCDHGA3-202ENST00000612467 NSUN5P1Q3KNT7 163 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 118 ms