RNA–Protein interactions for RNA: ENST00000609104.5

USP6NL-205, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP6NL, Length 11,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-205ENST00000609104 FAM167A-AS1Q96KT0 104 aa10.08□□□□□ -0.8
USP6NL-205ENST00000609104 ATP5G1P05496 136 aa10.08□□□□□ -0.8
USP6NL-205ENST00000609104 HIGD1BQ9P298 99 aa10.08□□□□□ -0.8
USP6NL-205ENST00000609104 IGHV4-61A0A0C4DH41 118 aa10.08□□□□□ -0.8
USP6NL-205ENST00000609104 DEFB1P60022 68 aa10.08□□□□□ -0.8
USP6NL-205ENST00000609104 TRBV12-3P01733 135 aa10.08□□□□□ -0.8
USP6NL-205ENST00000609104 C2orf70A6NJV1 201 aa10.08□□□□□ -0.8
USP6NL-205ENST00000609104 IGKV1-17P01599 117 aa10.07□□□□□ -0.8
USP6NL-205ENST00000609104 Q8N9W7 124 aa10.07□□□□□ -0.8
USP6NL-205ENST00000609104 WFDC11Q8NEX6 87 aa10.07□□□□□ -0.8
USP6NL-205ENST00000609104 Q8NFD4 153 aa10.07□□□□□ -0.8
USP6NL-205ENST00000609104 C11orf86A6NJI1 115 aa10.07□□□□□ -0.8
USP6NL-205ENST00000609104 DEFB113Q30KQ7 82 aa10.07□□□□□ -0.8
USP6NL-205ENST00000609104 MPLKIPQ8TAP9 179 aa10.07□□□□□ -0.8
USP6NL-205ENST00000609104 KLK12Q9UKR0 248 aa10.07□□□□□ -0.8
USP6NL-205ENST00000609104 ODF1Q14990 250 aa10.07□□□□□ -0.8
USP6NL-205ENST00000609104 PTH2Q96A98 100 aa10.06□□□□□ -0.8
USP6NL-205ENST00000609104 IGKV4-1P06312 121 aa10.06□□□□□ -0.8
USP6NL-205ENST00000609104 SPAG11BQ08648 103 aa10.06□□□□□ -0.8
USP6NL-205ENST00000609104 MDFICQ9P1T7 246 aa10.06□□□□□ -0.8
USP6NL-205ENST00000609104 SORL1Q92673 2214 aa10.06□□□□□ -0.8
USP6NL-205ENST00000609104 ATG2AQ2TAZ0 1938 aa10.06□□□□□ -0.8
USP6NL-205ENST00000609104 IGHV1-58A0A0C4DH39 117 aa10.06□□□□□ -0.8
USP6NL-205ENST00000609104 SPTSSBQ8NFR3 76 aa10.06□□□□□ -0.8
USP6NL-205ENST00000609104 FAM110AQ9BQ89 295 aa10.05□□□□□ -0.8
USP6NL-205ENST00000609104 E7EUB6 86 aa10.05□□□□□ -0.8
USP6NL-205ENST00000609104 TEX22C9J3V5 150 aa10.05□□□□□ -0.8
USP6NL-205ENST00000609104 UPK3BQ9BT76 320 aa10.04□□□□□ -0.8
USP6NL-205ENST00000609104 NFE4Q86UQ8 179 aa10.04□□□□□ -0.8
USP6NL-205ENST00000609104 FANCD2OSQ96PS1 177 aa10.04□□□□□ -0.8
USP6NL-205ENST00000609104 FRMD6-AS1P0C7T7 363 aa10.03□□□□□ -0.8
USP6NL-205ENST00000609104 PLA2G2CQ5R387 149 aa10.03□□□□□ -0.8
USP6NL-205ENST00000609104 TCL1BO95988 128 aa10.03□□□□□ -0.8
USP6NL-205ENST00000609104 DEFB135Q30KP9 77 aa10.03□□□□□ -0.8
USP6NL-205ENST00000609104 SRCAPQ6ZRS2 3230 aa10.03□□□□□ -0.8
USP6NL-205ENST00000609104 CTRLP40313 264 aa10.03□□□□□ -0.8
USP6NL-205ENST00000609104 NRGNQ92686 78 aa10.03□□□□□ -0.8
USP6NL-205ENST00000609104 EXPH5Q8NEV8 1989 aa10.03□□□□□ -0.8
USP6NL-205ENST00000609104 TRAV26-1A0A087WT03 109 aa10.03□□□□□ -0.8
USP6NL-205ENST00000609104 MUC4Q99102 2169 aa10.02□□□□□ -0.8
USP6NL-205ENST00000609104 CEMP1Q6PRD7 247 aaPredicted RBP10.02□□□□□ -0.81
USP6NL-205ENST00000609104 AGRNO00468 2067 aa10.02□□□□□ -0.81
USP6NL-205ENST00000609104 P0DMU3 169 aa10.02□□□□□ -0.81
USP6NL-205ENST00000609104 FAM231AP0DMU4 169 aa10.02□□□□□ -0.81
USP6NL-205ENST00000609104 FAM231CP0DMU5 169 aa10.02□□□□□ -0.81
USP6NL-205ENST00000609104 CXCL5P42830 114 aa10.02□□□□□ -0.81
USP6NL-205ENST00000609104 H3BT86 120 aa10.02□□□□□ -0.81
USP6NL-205ENST00000609104 KRTAP27-1Q3LI81 207 aa10.02□□□□□ -0.81
USP6NL-205ENST00000609104 Q6ZUT4 128 aa10.02□□□□□ -0.81
USP6NL-205ENST00000609104 NDUFA11Q86Y39 141 aa10.01□□□□□ -0.81
USP6NL-205ENST00000609104 COX7BP24311 80 aa10.01□□□□□ -0.81
USP6NL-205ENST00000609104 SPATA12Q7Z6I5 190 aa10.01□□□□□ -0.81
USP6NL-205ENST00000609104 SDIM1Q6ZPB5 146 aa10□□□□□ -0.81
USP6NL-205ENST00000609104 MIAQ16674 131 aa10□□□□□ -0.81
USP6NL-205ENST00000609104 IGLV2-14P01704 120 aa10□□□□□ -0.81
USP6NL-205ENST00000609104 SIRPDQ9H106 197 aa10□□□□□ -0.81
USP6NL-205ENST00000609104 BPY2O14599 106 aa9.99□□□□□ -0.81
USP6NL-205ENST00000609104 RNF138Q8WVD3 245 aa9.99□□□□□ -0.81
USP6NL-205ENST00000609104 WT1P19544 449 aaPredicted RBP9.99□□□□□ -0.81
USP6NL-205ENST00000609104 MED14OSP0DP75 135 aa9.99□□□□□ -0.81
USP6NL-205ENST00000609104 ODF3L1Q8IXM7 274 aa9.99□□□□□ -0.81
USP6NL-205ENST00000609104 C4orf3Q8WVX3 66 aa9.98□□□□□ -0.81
USP6NL-205ENST00000609104 TMEM263Q8WUH6 116 aaKnown RBP9.98□□□□□ -0.81
USP6NL-205ENST00000609104 CASC2Q6XLA1 102 aa9.98□□□□□ -0.81
USP6NL-205ENST00000609104 GPHB5Q86YW7 130 aa9.98□□□□□ -0.81
USP6NL-205ENST00000609104 LINC00643Q86TS7 51 aa9.98□□□□□ -0.81
USP6NL-205ENST00000609104 UNQ9165/PRO28630Q6UXU0 137 aa9.98□□□□□ -0.81
USP6NL-205ENST00000609104 B9D2Q9BPU9 175 aa9.98□□□□□ -0.81
USP6NL-205ENST00000609104 PTPRQQ9UMZ3 2332 aa9.98□□□□□ -0.81
USP6NL-205ENST00000609104 TRBV6-1A0A0K0K1D8 114 aa9.98□□□□□ -0.81
USP6NL-205ENST00000609104 K7EMT4 169 aa9.98□□□□□ -0.81
USP6NL-205ENST00000609104 TP53TG3Q9ULZ0 132 aa9.98□□□□□ -0.81
USP6NL-205ENST00000609104 SLX1AQ9BQ83 275 aa9.97□□□□□ -0.81
USP6NL-205ENST00000609104 PIP4P1Q86T03 277 aa9.97□□□□□ -0.81
USP6NL-205ENST00000609104 LYPD6Q86Y78 171 aa9.97□□□□□ -0.81
USP6NL-205ENST00000609104 TEX49A0A1B0GTD5 131 aa9.97□□□□□ -0.81
USP6NL-205ENST00000609104 ZFP36P26651 326 aaKnown RBP9.97□□□□□ -0.81
USP6NL-205ENST00000609104 RAI1Q7Z5J4 1906 aaPredicted RBP9.97□□□□□ -0.81
USP6NL-205ENST00000609104 LOXL1Q08397 574 aaPredicted RBP9.96□□□□□ -0.81
USP6NL-205ENST00000609104 NDUFV3P56181 108 aaKnown RBP9.96□□□□□ -0.81
USP6NL-205ENST00000609104 SCXQ7RTU7 201 aa9.96□□□□□ -0.81
USP6NL-205ENST00000609104 IGLC6P0CF74 106 aa9.96□□□□□ -0.82
USP6NL-205ENST00000609104 CREBBPQ92793 2442 aa9.96□□□□□ -0.82
USP6NL-205ENST00000609104 LINC00269Q8N2A0 174 aa9.95□□□□□ -0.82
USP6NL-205ENST00000609104 A0A0U1RQV1 116 aa9.95□□□□□ -0.82
USP6NL-205ENST00000609104 MLST8Q9BVC4 326 aa9.95□□□□□ -0.82
USP6NL-205ENST00000609104 IGKV2-24A0A0C4DH68 120 aa9.95□□□□□ -0.82
USP6NL-205ENST00000609104 PDE6GP18545 87 aa9.95□□□□□ -0.82
USP6NL-205ENST00000609104 A0A0J9YXY3 114 aa9.95□□□□□ -0.82
USP6NL-205ENST00000609104 Q8N7P7 452 aa9.95□□□□□ -0.82
USP6NL-205ENST00000609104 C19orf71A6NCJ1 209 aa9.95□□□□□ -0.82
USP6NL-205ENST00000609104 OTOGLQ3ZCN5 2332 aa9.95□□□□□ -0.82
USP6NL-205ENST00000609104 MT-ATP8P03928 68 aa9.94□□□□□ -0.82
USP6NL-205ENST00000609104 SLPIP03973 132 aa9.94□□□□□ -0.82
USP6NL-205ENST00000609104 PIK3CD-AS1Q5SR53 167 aa9.94□□□□□ -0.82
USP6NL-205ENST00000609104 C20orf197Q8N268 126 aa9.94□□□□□ -0.82
USP6NL-205ENST00000609104 A0A096LNI7 61 aa9.94□□□□□ -0.82
USP6NL-205ENST00000609104 KLK5Q9Y337 293 aaPredicted RBP9.94□□□□□ -0.82
USP6NL-205ENST00000609104 HIST2H2BDQ6DRA6 164 aa9.94□□□□□ -0.82
USP6NL-205ENST00000609104 C20orf203Q8NBC4 194 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 221.5 ms