RNA–Protein interactions for RNA: ENST00000602492.5

PPFIA3-204, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 4

Gene PPFIA3, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-204ENST00000602492 C9orf85Q96MD7 179 aa13.44□□□□□ -0.26
PPFIA3-204ENST00000602492 CRIP1P50238 77 aa13.43□□□□□ -0.26
PPFIA3-204ENST00000602492 ZNF80P51504 273 aaPredicted RBP13.43□□□□□ -0.26
PPFIA3-204ENST00000602492 PTH2Q96A98 100 aa13.43□□□□□ -0.26
PPFIA3-204ENST00000602492 SH2D1AO60880 128 aa13.42□□□□□ -0.26
PPFIA3-204ENST00000602492 P01737 135 aa13.42□□□□□ -0.26
PPFIA3-204ENST00000602492 CXCL1P09341 107 aa13.42□□□□□ -0.26
PPFIA3-204ENST00000602492 PRR27Q6MZM9 219 aa13.42□□□□□ -0.26
PPFIA3-204ENST00000602492 OR10G8Q8NGN5 311 aa13.42□□□□□ -0.26
PPFIA3-204ENST00000602492 C7orf77A4D0Y5 90 aa13.41□□□□□ -0.26
PPFIA3-204ENST00000602492 PLA2G1BP04054 148 aaKnown RBP13.41□□□□□ -0.26
PPFIA3-204ENST00000602492 RPS20P60866 119 aaKnown RBP13.41□□□□□ -0.26
PPFIA3-204ENST00000602492 WFDC2Q14508 124 aa13.41□□□□□ -0.26
PPFIA3-204ENST00000602492 LINC01559Q495D7 138 aa13.41□□□□□ -0.26
PPFIA3-204ENST00000602492 NUDT10Q8NFP7 164 aa13.41□□□□□ -0.26
PPFIA3-204ENST00000602492 NUDT11Q96G61 164 aa13.41□□□□□ -0.26
PPFIA3-204ENST00000602492 TRAV8-3A0A0A6YYJ7 113 aa13.4□□□□□ -0.26
PPFIA3-204ENST00000602492 XKRY2A2RUG3 117 aa13.4□□□□□ -0.26
PPFIA3-204ENST00000602492 FAM231BA6NCW3 169 aa13.4□□□□□ -0.26
PPFIA3-204ENST00000602492 IMMP2LQ96T52 175 aa13.4□□□□□ -0.26
PPFIA3-204ENST00000602492 RPP21Q9H633 154 aaKnown RBP13.4□□□□□ -0.26
PPFIA3-204ENST00000602492 GATCO43716 136 aaKnown RBP13.39□□□□□ -0.27
PPFIA3-204ENST00000602492 RNASE3P12724 160 aaKnown RBP13.39□□□□□ -0.27
PPFIA3-204ENST00000602492 Q6ZSA8 131 aa13.39□□□□□ -0.27
PPFIA3-204ENST00000602492 Q8N3U1 123 aa13.39□□□□□ -0.27
PPFIA3-204ENST00000602492 RNASE7Q9H1E1 156 aaKnown RBP13.39□□□□□ -0.27
PPFIA3-204ENST00000602492 V9GYV3 84 aa13.39□□□□□ -0.27
PPFIA3-204ENST00000602492 A8MWL6 223 aa13.38□□□□□ -0.27
PPFIA3-204ENST00000602492 LINC00528Q8N1L1 170 aa13.38□□□□□ -0.27
PPFIA3-204ENST00000602492 GFRA4Q9GZZ7 299 aa13.38□□□□□ -0.27
PPFIA3-204ENST00000602492 GAGE12JA6NER3 117 aa13.37□□□□□ -0.27
PPFIA3-204ENST00000602492 LECT2O14960 151 aa13.37□□□□□ -0.27
PPFIA3-204ENST00000602492 GAGE1Q13065 139 aa13.37□□□□□ -0.27
PPFIA3-204ENST00000602492 GAGE4Q13068 117 aa13.37□□□□□ -0.27
PPFIA3-204ENST00000602492 GAGE5Q13069 117 aa13.37□□□□□ -0.27
PPFIA3-204ENST00000602492 GAGE13Q4V321 117 aa13.37□□□□□ -0.27
PPFIA3-204ENST00000602492 ZFP2Q6ZN57 461 aa13.37□□□□□ -0.27
PPFIA3-204ENST00000602492 RPS10P5Q9NQ39 176 aa13.37□□□□□ -0.27
PPFIA3-204ENST00000602492 A8MWV9 139 aa13.36□□□□□ -0.27
PPFIA3-204ENST00000602492 DNLZQ5SXM8 178 aa13.36□□□□□ -0.27
PPFIA3-204ENST00000602492 DAZ4Q86SG3 579 aaKnown RBP13.36□□□□□ -0.27
PPFIA3-204ENST00000602492 OR2D3Q8NGH3 330 aa13.36□□□□□ -0.27
PPFIA3-204ENST00000602492 TSKUQ8WUA8 353 aa13.36□□□□□ -0.27
PPFIA3-204ENST00000602492 DAZ3Q9NR90 486 aaKnown RBP13.36□□□□□ -0.27
PPFIA3-204ENST00000602492 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.35□□□□□ -0.27
PPFIA3-204ENST00000602492 LINC00694P0DN24 101 aa13.35□□□□□ -0.27
PPFIA3-204ENST00000602492 S100A4P26447 101 aaKnown RBP13.35□□□□□ -0.27
PPFIA3-204ENST00000602492 COX11Q9Y6N1 276 aa13.35□□□□□ -0.27
PPFIA3-204ENST00000602492 TRAV9-1A0A075B6T8 112 aa13.34□□□□□ -0.27
PPFIA3-204ENST00000602492 IGKV3D-20A0A0C4DH25 116 aa13.34□□□□□ -0.27
PPFIA3-204ENST00000602492 FOXA3P55318 350 aaPredicted RBP13.34□□□□□ -0.27
PPFIA3-204ENST00000602492 PIK3CD-AS1Q5SR53 167 aa13.34□□□□□ -0.27
PPFIA3-204ENST00000602492 DEFB104AQ8WTQ1 72 aa13.34□□□□□ -0.27
PPFIA3-204ENST00000602492 IL36BQ9NZH7 164 aa13.34□□□□□ -0.27
PPFIA3-204ENST00000602492 SMIM27A0A1W2PRY6 76 aa13.33□□□□□ -0.28
PPFIA3-204ENST00000602492 KRTAP29-1A8MX34 341 aaPredicted RBP13.33□□□□□ -0.28
PPFIA3-204ENST00000602492 ATRAIDQ6UW56 229 aa13.33□□□□□ -0.28
PPFIA3-204ENST00000602492 BTF3L4Q96K17 158 aa13.33□□□□□ -0.28
PPFIA3-204ENST00000602492 SMCO4Q9NRQ5 59 aa13.33□□□□□ -0.28
PPFIA3-204ENST00000602492 ASIPP42127 132 aa13.32□□□□□ -0.28
PPFIA3-204ENST00000602492 KCNIP4Q6PIL6 250 aa13.32□□□□□ -0.28
PPFIA3-204ENST00000602492 BAALCQ8WXS3 180 aa13.32□□□□□ -0.28
PPFIA3-204ENST00000602492 RMI2Q96E14 147 aa13.32□□□□□ -0.28
PPFIA3-204ENST00000602492 S100PP25815 95 aa13.31□□□□□ -0.28
PPFIA3-204ENST00000602492 Q9UF83 564 aa13.31□□□□□ -0.28
PPFIA3-204ENST00000602492 NAT8BQ9UHF3 227 aa13.31□□□□□ -0.28
PPFIA3-204ENST00000602492 URGCP-MRPS24S4R325 110 aa13.31□□□□□ -0.28
PPFIA3-204ENST00000602492 F2Z2F3 143 aa13.3□□□□□ -0.28
PPFIA3-204ENST00000602492 RPL19P84098 196 aaKnown RBP13.3□□□□□ -0.28
PPFIA3-204ENST00000602492 LINC01620Q4KN68 170 aa13.3□□□□□ -0.28
PPFIA3-204ENST00000602492 UFSP1Q6NVU6 142 aa13.3□□□□□ -0.28
PPFIA3-204ENST00000602492 C14orf178Q8N769 122 aaPredicted RBP13.3□□□□□ -0.28
PPFIA3-204ENST00000602492 SAMD10Q9BYL1 202 aa13.3□□□□□ -0.28
PPFIA3-204ENST00000602492 JPT2Q9H910 190 aa13.3□□□□□ -0.28
PPFIA3-204ENST00000602492 LRP1Q07954 4544 aaKnown RBP13.29□□□□□ -0.28
PPFIA3-204ENST00000602492 OR5AL1P0C617 328 aa13.29□□□□□ -0.28
PPFIA3-204ENST00000602492 IGLC6P0CF74 106 aa13.29□□□□□ -0.28
PPFIA3-204ENST00000602492 CTRLP40313 264 aa13.29□□□□□ -0.28
PPFIA3-204ENST00000602492 SCXQ7RTU7 201 aa13.29□□□□□ -0.28
PPFIA3-204ENST00000602492 Q8N976 141 aa13.29□□□□□ -0.28
PPFIA3-204ENST00000602492 SSBP4Q9BWG4 385 aaPredicted RBP13.29□□□□□ -0.28
PPFIA3-204ENST00000602492 CNFNQ9BYD5 112 aa13.29□□□□□ -0.28
PPFIA3-204ENST00000602492 IGKV2D-24A0A075B6R9 120 aa13.28□□□□□ -0.28
PPFIA3-204ENST00000602492 HIGD1CA8MV81 97 aa13.28□□□□□ -0.28
PPFIA3-204ENST00000602492 RHODO00212 210 aa13.28□□□□□ -0.28
PPFIA3-204ENST00000602492 SNAI2O43623 268 aa13.28□□□□□ -0.28
PPFIA3-204ENST00000602492 WDR73Q6P4I2 378 aa13.28□□□□□ -0.28
PPFIA3-204ENST00000602492 FER1L6-AS1Q8NA97 138 aa13.28□□□□□ -0.28
PPFIA3-204ENST00000602492 SYT8Q8NBV8 401 aa13.28□□□□□ -0.28
PPFIA3-204ENST00000602492 H3BVH4 76 aa13.27□□□□□ -0.29
PPFIA3-204ENST00000602492 NIT1Q86X76 327 aa13.27□□□□□ -0.29
PPFIA3-204ENST00000602492 GTSF1Q8WW33 167 aa13.27□□□□□ -0.29
PPFIA3-204ENST00000602492 DMRTA1Q5VZB9 504 aa13.26□□□□□ -0.29
PPFIA3-204ENST00000602492 ATP5L2Q7Z4Y8 100 aa13.26□□□□□ -0.29
PPFIA3-204ENST00000602492 KLK12Q9UKR0 248 aa13.26□□□□□ -0.29
PPFIA3-204ENST00000602492 TRBV24-1A0A075B6N3 115 aa13.25□□□□□ -0.29
PPFIA3-204ENST00000602492 TMSB15BA0A087X1C1 80 aa13.25□□□□□ -0.29
PPFIA3-204ENST00000602492 A0A1B0GW15 77 aa13.25□□□□□ -0.29
PPFIA3-204ENST00000602492 FAM74A4Q5TZK3 123 aa13.25□□□□□ -0.29
PPFIA3-204ENST00000602492 RASL11AQ6T310 242 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms