RNA–Protein interactions for RNA: ENST00000601393.1

SNRPA-210, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 3

Gene SNRPA, Length 969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-210ENST00000601393 NAT8Q9UHE5 227 aa11.3□□□□□ -0.6
SNRPA-210ENST00000601393 IBA57-AS1B1ANH7 110 aa11.29□□□□□ -0.6
SNRPA-210ENST00000601393 GATCO43716 136 aaKnown RBP11.29□□□□□ -0.6
SNRPA-210ENST00000601393 NTF3P20783 257 aa11.29□□□□□ -0.6
SNRPA-210ENST00000601393 NFE4Q86UQ8 179 aa11.29□□□□□ -0.6
SNRPA-210ENST00000601393 RYR1P21817 5038 aa11.29□□□□□ -0.6
SNRPA-210ENST00000601393 M0QY20 66 aa11.28□□□□□ -0.6
SNRPA-210ENST00000601393 TRGC1P0CF51 173 aa11.28□□□□□ -0.6
SNRPA-210ENST00000601393 SMIM17P0DL12 118 aa11.28□□□□□ -0.6
SNRPA-210ENST00000601393 TMEM218A2RU14 115 aa11.27□□□□□ -0.61
SNRPA-210ENST00000601393 F5H697 171 aa11.27□□□□□ -0.61
SNRPA-210ENST00000601393 IGHV3-30P01768 117 aa11.27□□□□□ -0.61
SNRPA-210ENST00000601393 IGHV3-33P01772 117 aa11.27□□□□□ -0.61
SNRPA-210ENST00000601393 IGHV3-30-3P0DP02 117 aa11.27□□□□□ -0.61
SNRPA-210ENST00000601393 IGHV3-30-5P0DP03 117 aa11.27□□□□□ -0.61
SNRPA-210ENST00000601393 FOXA3P55318 350 aaPredicted RBP11.27□□□□□ -0.61
SNRPA-210ENST00000601393 ERVFC1-1P60608 527 aa11.27□□□□□ -0.61
SNRPA-210ENST00000601393 SUMO4Q6EEV6 95 aa11.27□□□□□ -0.61
SNRPA-210ENST00000601393 DPH3P1Q9H4G8 78 aa11.27□□□□□ -0.61
SNRPA-210ENST00000601393 OSTCQ9NRP0 149 aa11.27□□□□□ -0.61
SNRPA-210ENST00000601393 APOBP04114 4563 aaKnown RBP11.26□□□□□ -0.61
SNRPA-210ENST00000601393 A8MWL6 223 aa11.26□□□□□ -0.61
SNRPA-210ENST00000601393 MGPP08493 103 aa11.26□□□□□ -0.61
SNRPA-210ENST00000601393 RPL23P62829 140 aaKnown RBP11.26□□□□□ -0.61
SNRPA-210ENST00000601393 LAGE3Q14657 143 aa11.26□□□□□ -0.61
SNRPA-210ENST00000601393 NIT1Q86X76 327 aa11.26□□□□□ -0.61
SNRPA-210ENST00000601393 ISOC2Q96AB3 205 aa11.25□□□□□ -0.61
SNRPA-210ENST00000601393 TRBV6-8A0A0A6YYG3 113 aa11.24□□□□□ -0.61
SNRPA-210ENST00000601393 KRTAP10-2P60368 255 aa11.24□□□□□ -0.61
SNRPA-210ENST00000601393 PNRC1Q12796 327 aaPredicted RBP11.24□□□□□ -0.61
SNRPA-210ENST00000601393 NTM-AS1Q6ZSK4 140 aa11.24□□□□□ -0.61
SNRPA-210ENST00000601393 TSKUQ8WUA8 353 aa11.24□□□□□ -0.61
SNRPA-210ENST00000601393 DNAJC30Q96LL9 226 aa11.24□□□□□ -0.61
SNRPA-210ENST00000601393 SEC11CQ9BY50 192 aa11.24□□□□□ -0.61
SNRPA-210ENST00000601393 V9GYV3 84 aa11.24□□□□□ -0.61
SNRPA-210ENST00000601393 FAM231BA6NCW3 169 aa11.23□□□□□ -0.61
SNRPA-210ENST00000601393 H7C1H1 209 aa11.23□□□□□ -0.61
SNRPA-210ENST00000601393 ADCYAP1P18509 176 aa11.23□□□□□ -0.61
SNRPA-210ENST00000601393 TWIST1Q15672 202 aa11.23□□□□□ -0.61
SNRPA-210ENST00000601393 ADIRFQ15847 76 aa11.23□□□□□ -0.61
SNRPA-210ENST00000601393 SPATA12Q7Z6I5 190 aa11.23□□□□□ -0.61
SNRPA-210ENST00000601393 DAZ4Q86SG3 579 aaKnown RBP11.23□□□□□ -0.61
SNRPA-210ENST00000601393 CHCHD7Q9BUK0 85 aa11.23□□□□□ -0.61
SNRPA-210ENST00000601393 GFRA4Q9GZZ7 299 aa11.23□□□□□ -0.61
SNRPA-210ENST00000601393 DAZ3Q9NR90 486 aaKnown RBP11.23□□□□□ -0.61
SNRPA-210ENST00000601393 A0A087WTM6 91 aa11.22□□□□□ -0.61
SNRPA-210ENST00000601393 F8W036 122 aa11.22□□□□□ -0.61
SNRPA-210ENST00000601393 NDUFA5Q16718 116 aa11.22□□□□□ -0.61
SNRPA-210ENST00000601393 C10orf91Q5T1B1 145 aa11.22□□□□□ -0.61
SNRPA-210ENST00000601393 RASL11AQ6T310 242 aa11.22□□□□□ -0.61
SNRPA-210ENST00000601393 PGLYRP4Q96LB8 373 aa11.22□□□□□ -0.61
SNRPA-210ENST00000601393 C15orf54Q8N8G6 183 aa11.21□□□□□ -0.61
SNRPA-210ENST00000601393 HSPG2P98160 4391 aa11.21□□□□□ -0.62
SNRPA-210ENST00000601393 LRCOL1A6NCL2 159 aa11.2□□□□□ -0.62
SNRPA-210ENST00000601393 HIGD1CA8MV81 97 aa11.2□□□□□ -0.62
SNRPA-210ENST00000601393 C16orf90A8MZG2 172 aa11.2□□□□□ -0.62
SNRPA-210ENST00000601393 TMEM97Q5BJF2 176 aa11.2□□□□□ -0.62
SNRPA-210ENST00000601393 GATD1Q8NB37 220 aa11.2□□□□□ -0.62
SNRPA-210ENST00000601393 Q9HAA7 133 aa11.2□□□□□ -0.62
SNRPA-210ENST00000601393 NIT2Q9NQR4 276 aa11.2□□□□□ -0.62
SNRPA-210ENST00000601393 CARHSP1Q9Y2V2 147 aaKnown RBP11.19□□□□□ -0.62
SNRPA-210ENST00000601393 A0A1B0GUT8 65 aa11.18□□□□□ -0.62
SNRPA-210ENST00000601393 IQCJQ1A5X6 159 aa11.18□□□□□ -0.62
SNRPA-210ENST00000601393 FRZBQ92765 325 aa11.18□□□□□ -0.62
SNRPA-210ENST00000601393 TRAV8-3A0A0A6YYJ7 113 aa11.17□□□□□ -0.62
SNRPA-210ENST00000601393 TRAV26-2A0A0B4J265 109 aa11.17□□□□□ -0.62
SNRPA-210ENST00000601393 MPV17L2Q567V2 206 aa11.17□□□□□ -0.62
SNRPA-210ENST00000601393 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.17□□□□□ -0.62
SNRPA-210ENST00000601393 NUP35Q8NFH5 326 aa11.17□□□□□ -0.62
SNRPA-210ENST00000601393 URGCP-MRPS24S4R325 110 aa11.17□□□□□ -0.62
SNRPA-210ENST00000601393 A0A087WX48 190 aa11.16□□□□□ -0.62
SNRPA-210ENST00000601393 PPP1R2P9O14990 202 aa11.16□□□□□ -0.62
SNRPA-210ENST00000601393 SLC7A5P1Q8MH63 180 aa11.16□□□□□ -0.62
SNRPA-210ENST00000601393 TMEM191AQ9H0A3 160 aa11.16□□□□□ -0.62
SNRPA-210ENST00000601393 KLK12Q9UKR0 248 aa11.16□□□□□ -0.62
SNRPA-210ENST00000601393 SMIM27A0A1W2PRY6 76 aa11.15□□□□□ -0.62
SNRPA-210ENST00000601393 MT-ND4LP03901 98 aa11.15□□□□□ -0.62
SNRPA-210ENST00000601393 ATRAIDQ6UW56 229 aa11.15□□□□□ -0.62
SNRPA-210ENST00000601393 SMIM15Q7Z3B0 74 aa11.15□□□□□ -0.62
SNRPA-210ENST00000601393 MAPKAPK5-AS1Q8N8E1 139 aa11.15□□□□□ -0.62
SNRPA-210ENST00000601393 BORCS7Q96B45 105 aa11.15□□□□□ -0.62
SNRPA-210ENST00000601393 ANAPC16Q96DE5 110 aa11.15□□□□□ -0.62
SNRPA-210ENST00000601393 RPL39LQ96EH5 51 aaKnown RBP11.15□□□□□ -0.62
SNRPA-210ENST00000601393 RNF185Q96GF1 192 aa11.15□□□□□ -0.62
SNRPA-210ENST00000601393 DNAH8Q96JB1 4490 aa11.14□□□□□ -0.63
SNRPA-210ENST00000601393 TRBV25-1A0A075B6N4 114 aa11.14□□□□□ -0.63
SNRPA-210ENST00000601393 IGHV1-24A0A0C4DH33 117 aa11.14□□□□□ -0.63
SNRPA-210ENST00000601393 EREGO14944 169 aa11.14□□□□□ -0.63
SNRPA-210ENST00000601393 PKIAP61925 76 aa11.14□□□□□ -0.63
SNRPA-210ENST00000601393 ELOBQ15370 118 aa11.14□□□□□ -0.63
SNRPA-210ENST00000601393 CDPF1Q6NVV7 123 aa11.14□□□□□ -0.63
SNRPA-210ENST00000601393 CHCHD5Q9BSY4 110 aa11.14□□□□□ -0.63
SNRPA-210ENST00000601393 TM2D2Q9BX73 214 aa11.14□□□□□ -0.63
SNRPA-210ENST00000601393 PGPEP1Q9NXJ5 209 aa11.14□□□□□ -0.63
SNRPA-210ENST00000601393 NAT8BQ9UHF3 227 aa11.14□□□□□ -0.63
SNRPA-210ENST00000601393 PSCAO43653 123 aa11.13□□□□□ -0.63
SNRPA-210ENST00000601393 GAS8-AS1O95177 125 aa11.13□□□□□ -0.63
SNRPA-210ENST00000601393 FUSP35637 526 aaKnown RBP eCLIP11.13□□□□□ -0.63
SNRPA-210ENST00000601393 WFDC2Q14508 124 aa11.13□□□□□ -0.63
SNRPA-210ENST00000601393 ENHOQ6UWT2 76 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms