RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 PRSS47A8MTI9 375 aa16■□□□□ 0.15
IRF3-228ENST00000601291 K7EQD1 137 aa16■□□□□ 0.15
IRF3-228ENST00000601291 PMCHP20382 165 aa16■□□□□ 0.15
IRF3-228ENST00000601291 RNASEKQ6P5S7 137 aaKnown RBP16■□□□□ 0.15
IRF3-228ENST00000601291 FA2HQ7L5A8 372 aa16■□□□□ 0.15
IRF3-228ENST00000601291 NIT1Q86X76 327 aa16■□□□□ 0.15
IRF3-228ENST00000601291 NXT2Q9NPJ8 142 aaKnown RBP16■□□□□ 0.15
IRF3-228ENST00000601291 NACAE9PAV3 2078 aa15.99■□□□□ 0.15
IRF3-228ENST00000601291 IFI27P40305 119 aaPredicted RBP15.99■□□□□ 0.15
IRF3-228ENST00000601291 DEFA6Q01524 100 aa15.99■□□□□ 0.15
IRF3-228ENST00000601291 FHL2Q14192 279 aa15.99■□□□□ 0.15
IRF3-228ENST00000601291 TRBV10-1A0A0K0K1A3 114 aa15.98■□□□□ 0.15
IRF3-228ENST00000601291 TRBV6-4A0A1B0GX49 114 aa15.98■□□□□ 0.15
IRF3-228ENST00000601291 ATP5G1P05496 136 aa15.98■□□□□ 0.15
IRF3-228ENST00000601291 LINC00614P0C842 121 aa15.98■□□□□ 0.15
IRF3-228ENST00000601291 CHCHD1Q96BP2 118 aaKnown RBP15.98■□□□□ 0.15
IRF3-228ENST00000601291 DNAJC30Q96LL9 226 aa15.98■□□□□ 0.15
IRF3-228ENST00000601291 SMIM2Q9BVW6 85 aa15.98■□□□□ 0.15
IRF3-228ENST00000601291 TNFRSF18Q9Y5U5 241 aa15.98■□□□□ 0.15
IRF3-228ENST00000601291 P0DMU3 169 aa15.97■□□□□ 0.15
IRF3-228ENST00000601291 FAM231AP0DMU4 169 aa15.97■□□□□ 0.15
IRF3-228ENST00000601291 FAM231CP0DMU5 169 aa15.97■□□□□ 0.15
IRF3-228ENST00000601291 SLC25A29Q8N8R3 303 aa15.97■□□□□ 0.15
IRF3-228ENST00000601291 HOXA5P20719 270 aa15.96■□□□□ 0.15
IRF3-228ENST00000601291 LINC00310P59036 64 aa15.96■□□□□ 0.15
IRF3-228ENST00000601291 RPL32P62910 135 aaKnown RBP15.96■□□□□ 0.15
IRF3-228ENST00000601291 RHOHQ15669 191 aa15.96■□□□□ 0.15
IRF3-228ENST00000601291 Q8N8P6 123 aa15.96■□□□□ 0.15
IRF3-228ENST00000601291 AP5S1Q9NUS5 200 aa15.96■□□□□ 0.15
IRF3-228ENST00000601291 SDHAF1A6NFY7 115 aa15.96■□□□□ 0.14
IRF3-228ENST00000601291 HSBP1O75506 76 aa15.96■□□□□ 0.14
IRF3-228ENST00000601291 ESDP10768 282 aa15.96■□□□□ 0.14
IRF3-228ENST00000601291 NEXN-AS1Q8NBZ9 246 aa15.96■□□□□ 0.14
IRF3-228ENST00000601291 URB1-AS1Q96HZ7 61 aa15.96■□□□□ 0.14
IRF3-228ENST00000601291 PRADC1Q9BSG0 188 aa15.95■□□□□ 0.14
IRF3-228ENST00000601291 TMEM70Q9BUB7 260 aa15.95■□□□□ 0.14
IRF3-228ENST00000601291 HHLA3Q9XRX5 114 aa15.95■□□□□ 0.14
IRF3-228ENST00000601291 S100A2P29034 98 aa15.94■□□□□ 0.14
IRF3-228ENST00000601291 C12orf74Q32Q52 190 aa15.94■□□□□ 0.14
IRF3-228ENST00000601291 PDZD11Q5EBL8 140 aa15.94■□□□□ 0.14
IRF3-228ENST00000601291 VCYO14598 125 aa15.93■□□□□ 0.14
IRF3-228ENST00000601291 NUPR1O60356 82 aa15.93■□□□□ 0.14
IRF3-228ENST00000601291 POLR2KP53803 58 aaKnown RBP15.93■□□□□ 0.14
IRF3-228ENST00000601291 RPL36AP83881 106 aaKnown RBP15.93■□□□□ 0.14
IRF3-228ENST00000601291 C11orf45Q8TAV5 145 aa15.93■□□□□ 0.14
IRF3-228ENST00000601291 RPL36ALQ969Q0 106 aaKnown RBP15.93■□□□□ 0.14
IRF3-228ENST00000601291 PRO0255Q9UI72 69 aa15.93■□□□□ 0.14
IRF3-228ENST00000601291 IGLV2-18A0A075B6J9 118 aa15.92■□□□□ 0.14
IRF3-228ENST00000601291 NHLRC4P0CG21 123 aaPredicted RBP15.92■□□□□ 0.14
IRF3-228ENST00000601291 HIST3H2BBQ8N257 126 aa15.92■□□□□ 0.14
IRF3-228ENST00000601291 TRBV27A0A0K0K1C4 114 aa15.92■□□□□ 0.14
IRF3-228ENST00000601291 KIR2DL4Q99706 377 aa15.92■□□□□ 0.14
IRF3-228ENST00000601291 TRBV7-3A0A075B6L6 115 aa15.91■□□□□ 0.14
IRF3-228ENST00000601291 LINC01546A6NGU7 62 aa15.91■□□□□ 0.14
IRF3-228ENST00000601291 F5H768 121 aa15.91■□□□□ 0.14
IRF3-228ENST00000601291 K7EMI3 77 aa15.91■□□□□ 0.14
IRF3-228ENST00000601291 HTN3P15516 51 aa15.91■□□□□ 0.14
IRF3-228ENST00000601291 CRYBA4P53673 196 aa15.91■□□□□ 0.14
IRF3-228ENST00000601291 ZNRF2Q8NHG8 242 aa15.91■□□□□ 0.14
IRF3-228ENST00000601291 Q9UF83 564 aa15.9■□□□□ 0.14
IRF3-228ENST00000601291 I3L3M4 83 aa15.89■□□□□ 0.13
IRF3-228ENST00000601291 NEGR1Q7Z3B1 354 aa15.89■□□□□ 0.13
IRF3-228ENST00000601291 GAGE12JA6NER3 117 aa15.88■□□□□ 0.13
IRF3-228ENST00000601291 TCAPO15273 167 aa15.88■□□□□ 0.13
IRF3-228ENST00000601291 AMTP48728 403 aa15.88■□□□□ 0.13
IRF3-228ENST00000601291 GAGE1Q13065 139 aa15.88■□□□□ 0.13
IRF3-228ENST00000601291 GAGE4Q13068 117 aa15.88■□□□□ 0.13
IRF3-228ENST00000601291 GAGE5Q13069 117 aa15.88■□□□□ 0.13
IRF3-228ENST00000601291 LAGE3Q14657 143 aa15.88■□□□□ 0.13
IRF3-228ENST00000601291 GAGE13Q4V321 117 aa15.88■□□□□ 0.13
IRF3-228ENST00000601291 TMEM18Q96B42 140 aa15.88■□□□□ 0.13
IRF3-228ENST00000601291 PAX4O43316 350 aa15.87■□□□□ 0.13
IRF3-228ENST00000601291 NANOS2P60321 138 aaKnown RBP15.87■□□□□ 0.13
IRF3-228ENST00000601291 ORMDL2Q53FV1 153 aa15.87■□□□□ 0.13
IRF3-228ENST00000601291 Q6ZTC4 211 aa15.87■□□□□ 0.13
IRF3-228ENST00000601291 IGHV1-24A0A0C4DH33 117 aa15.87■□□□□ 0.13
IRF3-228ENST00000601291 FCER1GP30273 86 aa15.87■□□□□ 0.13
IRF3-228ENST00000601291 FAM19A2Q8N3H0 131 aa15.87■□□□□ 0.13
IRF3-228ENST00000601291 LOC100131303A0A0U1RQF7 123 aa15.86■□□□□ 0.13
IRF3-228ENST00000601291 PMCHL1Q16048 86 aa15.86■□□□□ 0.13
IRF3-228ENST00000601291 DAZ4Q86SG3 579 aaKnown RBP15.86■□□□□ 0.13
IRF3-228ENST00000601291 DAZ3Q9NR90 486 aaKnown RBP15.86■□□□□ 0.13
IRF3-228ENST00000601291 GYPEP15421 78 aa15.85■□□□□ 0.13
IRF3-228ENST00000601291 UBE2D3P61077 147 aa15.85■□□□□ 0.13
IRF3-228ENST00000601291 UBE2D2P62837 147 aa15.85■□□□□ 0.13
IRF3-228ENST00000601291 HIST1H2BLQ99880 126 aa15.85■□□□□ 0.13
IRF3-228ENST00000601291 TRAV26-1A0A087WT03 109 aa15.84■□□□□ 0.13
IRF3-228ENST00000601291 FABP4P15090 132 aa15.84■□□□□ 0.13
IRF3-228ENST00000601291 PHLDA1Q8WV24 401 aaPredicted RBP15.84■□□□□ 0.13
IRF3-228ENST00000601291 PACRGQ96M98 296 aaPredicted RBP15.84■□□□□ 0.13
IRF3-228ENST00000601291 A0A0J9YY99 117 aa15.83■□□□□ 0.13
IRF3-228ENST00000601291 HBDP02042 147 aa15.83■□□□□ 0.13
IRF3-228ENST00000601291 IFITM10A6NMD0 228 aa15.83■□□□□ 0.12
IRF3-228ENST00000601291 NUDT3O95989 172 aa15.83■□□□□ 0.12
IRF3-228ENST00000601291 TSHBP01222 138 aa15.83■□□□□ 0.12
IRF3-228ENST00000601291 COTL1Q14019 142 aa15.83■□□□□ 0.12
IRF3-228ENST00000601291 VSIG2Q96IQ7 327 aa15.83■□□□□ 0.12
IRF3-228ENST00000601291 IGHV3-38A0A0C4DH36 116 aa15.82■□□□□ 0.12
IRF3-228ENST00000601291 LINC00694P0DN24 101 aa15.82■□□□□ 0.12
IRF3-228ENST00000601291 G0S2P27469 103 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms