RNA–Protein interactions for RNA: ENST00000600840.1

TRIM28-214, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 338 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-214ENST00000600840 A0A1B0GUT8 65 aa6.13□□□□□ -1.43
TRIM28-214ENST00000600840 M0R2N4 97 aa6.13□□□□□ -1.43
TRIM28-214ENST00000600840 RTL8CO15255 209 aa6.13□□□□□ -1.43
TRIM28-214ENST00000600840 AMTP48728 403 aa6.13□□□□□ -1.43
TRIM28-214ENST00000600840 UFSP1Q6NVU6 142 aa6.13□□□□□ -1.43
TRIM28-214ENST00000600840 TEX43Q6ZNM6 134 aa6.13□□□□□ -1.43
TRIM28-214ENST00000600840 KIF25-AS1Q9Y6Z4 181 aa6.13□□□□□ -1.43
TRIM28-214ENST00000600840 PKHD1P08F94 4074 aa6.13□□□□□ -1.43
TRIM28-214ENST00000600840 NACAE9PAV3 2078 aa6.13□□□□□ -1.43
TRIM28-214ENST00000600840 H3BVH4 76 aa6.12□□□□□ -1.43
TRIM28-214ENST00000600840 M0R2P5 195 aa6.12□□□□□ -1.43
TRIM28-214ENST00000600840 HSBP1O75506 76 aa6.12□□□□□ -1.43
TRIM28-214ENST00000600840 CRYGDP07320 174 aa6.12□□□□□ -1.43
TRIM28-214ENST00000600840 CTRLP40313 264 aa6.12□□□□□ -1.43
TRIM28-214ENST00000600840 LINC00315P59091 139 aa6.12□□□□□ -1.43
TRIM28-214ENST00000600840 LYZL1Q6UWQ5 148 aa6.12□□□□□ -1.43
TRIM28-214ENST00000600840 MAPKAPK5-AS1Q8N8E1 139 aa6.12□□□□□ -1.43
TRIM28-214ENST00000600840 C18orf32Q8TCD1 76 aa6.12□□□□□ -1.43
TRIM28-214ENST00000600840 ALKBH7Q9BT30 221 aaPredicted RBP6.12□□□□□ -1.43
TRIM28-214ENST00000600840 JPT2Q9H910 190 aa6.12□□□□□ -1.43
TRIM28-214ENST00000600840 MRPL16Q9NX20 251 aaKnown RBP6.12□□□□□ -1.43
TRIM28-214ENST00000600840 DYNC1H1Q14204 4646 aaKnown RBP6.11□□□□□ -1.43
TRIM28-214ENST00000600840 TEX48A0A1B0GUV7 120 aa6.11□□□□□ -1.43
TRIM28-214ENST00000600840 GAGE12BA1L429 117 aa6.11□□□□□ -1.43
TRIM28-214ENST00000600840 RS1O15537 224 aa6.11□□□□□ -1.43
TRIM28-214ENST00000600840 GAGE7O76087 117 aa6.11□□□□□ -1.43
TRIM28-214ENST00000600840 GAGE12FP0CL80 117 aa6.11□□□□□ -1.43
TRIM28-214ENST00000600840 GAGE12GP0CL81 117 aa6.11□□□□□ -1.43
TRIM28-214ENST00000600840 GAGE12IP0CL82 117 aa6.11□□□□□ -1.43
TRIM28-214ENST00000600840 SLAQ13239 276 aa6.11□□□□□ -1.43
TRIM28-214ENST00000600840 ZNF876PQ49A33 203 aa6.11□□□□□ -1.43
TRIM28-214ENST00000600840 ZNF664Q8N3J9 261 aa6.11□□□□□ -1.43
TRIM28-214ENST00000600840 OR10AG1Q8NH19 301 aa6.11□□□□□ -1.43
TRIM28-214ENST00000600840 VAMP8Q9BV40 100 aa6.11□□□□□ -1.43
TRIM28-214ENST00000600840 MSRB1Q9NZV6 116 aa6.11□□□□□ -1.43
TRIM28-214ENST00000600840 IGLV2-18A0A075B6J9 118 aa6.1□□□□□ -1.43
TRIM28-214ENST00000600840 TRGV1A0A0A0MS02 117 aa6.1□□□□□ -1.43
TRIM28-214ENST00000600840 F2Z2F3 143 aa6.1□□□□□ -1.43
TRIM28-214ENST00000600840 DEFB130BP0DP73 79 aa6.1□□□□□ -1.43
TRIM28-214ENST00000600840 DEFB130AP0DP74 79 aa6.1□□□□□ -1.43
TRIM28-214ENST00000600840 HTN3P15516 51 aa6.1□□□□□ -1.43
TRIM28-214ENST00000600840 S100A4P26447 101 aaKnown RBP6.1□□□□□ -1.43
TRIM28-214ENST00000600840 LINC00310P59036 64 aa6.1□□□□□ -1.43
TRIM28-214ENST00000600840 FHL2Q14192 279 aa6.1□□□□□ -1.43
TRIM28-214ENST00000600840 CFAP126Q5VTH2 177 aa6.1□□□□□ -1.43
TRIM28-214ENST00000600840 FER1L6-AS1Q8NA97 138 aa6.1□□□□□ -1.43
TRIM28-214ENST00000600840 ZNF479Q96JC4 524 aa6.1□□□□□ -1.43
TRIM28-214ENST00000600840 LAMTOR2Q9Y2Q5 125 aa6.1□□□□□ -1.43
TRIM28-214ENST00000600840 PKD1P98161 4303 aa6.1□□□□□ -1.43
TRIM28-214ENST00000600840 MUC21A0A0G2JKD1 596 aa6.09□□□□□ -1.43
TRIM28-214ENST00000600840 MUC21A0A140T8X8 626 aa6.09□□□□□ -1.43
TRIM28-214ENST00000600840 P0DMU3 169 aa6.09□□□□□ -1.43
TRIM28-214ENST00000600840 FAM231AP0DMU4 169 aa6.09□□□□□ -1.43
TRIM28-214ENST00000600840 FAM231CP0DMU5 169 aa6.09□□□□□ -1.43
TRIM28-214ENST00000600840 NTF3P20783 257 aa6.09□□□□□ -1.43
TRIM28-214ENST00000600840 CAMPP49913 170 aa6.09□□□□□ -1.43
TRIM28-214ENST00000600840 DAD1P61803 113 aa6.09□□□□□ -1.43
TRIM28-214ENST00000600840 Q6ZSN1 163 aa6.09□□□□□ -1.43
TRIM28-214ENST00000600840 C14orf144Q96I85 54 aa6.09□□□□□ -1.43
TRIM28-214ENST00000600840 PGLYRP4Q96LB8 373 aa6.09□□□□□ -1.43
TRIM28-214ENST00000600840 C2orf88Q9BSF0 95 aa6.09□□□□□ -1.43
TRIM28-214ENST00000600840 HSPB8Q9UJY1 196 aa6.09□□□□□ -1.43
TRIM28-214ENST00000600840 TRAV4A0A0B4J268 109 aa6.08□□□□□ -1.44
TRIM28-214ENST00000600840 M0R381 172 aa6.08□□□□□ -1.44
TRIM28-214ENST00000600840 NUPR1O60356 82 aa6.08□□□□□ -1.44
TRIM28-214ENST00000600840 PPBPP02775 128 aa6.08□□□□□ -1.44
TRIM28-214ENST00000600840 ATP5G1P05496 136 aa6.08□□□□□ -1.44
TRIM28-214ENST00000600840 BTF3P20290 206 aaKnown RBP6.08□□□□□ -1.44
TRIM28-214ENST00000600840 KRTDAPP60985 99 aa6.08□□□□□ -1.44
TRIM28-214ENST00000600840 CACNG7P62955 275 aa6.08□□□□□ -1.44
TRIM28-214ENST00000600840 KIAA1644Q3SXP7 199 aa6.08□□□□□ -1.44
TRIM28-214ENST00000600840 CDPF1Q6NVV7 123 aa6.08□□□□□ -1.44
TRIM28-214ENST00000600840 ZFP2Q6ZN57 461 aa6.08□□□□□ -1.44
TRIM28-214ENST00000600840 Q6ZR54 194 aa6.08□□□□□ -1.44
TRIM28-214ENST00000600840 VSIG2Q96IQ7 327 aa6.08□□□□□ -1.44
TRIM28-214ENST00000600840 MIEN1Q9BRT3 115 aa6.08□□□□□ -1.44
TRIM28-214ENST00000600840 PHLDA3Q9Y5J5 127 aa6.08□□□□□ -1.44
TRIM28-214ENST00000600840 DNAH11Q96DT5 4516 aa6.08□□□□□ -1.44
TRIM28-214ENST00000600840 A8MWV9 139 aa6.07□□□□□ -1.44
TRIM28-214ENST00000600840 M0R143 59 aa6.07□□□□□ -1.44
TRIM28-214ENST00000600840 CIDEAO60543 219 aa6.07□□□□□ -1.44
TRIM28-214ENST00000600840 LINC00614P0C842 121 aa6.07□□□□□ -1.44
TRIM28-214ENST00000600840 GATA1P15976 413 aaPredicted RBP6.07□□□□□ -1.44
TRIM28-214ENST00000600840 RNASEKQ6P5S7 137 aaKnown RBP6.07□□□□□ -1.44
TRIM28-214ENST00000600840 NIT1Q86X76 327 aa6.07□□□□□ -1.44
TRIM28-214ENST00000600840 TMEM70Q9BUB7 260 aa6.07□□□□□ -1.44
TRIM28-214ENST00000600840 PRO1933Q9H354 126 aa6.07□□□□□ -1.44
TRIM28-214ENST00000600840 Q9UF83 564 aa6.07□□□□□ -1.44
TRIM28-214ENST00000600840 HSPG2P98160 4391 aa6.06□□□□□ -1.44
TRIM28-214ENST00000600840 TRGV2A0A075B6R0 118 aa6.06□□□□□ -1.44
TRIM28-214ENST00000600840 EVI2AP22794 236 aa6.06□□□□□ -1.44
TRIM28-214ENST00000600840 CRYBA4P53673 196 aa6.06□□□□□ -1.44
TRIM28-214ENST00000600840 SSTP61278 116 aa6.06□□□□□ -1.44
TRIM28-214ENST00000600840 SPANXN1Q5VSR9 72 aa6.06□□□□□ -1.44
TRIM28-214ENST00000600840 PET117Q6UWS5 81 aa6.06□□□□□ -1.44
TRIM28-214ENST00000600840 SYT8Q8NBV8 401 aa6.06□□□□□ -1.44
TRIM28-214ENST00000600840 OR4C5Q8NGB2 326 aa6.06□□□□□ -1.44
TRIM28-214ENST00000600840 TPPP3Q9BW30 176 aa6.06□□□□□ -1.44
TRIM28-214ENST00000600840 TMEM191AQ9H0A3 160 aa6.06□□□□□ -1.44
TRIM28-214ENST00000600840 UQCR10Q9UDW1 63 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms