RNA–Protein interactions for RNA: ENST00000600440.5

SYDE1-204, Transcript of synapse defective Rho GTPase homolog 1, humanhuman

TSL 1 (best) BASIC

Gene SYDE1, Length 3,058 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE1-204ENST00000600440 PPP1R17O96001 155 aa12.07□□□□□ -0.48
SYDE1-204ENST00000600440 TMEM101Q96IK0 257 aa12.07□□□□□ -0.48
SYDE1-204ENST00000600440 PRR30Q53SZ7 412 aaPredicted RBP12.06□□□□□ -0.48
SYDE1-204ENST00000600440 DEFB124Q8NES8 71 aa12.06□□□□□ -0.48
SYDE1-204ENST00000600440 ADAMTSL4-AS1Q5T5F5 129 aa12.05□□□□□ -0.48
SYDE1-204ENST00000600440 CELSR1Q9NYQ6 3014 aa12.05□□□□□ -0.48
SYDE1-204ENST00000600440 POLR2KP53803 58 aaKnown RBP12.05□□□□□ -0.48
SYDE1-204ENST00000600440 TIMM17AQ99595 171 aa12.05□□□□□ -0.48
SYDE1-204ENST00000600440 Q8N9W7 124 aa12.05□□□□□ -0.48
SYDE1-204ENST00000600440 COL12A1Q99715 3063 aa12.04□□□□□ -0.48
SYDE1-204ENST00000600440 PTPRQQ9UMZ3 2332 aa12.04□□□□□ -0.48
SYDE1-204ENST00000600440 IGHV3-11P01762 117 aa12.04□□□□□ -0.48
SYDE1-204ENST00000600440 UNQ9165/PRO28630Q6UXU0 137 aa12.04□□□□□ -0.48
SYDE1-204ENST00000600440 TRBV30A0A0K0K1B3 111 aa12.04□□□□□ -0.48
SYDE1-204ENST00000600440 IGHV3-30-3P0DP02 117 aa12.04□□□□□ -0.48
SYDE1-204ENST00000600440 TIMM21Q9BVV7 248 aa12.04□□□□□ -0.48
SYDE1-204ENST00000600440 TRAV41A0A0B4J266 112 aa12.03□□□□□ -0.48
SYDE1-204ENST00000600440 TRBV12-3P01733 135 aa12.03□□□□□ -0.48
SYDE1-204ENST00000600440 C9orf139Q6ZV77 190 aa12.03□□□□□ -0.48
SYDE1-204ENST00000600440 TMEM219Q86XT9 240 aa12.03□□□□□ -0.48
SYDE1-204ENST00000600440 IGHV3-73A0A0B4J1V6 119 aa12.02□□□□□ -0.48
SYDE1-204ENST00000600440 B9A039 149 aa12.02□□□□□ -0.48
SYDE1-204ENST00000600440 I3L3M4 83 aa12.02□□□□□ -0.48
SYDE1-204ENST00000600440 FAM110DQ8TAY7 271 aaPredicted RBP12.02□□□□□ -0.48
SYDE1-204ENST00000600440 TMEM126AQ9H061 195 aa12.02□□□□□ -0.48
SYDE1-204ENST00000600440 HTN1P15515 57 aa12.02□□□□□ -0.49
SYDE1-204ENST00000600440 LINC00315P59091 139 aa12.02□□□□□ -0.49
SYDE1-204ENST00000600440 ZNF625Q96I27 306 aaPredicted RBP12.01□□□□□ -0.49
SYDE1-204ENST00000600440 NDUFA12Q9UI09 145 aa12.01□□□□□ -0.49
SYDE1-204ENST00000600440 ZFHX3Q15911 3703 aa12.01□□□□□ -0.49
SYDE1-204ENST00000600440 TRAV12-2A0A075B6T6 113 aa12□□□□□ -0.49
SYDE1-204ENST00000600440 CD28P10747 220 aa12□□□□□ -0.49
SYDE1-204ENST00000600440 HERVK_113P63121 156 aa12□□□□□ -0.49
SYDE1-204ENST00000600440 ZFHX2Q9C0A1 2572 aaPredicted RBP12□□□□□ -0.49
SYDE1-204ENST00000600440 MRPL53Q96EL3 112 aaKnown RBP12□□□□□ -0.49
SYDE1-204ENST00000600440 H3BT86 120 aa12□□□□□ -0.49
SYDE1-204ENST00000600440 EDA2RQ9HAV5 297 aa12□□□□□ -0.49
SYDE1-204ENST00000600440 CSDC2Q9Y534 153 aaKnown RBP12□□□□□ -0.49
SYDE1-204ENST00000600440 KIF25-AS1Q9Y6Z4 181 aa12□□□□□ -0.49
SYDE1-204ENST00000600440 IGHV3OR16-10A0A075B7F0 116 aa11.99□□□□□ -0.49
SYDE1-204ENST00000600440 NPFFO15130 113 aa11.99□□□□□ -0.49
SYDE1-204ENST00000600440 OTOGLQ3ZCN5 2332 aa11.99□□□□□ -0.49
SYDE1-204ENST00000600440 UBTD1Q9HAC8 227 aa11.99□□□□□ -0.49
SYDE1-204ENST00000600440 ODF3BA8MYP8 253 aa11.98□□□□□ -0.49
SYDE1-204ENST00000600440 NDUFA7O95182 113 aa11.98□□□□□ -0.49
SYDE1-204ENST00000600440 ITLN2Q8WWU7 325 aaPredicted RBP11.98□□□□□ -0.49
SYDE1-204ENST00000600440 OVOL1O14753 267 aa11.97□□□□□ -0.49
SYDE1-204ENST00000600440 GRNP28799 593 aaKnown RBP11.97□□□□□ -0.49
SYDE1-204ENST00000600440 KLK9Q9UKQ9 250 aa11.97□□□□□ -0.49
SYDE1-204ENST00000600440 CEP295Q9C0D2 2601 aa11.97□□□□□ -0.49
SYDE1-204ENST00000600440 SMCR5Q8TEV8 140 aa11.97□□□□□ -0.49
SYDE1-204ENST00000600440 PRO3102Q9H379 93 aa11.97□□□□□ -0.49
SYDE1-204ENST00000600440 IGLV4-3A0A075B6K6 122 aa11.97□□□□□ -0.49
SYDE1-204ENST00000600440 IGHV4OR15-8A0A075B7B6 117 aa11.97□□□□□ -0.49
SYDE1-204ENST00000600440 A0A087WW49 117 aa11.97□□□□□ -0.49
SYDE1-204ENST00000600440 LST1O00453 97 aa11.97□□□□□ -0.49
SYDE1-204ENST00000600440 DEFB123Q8N688 67 aa11.97□□□□□ -0.49
SYDE1-204ENST00000600440 LY6G5BQ8NDX9 201 aa11.97□□□□□ -0.49
SYDE1-204ENST00000600440 KLRB1Q12918 225 aa11.96□□□□□ -0.49
SYDE1-204ENST00000600440 Q8N6K4 173 aa11.96□□□□□ -0.49
SYDE1-204ENST00000600440 C3orf22Q8N5N4 141 aa11.96□□□□□ -0.5
SYDE1-204ENST00000600440 LENEPQ9Y5L5 61 aa11.96□□□□□ -0.5
SYDE1-204ENST00000600440 CUBNO60494 3623 aa11.96□□□□□ -0.5
SYDE1-204ENST00000600440 TRBV27A0A0K0K1C4 114 aa11.95□□□□□ -0.5
SYDE1-204ENST00000600440 ATRXP46100 2492 aa11.95□□□□□ -0.5
SYDE1-204ENST00000600440 TRBV7-7A0A0K0K1E9 115 aa11.95□□□□□ -0.5
SYDE1-204ENST00000600440 RHOHQ15669 191 aa11.95□□□□□ -0.5
SYDE1-204ENST00000600440 C20orf203Q8NBC4 194 aa11.95□□□□□ -0.5
SYDE1-204ENST00000600440 LITAFQ99732 161 aa11.95□□□□□ -0.5
SYDE1-204ENST00000600440 EDN2P20800 178 aa11.94□□□□□ -0.5
SYDE1-204ENST00000600440 NRGNQ92686 78 aa11.94□□□□□ -0.5
SYDE1-204ENST00000600440 SPANXA1Q9NS26 97 aa11.94□□□□□ -0.5
SYDE1-204ENST00000600440 TRBV7-1A0A0A6YYK4 115 aa11.94□□□□□ -0.5
SYDE1-204ENST00000600440 M0R1W7 72 aa11.94□□□□□ -0.5
SYDE1-204ENST00000600440 EBI3Q14213 229 aa11.94□□□□□ -0.5
SYDE1-204ENST00000600440 FAM19A5Q7Z5A7 132 aaPredicted RBP11.94□□□□□ -0.5
SYDE1-204ENST00000600440 GAGE2AQ6NT46 116 aa11.93□□□□□ -0.5
SYDE1-204ENST00000600440 ZFP36P26651 326 aaKnown RBP11.93□□□□□ -0.5
SYDE1-204ENST00000600440 DNAJC30Q96LL9 226 aa11.93□□□□□ -0.5
SYDE1-204ENST00000600440 SPG11Q96JI7 2443 aa11.93□□□□□ -0.5
SYDE1-204ENST00000600440 CSPG4Q6UVK1 2322 aa11.93□□□□□ -0.5
SYDE1-204ENST00000600440 TMEM61Q8N0U2 210 aa11.92□□□□□ -0.5
SYDE1-204ENST00000600440 POM121L12Q8N7R1 296 aa11.92□□□□□ -0.5
SYDE1-204ENST00000600440 M0QY20 66 aa11.92□□□□□ -0.5
SYDE1-204ENST00000600440 SAA4P35542 130 aa11.92□□□□□ -0.5
SYDE1-204ENST00000600440 MIAQ16674 131 aa11.92□□□□□ -0.5
SYDE1-204ENST00000600440 PLA2G2CQ5R387 149 aa11.92□□□□□ -0.5
SYDE1-204ENST00000600440 U3KQE9 123 aa11.92□□□□□ -0.5
SYDE1-204ENST00000600440 FAM240AA0A1B0GVK7 77 aa11.92□□□□□ -0.5
SYDE1-204ENST00000600440 hADV29S1A0JD25 119 aa11.92□□□□□ -0.5
SYDE1-204ENST00000600440 NXPH4O95158 308 aa11.92□□□□□ -0.5
SYDE1-204ENST00000600440 IGHV1-69P01742 117 aa11.92□□□□□ -0.5
SYDE1-204ENST00000600440 MINOS1Q5TGZ0 78 aa11.92□□□□□ -0.5
SYDE1-204ENST00000600440 TRAV13-1A0A0B4J241 112 aa11.91□□□□□ -0.5
SYDE1-204ENST00000600440 KNCNA6PVL3 124 aa11.91□□□□□ -0.5
SYDE1-204ENST00000600440 RHPN1-AS1Q9BWJ2 59 aa11.91□□□□□ -0.5
SYDE1-204ENST00000600440 UQCRQO14949 82 aa11.9□□□□□ -0.5
SYDE1-204ENST00000600440 PROK1P58294 105 aa11.9□□□□□ -0.5
SYDE1-204ENST00000600440 DAZ2Q13117 558 aaKnown RBP11.9□□□□□ -0.5
SYDE1-204ENST00000600440 NSUN5P1Q3KNT7 163 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms