RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 UFSP1Q6NVU6 142 aa9.29□□□□□ -0.92
SHKBP1-209ENST00000595803 LINC00612Q8N6U2 182 aa9.29□□□□□ -0.92
SHKBP1-209ENST00000595803 ZNF479Q96JC4 524 aa9.29□□□□□ -0.92
SHKBP1-209ENST00000595803 LAMTOR2Q9Y2Q5 125 aa9.29□□□□□ -0.92
SHKBP1-209ENST00000595803 RYR1P21817 5038 aa9.28□□□□□ -0.92
SHKBP1-209ENST00000595803 TRGV4A0A0C4DH28 118 aa9.28□□□□□ -0.92
SHKBP1-209ENST00000595803 TNFRSF6BO95407 300 aa9.28□□□□□ -0.92
SHKBP1-209ENST00000595803 NPYP01303 97 aa9.28□□□□□ -0.92
SHKBP1-209ENST00000595803 DAD1P61803 113 aa9.28□□□□□ -0.92
SHKBP1-209ENST00000595803 LOC389332A0A1B0GUA5 103 aa9.27□□□□□ -0.93
SHKBP1-209ENST00000595803 GAS8-AS1O95177 125 aa9.27□□□□□ -0.93
SHKBP1-209ENST00000595803 IQCJQ1A5X6 159 aa9.27□□□□□ -0.93
SHKBP1-209ENST00000595803 PRSS3P2Q8NHM4 247 aa9.27□□□□□ -0.93
SHKBP1-209ENST00000595803 C18orf32Q8TCD1 76 aa9.27□□□□□ -0.93
SHKBP1-209ENST00000595803 C18orf15Q96N68 181 aa9.27□□□□□ -0.93
SHKBP1-209ENST00000595803 MAP1LC3AQ9H492 121 aa9.27□□□□□ -0.93
SHKBP1-209ENST00000595803 M0QY20 66 aa9.26□□□□□ -0.93
SHKBP1-209ENST00000595803 Q6ZSN1 163 aa9.26□□□□□ -0.93
SHKBP1-209ENST00000595803 NIT1Q86X76 327 aa9.26□□□□□ -0.93
SHKBP1-209ENST00000595803 NRACQ8N912 160 aa9.26□□□□□ -0.93
SHKBP1-209ENST00000595803 RPL39LQ96EH5 51 aaKnown RBP9.26□□□□□ -0.93
SHKBP1-209ENST00000595803 C11orf68Q9H3H3 251 aaKnown RBP9.26□□□□□ -0.93
SHKBP1-209ENST00000595803 ST20Q9HBF5 79 aa9.26□□□□□ -0.93
SHKBP1-209ENST00000595803 NIT2Q9NQR4 276 aa9.26□□□□□ -0.93
SHKBP1-209ENST00000595803 STARD9Q9P2P6 4700 aa9.25□□□□□ -0.93
SHKBP1-209ENST00000595803 A0A0J9YWU9 116 aa9.25□□□□□ -0.93
SHKBP1-209ENST00000595803 C20orf78Q9BR46 151 aa9.25□□□□□ -0.93
SHKBP1-209ENST00000595803 CELA1Q9UNI1 258 aa9.25□□□□□ -0.93
SHKBP1-209ENST00000595803 TNFRSF18Q9Y5U5 241 aa9.25□□□□□ -0.93
SHKBP1-209ENST00000595803 PRSS47A8MTI9 375 aa9.24□□□□□ -0.93
SHKBP1-209ENST00000595803 ATP5G1P05496 136 aa9.24□□□□□ -0.93
SHKBP1-209ENST00000595803 LINC00614P0C842 121 aa9.24□□□□□ -0.93
SHKBP1-209ENST00000595803 SUMO2P61956 95 aaKnown RBP9.24□□□□□ -0.93
SHKBP1-209ENST00000595803 SNRPEP62304 92 aaKnown RBP9.24□□□□□ -0.93
SHKBP1-209ENST00000595803 FHL2Q14192 279 aa9.24□□□□□ -0.93
SHKBP1-209ENST00000595803 FA2HQ7L5A8 372 aa9.24□□□□□ -0.93
SHKBP1-209ENST00000595803 DNAJC30Q96LL9 226 aa9.24□□□□□ -0.93
SHKBP1-209ENST00000595803 EDA2RQ9HAV5 297 aa9.24□□□□□ -0.93
SHKBP1-209ENST00000595803 TRBV6-4A0A1B0GX49 114 aa9.23□□□□□ -0.93
SHKBP1-209ENST00000595803 IFI27P40305 119 aaPredicted RBP9.23□□□□□ -0.93
SHKBP1-209ENST00000595803 C12orf74Q32Q52 190 aa9.23□□□□□ -0.93
SHKBP1-209ENST00000595803 COA6Q5JTJ3 125 aaKnown RBP9.23□□□□□ -0.93
SHKBP1-209ENST00000595803 ZFAND6Q6FIF0 208 aa9.23□□□□□ -0.93
SHKBP1-209ENST00000595803 RNASEKQ6P5S7 137 aaKnown RBP9.23□□□□□ -0.93
SHKBP1-209ENST00000595803 Q8N8P6 123 aa9.23□□□□□ -0.93
SHKBP1-209ENST00000595803 PRADC1Q9BSG0 188 aa9.23□□□□□ -0.93
SHKBP1-209ENST00000595803 NXT2Q9NPJ8 142 aaKnown RBP9.23□□□□□ -0.93
SHKBP1-209ENST00000595803 HHLA3Q9XRX5 114 aa9.23□□□□□ -0.93
SHKBP1-209ENST00000595803 FRAS1Q86XX4 4008 aa9.22□□□□□ -0.93
SHKBP1-209ENST00000595803 TRBV10-1A0A0K0K1A3 114 aa9.22□□□□□ -0.93
SHKBP1-209ENST00000595803 TRBV6-5A0A0K0K1A5 114 aa9.22□□□□□ -0.93
SHKBP1-209ENST00000595803 K7EQD1 137 aa9.22□□□□□ -0.93
SHKBP1-209ENST00000595803 VCYO14598 125 aa9.22□□□□□ -0.93
SHKBP1-209ENST00000595803 SERF1AO75920 110 aa9.22□□□□□ -0.93
SHKBP1-209ENST00000595803 P0DMU3 169 aa9.22□□□□□ -0.93
SHKBP1-209ENST00000595803 FAM231AP0DMU4 169 aa9.22□□□□□ -0.93
SHKBP1-209ENST00000595803 FAM231CP0DMU5 169 aa9.22□□□□□ -0.93
SHKBP1-209ENST00000595803 PMCHP20382 165 aa9.22□□□□□ -0.93
SHKBP1-209ENST00000595803 HOXA5P20719 270 aa9.22□□□□□ -0.93
SHKBP1-209ENST00000595803 SLC25A29Q8N8R3 303 aa9.22□□□□□ -0.93
SHKBP1-209ENST00000595803 C11orf45Q8TAV5 145 aa9.22□□□□□ -0.93
SHKBP1-209ENST00000595803 CHCHD1Q96BP2 118 aaKnown RBP9.22□□□□□ -0.93
SHKBP1-209ENST00000595803 NACAE9PAV3 2078 aa9.21□□□□□ -0.93
SHKBP1-209ENST00000595803 C5orf52A6NGY3 159 aa9.21□□□□□ -0.94
SHKBP1-209ENST00000595803 F5H768 121 aa9.21□□□□□ -0.94
SHKBP1-209ENST00000595803 HTN3P15516 51 aa9.21□□□□□ -0.94
SHKBP1-209ENST00000595803 RPL36AP83881 106 aaKnown RBP9.21□□□□□ -0.94
SHKBP1-209ENST00000595803 RHOHQ15669 191 aa9.21□□□□□ -0.94
SHKBP1-209ENST00000595803 NEXN-AS1Q8NBZ9 246 aa9.21□□□□□ -0.94
SHKBP1-209ENST00000595803 ZNRF2Q8NHG8 242 aa9.21□□□□□ -0.94
SHKBP1-209ENST00000595803 RPL36ALQ969Q0 106 aaKnown RBP9.21□□□□□ -0.94
SHKBP1-209ENST00000595803 PRO0255Q9UI72 69 aa9.21□□□□□ -0.94
SHKBP1-209ENST00000595803 SDHAF1A6NFY7 115 aa9.2□□□□□ -0.94
SHKBP1-209ENST00000595803 NUPR1O60356 82 aa9.2□□□□□ -0.94
SHKBP1-209ENST00000595803 HSBP1O75506 76 aa9.2□□□□□ -0.94
SHKBP1-209ENST00000595803 S100A2P29034 98 aa9.2□□□□□ -0.94
SHKBP1-209ENST00000595803 POLR2KP53803 58 aaKnown RBP9.2□□□□□ -0.94
SHKBP1-209ENST00000595803 RPL32P62910 135 aaKnown RBP9.2□□□□□ -0.94
SHKBP1-209ENST00000595803 SMIM2Q9BVW6 85 aa9.2□□□□□ -0.94
SHKBP1-209ENST00000595803 HUWE1Q7Z6Z7 4374 aaKnown RBP9.19□□□□□ -0.94
SHKBP1-209ENST00000595803 GAGE12JA6NER3 117 aa9.19□□□□□ -0.94
SHKBP1-209ENST00000595803 PAX4O43316 350 aa9.19□□□□□ -0.94
SHKBP1-209ENST00000595803 ESDP10768 282 aa9.19□□□□□ -0.94
SHKBP1-209ENST00000595803 CRYBA4P53673 196 aa9.19□□□□□ -0.94
SHKBP1-209ENST00000595803 GAGE1Q13065 139 aa9.19□□□□□ -0.94
SHKBP1-209ENST00000595803 GAGE4Q13068 117 aa9.19□□□□□ -0.94
SHKBP1-209ENST00000595803 GAGE5Q13069 117 aa9.19□□□□□ -0.94
SHKBP1-209ENST00000595803 GAGE13Q4V321 117 aa9.19□□□□□ -0.94
SHKBP1-209ENST00000595803 URB1-AS1Q96HZ7 61 aa9.19□□□□□ -0.94
SHKBP1-209ENST00000595803 KIR2DL4Q99706 377 aa9.19□□□□□ -0.94
SHKBP1-209ENST00000595803 TMEM70Q9BUB7 260 aa9.19□□□□□ -0.94
SHKBP1-209ENST00000595803 AP5S1Q9NUS5 200 aa9.19□□□□□ -0.94
SHKBP1-209ENST00000595803 IGLV2-18A0A075B6J9 118 aa9.18□□□□□ -0.94
SHKBP1-209ENST00000595803 TRBV7-3A0A075B6L6 115 aa9.18□□□□□ -0.94
SHKBP1-209ENST00000595803 I3L3M4 83 aa9.18□□□□□ -0.94
SHKBP1-209ENST00000595803 TCAPO15273 167 aa9.18□□□□□ -0.94
SHKBP1-209ENST00000595803 NANOS2P60321 138 aaKnown RBP9.18□□□□□ -0.94
SHKBP1-209ENST00000595803 PDZD11Q5EBL8 140 aa9.18□□□□□ -0.94
SHKBP1-209ENST00000595803 NEGR1Q7Z3B1 354 aa9.18□□□□□ -0.94
SHKBP1-209ENST00000595803 HIST3H2BBQ8N257 126 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms