RNA–Protein interactions for RNA: ENST00000590556.1

DDX39A-214, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-214ENST00000590556 RASL11AQ6T310 242 aa13.19□□□□□ -0.3
DDX39A-214ENST00000590556 SVBPQ8N300 66 aa13.19□□□□□ -0.3
DDX39A-214ENST00000590556 RPS10P5Q9NQ39 176 aa13.19□□□□□ -0.3
DDX39A-214ENST00000590556 A0A087WWC5 75 aa13.18□□□□□ -0.3
DDX39A-214ENST00000590556 TIRAPP58753 221 aa13.18□□□□□ -0.3
DDX39A-214ENST00000590556 ATP5L2Q7Z4Y8 100 aa13.18□□□□□ -0.3
DDX39A-214ENST00000590556 GATD1Q8NB37 220 aa13.18□□□□□ -0.3
DDX39A-214ENST00000590556 DNAJC30Q96LL9 226 aa13.18□□□□□ -0.3
DDX39A-214ENST00000590556 GTSF1LQ9H1H1 148 aa13.18□□□□□ -0.3
DDX39A-214ENST00000590556 TRAV26-2A0A0B4J265 109 aa13.17□□□□□ -0.3
DDX39A-214ENST00000590556 A0A1B0GXF2 115 aa13.17□□□□□ -0.3
DDX39A-214ENST00000590556 SNAPINO95295 136 aa13.17□□□□□ -0.3
DDX39A-214ENST00000590556 UBE2D3P61077 147 aa13.17□□□□□ -0.3
DDX39A-214ENST00000590556 UBE2D2P62837 147 aa13.17□□□□□ -0.3
DDX39A-214ENST00000590556 KCNIP4Q6PIL6 250 aa13.17□□□□□ -0.3
DDX39A-214ENST00000590556 AMN1Q8IY45 258 aa13.17□□□□□ -0.3
DDX39A-214ENST00000590556 BTF3L4Q96K17 158 aa13.17□□□□□ -0.3
DDX39A-214ENST00000590556 TMEM242Q9NWH2 141 aa13.17□□□□□ -0.3
DDX39A-214ENST00000590556 TNFRSF18Q9Y5U5 241 aa13.17□□□□□ -0.3
DDX39A-214ENST00000590556 RAB4AP20338 218 aa13.16□□□□□ -0.3
DDX39A-214ENST00000590556 RNF185Q96GF1 192 aa13.16□□□□□ -0.3
DDX39A-214ENST00000590556 UPK3BQ9BT76 320 aa13.16□□□□□ -0.3
DDX39A-214ENST00000590556 NIT2Q9NQR4 276 aa13.16□□□□□ -0.3
DDX39A-214ENST00000590556 SACSQ9NZJ4 4579 aa13.15□□□□□ -0.3
DDX39A-214ENST00000590556 S100PP25815 95 aa13.15□□□□□ -0.3
DDX39A-214ENST00000590556 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.15□□□□□ -0.3
DDX39A-214ENST00000590556 FRZBQ92765 325 aa13.15□□□□□ -0.3
DDX39A-214ENST00000590556 FAM104BQ5XKR9 115 aa13.14□□□□□ -0.31
DDX39A-214ENST00000590556 DNAH6Q9C0G6 4158 aa13.13□□□□□ -0.31
DDX39A-214ENST00000590556 LELP1Q5T871 98 aa13.13□□□□□ -0.31
DDX39A-214ENST00000590556 MRAP2Q96G30 205 aa13.13□□□□□ -0.31
DDX39A-214ENST00000590556 Q9H8V8 135 aa13.13□□□□□ -0.31
DDX39A-214ENST00000590556 URGCP-MRPS24S4R325 110 aa13.13□□□□□ -0.31
DDX39A-214ENST00000590556 IGLV2-18A0A075B6J9 118 aa13.12□□□□□ -0.31
DDX39A-214ENST00000590556 TRAV9-1A0A075B6T8 112 aa13.12□□□□□ -0.31
DDX39A-214ENST00000590556 TRAV8-6A0A0B4J262 113 aa13.12□□□□□ -0.31
DDX39A-214ENST00000590556 IGHV3-38A0A0C4DH36 116 aa13.12□□□□□ -0.31
DDX39A-214ENST00000590556 OR10J3Q5JRS4 329 aa13.12□□□□□ -0.31
DDX39A-214ENST00000590556 DAZ4Q86SG3 579 aaKnown RBP13.12□□□□□ -0.31
DDX39A-214ENST00000590556 RPL39LQ96EH5 51 aaKnown RBP13.12□□□□□ -0.31
DDX39A-214ENST00000590556 DAZ3Q9NR90 486 aaKnown RBP13.12□□□□□ -0.31
DDX39A-214ENST00000590556 MRPL51Q4U2R6 128 aaKnown RBP13.11□□□□□ -0.31
DDX39A-214ENST00000590556 SIVA1O15304 175 aa13.1□□□□□ -0.31
DDX39A-214ENST00000590556 GAS8-AS1O95177 125 aa13.1□□□□□ -0.31
DDX39A-214ENST00000590556 WFDC10BQ8IUB3 73 aa13.1□□□□□ -0.31
DDX39A-214ENST00000590556 KMT2AQ03164 3969 aa13.1□□□□□ -0.31
DDX39A-214ENST00000590556 RYR2Q92736 4967 aa13.09□□□□□ -0.31
DDX39A-214ENST00000590556 SMKR1H3BMG3 65 aa13.09□□□□□ -0.31
DDX39A-214ENST00000590556 M0R2N4 97 aa13.09□□□□□ -0.31
DDX39A-214ENST00000590556 NCR2O95944 276 aa13.09□□□□□ -0.31
DDX39A-214ENST00000590556 CKS2P33552 79 aa13.08□□□□□ -0.32
DDX39A-214ENST00000590556 TMEM97Q5BJF2 176 aa13.08□□□□□ -0.32
DDX39A-214ENST00000590556 HYDINQ4G0P3 5121 aa13.07□□□□□ -0.32
DDX39A-214ENST00000590556 TRBV6-5A0A0K0K1A5 114 aa13.07□□□□□ -0.32
DDX39A-214ENST00000590556 NBDYA0A0U1RRE5 68 aa13.07□□□□□ -0.32
DDX39A-214ENST00000590556 PPP1R17O96001 155 aa13.07□□□□□ -0.32
DDX39A-214ENST00000590556 RPS10P46783 165 aaKnown RBP13.07□□□□□ -0.32
DDX39A-214ENST00000590556 ST20Q9HBF5 79 aa13.07□□□□□ -0.32
DDX39A-214ENST00000590556 TRBV6-8A0A0A6YYG3 113 aa13.06□□□□□ -0.32
DDX39A-214ENST00000590556 SDHAF1A6NFY7 115 aa13.06□□□□□ -0.32
DDX39A-214ENST00000590556 ATRAIDQ6UW56 229 aa13.06□□□□□ -0.32
DDX39A-214ENST00000590556 PPBPP02775 128 aa13.05□□□□□ -0.32
DDX39A-214ENST00000590556 DNAH10OSP0CZ25 163 aa13.05□□□□□ -0.32
DDX39A-214ENST00000590556 TTC32Q5I0X7 151 aa13.05□□□□□ -0.32
DDX39A-214ENST00000590556 NRACQ8N912 160 aa13.05□□□□□ -0.32
DDX39A-214ENST00000590556 D6R8Y8 96 aa13.04□□□□□ -0.32
DDX39A-214ENST00000590556 Q6ZR54 194 aa13.04□□□□□ -0.32
DDX39A-214ENST00000590556 TMEM136Q6ZRR5 245 aa13.04□□□□□ -0.32
DDX39A-214ENST00000590556 NTM-AS1Q6ZSK4 140 aa13.04□□□□□ -0.32
DDX39A-214ENST00000590556 PMCHP20382 165 aa13.03□□□□□ -0.32
DDX39A-214ENST00000590556 COTL1Q14019 142 aa13.03□□□□□ -0.32
DDX39A-214ENST00000590556 ORMDL3Q8N138 153 aa13.03□□□□□ -0.32
DDX39A-214ENST00000590556 DEFB104AQ8WTQ1 72 aa13.03□□□□□ -0.32
DDX39A-214ENST00000590556 TMEM70Q9BUB7 260 aa13.03□□□□□ -0.32
DDX39A-214ENST00000590556 TRBV25-1A0A075B6N4 114 aa13.02□□□□□ -0.33
DDX39A-214ENST00000590556 TRAV9-2A0A087WT02 112 aa13.02□□□□□ -0.33
DDX39A-214ENST00000590556 IGHV1-24A0A0C4DH33 117 aa13.02□□□□□ -0.33
DDX39A-214ENST00000590556 I3L3M4 83 aa13.02□□□□□ -0.33
DDX39A-214ENST00000590556 ELOBQ15370 118 aa13.02□□□□□ -0.33
DDX39A-214ENST00000590556 COX19Q49B96 90 aa13.02□□□□□ -0.33
DDX39A-214ENST00000590556 LINC01556Q5JQF7 62 aa13.02□□□□□ -0.33
DDX39A-214ENST00000590556 CHCHD5Q9BSY4 110 aa13.02□□□□□ -0.33
DDX39A-214ENST00000590556 TRBV24-1A0A075B6N3 115 aa13.01□□□□□ -0.33
DDX39A-214ENST00000590556 TGIF2-C20orf24A0A0A6YYL0 155 aa13.01□□□□□ -0.33
DDX39A-214ENST00000590556 TNFRSF6BO95407 300 aa13.01□□□□□ -0.33
DDX39A-214ENST00000590556 IGHV3-30P01768 117 aa13.01□□□□□ -0.33
DDX39A-214ENST00000590556 IGHV3-33P01772 117 aa13.01□□□□□ -0.33
DDX39A-214ENST00000590556 IGHV3-30-3P0DP02 117 aa13.01□□□□□ -0.33
DDX39A-214ENST00000590556 IGHV3-30-5P0DP03 117 aa13.01□□□□□ -0.33
DDX39A-214ENST00000590556 POLR2KP53803 58 aaKnown RBP13.01□□□□□ -0.33
DDX39A-214ENST00000590556 SUMO2P61956 95 aaKnown RBP13.01□□□□□ -0.33
DDX39A-214ENST00000590556 IQCJQ1A5X6 159 aa13.01□□□□□ -0.33
DDX39A-214ENST00000590556 NIT1Q86X76 327 aa13.01□□□□□ -0.33
DDX39A-214ENST00000590556 PRELID3AQ96N28 172 aa13.01□□□□□ -0.33
DDX39A-214ENST00000590556 GNB1LQ9BYB4 327 aa13.01□□□□□ -0.33
DDX39A-214ENST00000590556 KRTAP1-5Q9BYS1 174 aa13.01□□□□□ -0.33
DDX39A-214ENST00000590556 K7EP13 123 aa13□□□□□ -0.33
DDX39A-214ENST00000590556 VCYO14598 125 aa13□□□□□ -0.33
DDX39A-214ENST00000590556 HLA-DQA1P01909 254 aa13□□□□□ -0.33
DDX39A-214ENST00000590556 APCSP02743 223 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms