RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, human

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEDD4L-223	ENST00000588516		F8W1H4	67 aa		10.48	□□□□□ -0.73
NEDD4L-223	ENST00000588516		J3QR89	54 aa		10.48	□□□□□ -0.73
NEDD4L-223	ENST00000588516	LINC00315	P59091	139 aa		10.48	□□□□□ -0.73
NEDD4L-223	ENST00000588516	SUMO4	Q6EEV6	95 aa		10.48	□□□□□ -0.73
NEDD4L-223	ENST00000588516	ZFP2	Q6ZN57	461 aa		10.48	□□□□□ -0.73
NEDD4L-223	ENST00000588516	TRAV12-3	A0A0B4J271	114 aa		10.47	□□□□□ -0.73
NEDD4L-223	ENST00000588516		A0A1B0GWB2	263 aa		10.47	□□□□□ -0.73
NEDD4L-223	ENST00000588516	IGHV4-59	P01825	116 aa		10.47	□□□□□ -0.73
NEDD4L-223	ENST00000588516	C12orf74	Q32Q52	190 aa		10.47	□□□□□ -0.73
NEDD4L-223	ENST00000588516	PIK3CD-AS1	Q5SR53	167 aa		10.47	□□□□□ -0.73
NEDD4L-223	ENST00000588516	TRBV7-3	A0A075B6L6	115 aa		10.46	□□□□□ -0.73
NEDD4L-223	ENST00000588516	IGLL5	B9A064	214 aa		10.46	□□□□□ -0.73
NEDD4L-223	ENST00000588516	HOXA3	O43365	443 aa	Predicted RBP	10.46	□□□□□ -0.73
NEDD4L-223	ENST00000588516	NSUN5P1	Q3KNT7	163 aa		10.46	□□□□□ -0.73
NEDD4L-223	ENST00000588516	NEGR1	Q7Z3B1	354 aa		10.46	□□□□□ -0.73
NEDD4L-223	ENST00000588516	MAPKAPK5-AS1	Q8N8E1	139 aa		10.46	□□□□□ -0.73
NEDD4L-223	ENST00000588516	PHLDA1	Q8WV24	401 aa	Predicted RBP	10.46	□□□□□ -0.73
NEDD4L-223	ENST00000588516	ZNF479	Q96JC4	524 aa		10.46	□□□□□ -0.73
NEDD4L-223	ENST00000588516	PRADC1	Q9BSG0	188 aa		10.46	□□□□□ -0.73
NEDD4L-223	ENST00000588516	EDA2R	Q9HAV5	297 aa		10.46	□□□□□ -0.73
NEDD4L-223	ENST00000588516	TP53TG1	Q9Y2A0	90 aa		10.46	□□□□□ -0.73
NEDD4L-223	ENST00000588516	SDHAF1	A6NFY7	115 aa		10.45	□□□□□ -0.74
NEDD4L-223	ENST00000588516	IGIP	A6NJ69	53 aa		10.45	□□□□□ -0.74
NEDD4L-223	ENST00000588516	C11orf86	A6NJI1	115 aa		10.45	□□□□□ -0.74
NEDD4L-223	ENST00000588516	ZNF815P	A8K554	130 aa		10.45	□□□□□ -0.74
NEDD4L-223	ENST00000588516	TGFA	P01135	160 aa		10.45	□□□□□ -0.74
NEDD4L-223	ENST00000588516	AVP	P01185	164 aa		10.45	□□□□□ -0.74
NEDD4L-223	ENST00000588516	ZNF688	P0C7X2	276 aa		10.45	□□□□□ -0.74
NEDD4L-223	ENST00000588516	SRD5A1	P18405	259 aa		10.45	□□□□□ -0.74
NEDD4L-223	ENST00000588516	SCGB1D4	Q6XE38	83 aa		10.45	□□□□□ -0.74
NEDD4L-223	ENST00000588516		Q6YL49	198 aa		10.45	□□□□□ -0.74
NEDD4L-223	ENST00000588516		Q6ZS46	218 aa		10.45	□□□□□ -0.74
NEDD4L-223	ENST00000588516	PTH2	Q96A98	100 aa		10.45	□□□□□ -0.74
NEDD4L-223	ENST00000588516	PEMT	Q9UBM1	199 aa		10.45	□□□□□ -0.74
NEDD4L-223	ENST00000588516		G3V4G9	280 aa		10.44	□□□□□ -0.74
NEDD4L-223	ENST00000588516	CRYBA4	P53673	196 aa		10.44	□□□□□ -0.74
NEDD4L-223	ENST00000588516	COTL1	Q14019	142 aa		10.44	□□□□□ -0.74
NEDD4L-223	ENST00000588516	RRN3P1	Q2M238	152 aa		10.44	□□□□□ -0.74
NEDD4L-223	ENST00000588516	ZNF256	Q9Y2P7	627 aa	Predicted RBP	10.44	□□□□□ -0.74
NEDD4L-223	ENST00000588516		I3L3M4	83 aa		10.43	□□□□□ -0.74
NEDD4L-223	ENST00000588516	SRSF9	Q13242	221 aa	Known RBP eCLIP	10.43	□□□□□ -0.74
NEDD4L-223	ENST00000588516	ZNF56	Q15929	161 aa		10.43	□□□□□ -0.74
NEDD4L-223	ENST00000588516	LCNL1	Q6ZST4	164 aa		10.43	□□□□□ -0.74
NEDD4L-223	ENST00000588516	FSHB	P01225	129 aa		10.42	□□□□□ -0.74
NEDD4L-223	ENST00000588516	SYNJ2BP	P57105	145 aa		10.42	□□□□□ -0.74
NEDD4L-223	ENST00000588516	DEFB1	P60022	68 aa		10.42	□□□□□ -0.74
NEDD4L-223	ENST00000588516	TTTY13	Q9BZ97	58 aa		10.42	□□□□□ -0.74
NEDD4L-223	ENST00000588516	SPANXB1	Q9NS25	103 aa	Predicted RBP	10.42	□□□□□ -0.74
NEDD4L-223	ENST00000588516		M0QY20	66 aa		10.41	□□□□□ -0.74
NEDD4L-223	ENST00000588516	HOXD3	P31249	432 aa	Predicted RBP	10.41	□□□□□ -0.74
NEDD4L-223	ENST00000588516	ZNF876P	Q49A33	203 aa		10.41	□□□□□ -0.74
NEDD4L-223	ENST00000588516	NFE4	Q86UQ8	179 aa		10.41	□□□□□ -0.74
NEDD4L-223	ENST00000588516		Q8N1Y9	231 aa		10.41	□□□□□ -0.74
NEDD4L-223	ENST00000588516		A0A087WWL8	130 aa		10.4	□□□□□ -0.74
NEDD4L-223	ENST00000588516		A8MTW9	85 aa		10.4	□□□□□ -0.74
NEDD4L-223	ENST00000588516		A8MWV9	139 aa		10.4	□□□□□ -0.74
NEDD4L-223	ENST00000588516	WFDC12	Q8WWY7	111 aa		10.4	□□□□□ -0.74
NEDD4L-223	ENST00000588516	PLEKHB2	Q96CS7	222 aa		10.4	□□□□□ -0.74
NEDD4L-223	ENST00000588516	LINC00467	Q9BRT7	94 aa		10.4	□□□□□ -0.74
NEDD4L-223	ENST00000588516	MDFIC	Q9P1T7	246 aa		10.4	□□□□□ -0.74
NEDD4L-223	ENST00000588516		A0A096LNT2	108 aa		10.39	□□□□□ -0.75
NEDD4L-223	ENST00000588516	CRYGD	P07320	174 aa		10.39	□□□□□ -0.75
NEDD4L-223	ENST00000588516	LGALS3	P17931	250 aa	Known RBP	10.39	□□□□□ -0.75
NEDD4L-223	ENST00000588516	TMEM95	Q3KNT9	176 aa		10.39	□□□□□ -0.75
NEDD4L-223	ENST00000588516	TCTEX1D4	Q5JR98	221 aa		10.39	□□□□□ -0.75
NEDD4L-223	ENST00000588516	FAM74A4	Q5TZK3	123 aa		10.39	□□□□□ -0.75
NEDD4L-223	ENST00000588516		Q8N2B8	174 aa		10.39	□□□□□ -0.75
NEDD4L-223	ENST00000588516	TMEM86B	Q8N661	226 aa		10.39	□□□□□ -0.75
NEDD4L-223	ENST00000588516	DUX5	Q96PT3	197 aa		10.39	□□□□□ -0.75
NEDD4L-223	ENST00000588516	NAA38	Q9BRA0	125 aa	Known RBP	10.39	□□□□□ -0.75
NEDD4L-223	ENST00000588516	ZNF702P	Q9H963	129 aa		10.39	□□□□□ -0.75
NEDD4L-223	ENST00000588516	PYGO1	Q9Y3Y4	419 aa		10.39	□□□□□ -0.75
NEDD4L-223	ENST00000588516	MGAM2	Q2M2H8	2515 aa		10.39	□□□□□ -0.75
NEDD4L-223	ENST00000588516	MEGF8	Q7Z7M0	2845 aa		10.38	□□□□□ -0.75
NEDD4L-223	ENST00000588516	IGLV4-69	A0A075B6H9	119 aa		10.38	□□□□□ -0.75
NEDD4L-223	ENST00000588516	RHOD	O00212	210 aa		10.38	□□□□□ -0.75
NEDD4L-223	ENST00000588516	LEPROT	O15243	131 aa		10.38	□□□□□ -0.75
NEDD4L-223	ENST00000588516	ZNF415	Q09FC8	603 aa		10.38	□□□□□ -0.75
NEDD4L-223	ENST00000588516	SPINK13	Q1W4C9	94 aa		10.38	□□□□□ -0.75
NEDD4L-223	ENST00000588516	CD300E	Q496F6	205 aa	Predicted RBP	10.38	□□□□□ -0.75
NEDD4L-223	ENST00000588516	GAGE13	Q4V321	117 aa		10.38	□□□□□ -0.75
NEDD4L-223	ENST00000588516	TMEM170B	Q5T4T1	132 aa		10.38	□□□□□ -0.75
NEDD4L-223	ENST00000588516	SPX	Q9BT56	116 aa		10.38	□□□□□ -0.75
NEDD4L-223	ENST00000588516	MUC4	Q99102	2169 aa		10.38	□□□□□ -0.75
NEDD4L-223	ENST00000588516	TG	P01266	2768 aa		10.38	□□□□□ -0.75
NEDD4L-223	ENST00000588516		K7ERJ3	54 aa		10.37	□□□□□ -0.75
NEDD4L-223	ENST00000588516	SPRY2	O43597	315 aa		10.37	□□□□□ -0.75
NEDD4L-223	ENST00000588516	RPL24	P83731	157 aa	Known RBP	10.37	□□□□□ -0.75
NEDD4L-223	ENST00000588516	AMTN	Q6UX39	209 aa		10.37	□□□□□ -0.75
NEDD4L-223	ENST00000588516	C20orf203	Q8NBC4	194 aa		10.37	□□□□□ -0.75
NEDD4L-223	ENST00000588516	RAX2	Q96IS3	184 aa		10.37	□□□□□ -0.75
NEDD4L-223	ENST00000588516	DNAJC30	Q96LL9	226 aa		10.37	□□□□□ -0.75
NEDD4L-223	ENST00000588516	CLUHP3	Q96NS8	147 aa		10.37	□□□□□ -0.75
NEDD4L-223	ENST00000588516	VCX2	Q9H322	139 aa		10.37	□□□□□ -0.75
NEDD4L-223	ENST00000588516		M0R2P5	195 aa		10.36	□□□□□ -0.75
NEDD4L-223	ENST00000588516	TSHB	P01222	138 aa		10.36	□□□□□ -0.75
NEDD4L-223	ENST00000588516	IGHV4-31	P0DP07	118 aa		10.36	□□□□□ -0.75
NEDD4L-223	ENST00000588516	UBE2D1	P51668	147 aa		10.36	□□□□□ -0.75
NEDD4L-223	ENST00000588516	SLC25A29	Q8N8R3	303 aa		10.36	□□□□□ -0.75
NEDD4L-223	ENST00000588516	DLX4	Q92988	240 aa	Predicted RBP	10.36	□□□□□ -0.75

Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms