RNA–Protein interactions for RNA: ENST00000587560.5

H3F3B-206, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene H3F3B, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-206ENST00000587560 HLA-DQA1P01909 254 aa12.72□□□□□ -0.37
H3F3B-206ENST00000587560 P0DMU3 169 aa12.72□□□□□ -0.37
H3F3B-206ENST00000587560 FAM231AP0DMU4 169 aa12.72□□□□□ -0.37
H3F3B-206ENST00000587560 FAM231CP0DMU5 169 aa12.72□□□□□ -0.37
H3F3B-206ENST00000587560 NEXN-AS1Q8NBZ9 246 aa12.72□□□□□ -0.37
H3F3B-206ENST00000587560 TRAV26-2A0A0B4J265 109 aa12.71□□□□□ -0.37
H3F3B-206ENST00000587560 LOC100131303A0A0U1RQF7 123 aa12.71□□□□□ -0.37
H3F3B-206ENST00000587560 F5H697 171 aa12.71□□□□□ -0.37
H3F3B-206ENST00000587560 MT-ND6P03923 174 aa12.71□□□□□ -0.37
H3F3B-206ENST00000587560 A0A0J9YY99 117 aa12.7□□□□□ -0.38
H3F3B-206ENST00000587560 NRACQ8N912 160 aa12.7□□□□□ -0.38
H3F3B-206ENST00000587560 PRADC1Q9BSG0 188 aa12.7□□□□□ -0.38
H3F3B-206ENST00000587560 A0A096LPF7 62 aa12.69□□□□□ -0.38
H3F3B-206ENST00000587560 TRBV6-5A0A0K0K1A5 114 aa12.69□□□□□ -0.38
H3F3B-206ENST00000587560 H7C1H1 209 aa12.69□□□□□ -0.38
H3F3B-206ENST00000587560 GYPEP15421 78 aa12.69□□□□□ -0.38
H3F3B-206ENST00000587560 RPS10P46783 165 aaKnown RBP12.69□□□□□ -0.38
H3F3B-206ENST00000587560 PPBPP02775 128 aa12.68□□□□□ -0.38
H3F3B-206ENST00000587560 DNAJC30Q96LL9 226 aa12.68□□□□□ -0.38
H3F3B-206ENST00000587560 NIT2Q9NQR4 276 aa12.68□□□□□ -0.38
H3F3B-206ENST00000587560 APLNQ9ULZ1 77 aa12.68□□□□□ -0.38
H3F3B-206ENST00000587560 D6R8Y8 96 aa12.67□□□□□ -0.38
H3F3B-206ENST00000587560 SMKR1H3BMG3 65 aa12.67□□□□□ -0.38
H3F3B-206ENST00000587560 PHOX2AO14813 284 aa12.67□□□□□ -0.38
H3F3B-206ENST00000587560 NCR2O95944 276 aa12.67□□□□□ -0.38
H3F3B-206ENST00000587560 UBE2D3P61077 147 aa12.67□□□□□ -0.38
H3F3B-206ENST00000587560 UBE2D2P62837 147 aa12.67□□□□□ -0.38
H3F3B-206ENST00000587560 C15orf53Q8NAA6 179 aa12.67□□□□□ -0.38
H3F3B-206ENST00000587560 RPL39LQ96EH5 51 aaKnown RBP12.67□□□□□ -0.38
H3F3B-206ENST00000587560 MRPL18Q9H0U6 180 aaKnown RBP12.67□□□□□ -0.38
H3F3B-206ENST00000587560 TRBV7-3A0A075B6L6 115 aa12.66□□□□□ -0.38
H3F3B-206ENST00000587560 IGLL5B9A064 214 aa12.66□□□□□ -0.38
H3F3B-206ENST00000587560 APCSP02743 223 aa12.66□□□□□ -0.38
H3F3B-206ENST00000587560 TCTAP57738 103 aa12.66□□□□□ -0.38
H3F3B-206ENST00000587560 ZFAND6Q6FIF0 208 aa12.66□□□□□ -0.38
H3F3B-206ENST00000587560 KLK5Q9Y337 293 aaPredicted RBP12.66□□□□□ -0.38
H3F3B-206ENST00000587560 ICOSQ9Y6W8 199 aa12.66□□□□□ -0.38
H3F3B-206ENST00000587560 RAB5AP20339 215 aa12.65□□□□□ -0.38
H3F3B-206ENST00000587560 CKS2P33552 79 aa12.65□□□□□ -0.38
H3F3B-206ENST00000587560 MRPL23Q16540 153 aaKnown RBP12.65□□□□□ -0.38
H3F3B-206ENST00000587560 ORMDL3Q8N138 153 aa12.65□□□□□ -0.38
H3F3B-206ENST00000587560 TRAPPC1Q9Y5R8 145 aa12.65□□□□□ -0.38
H3F3B-206ENST00000587560 GAGE12JA6NER3 117 aa12.64□□□□□ -0.39
H3F3B-206ENST00000587560 PRSS47A8MTI9 375 aa12.64□□□□□ -0.39
H3F3B-206ENST00000587560 NPYP01303 97 aa12.64□□□□□ -0.39
H3F3B-206ENST00000587560 POLR2KP53803 58 aaKnown RBP12.64□□□□□ -0.39
H3F3B-206ENST00000587560 RPL36AP83881 106 aaKnown RBP12.64□□□□□ -0.39
H3F3B-206ENST00000587560 GAGE1Q13065 139 aa12.64□□□□□ -0.39
H3F3B-206ENST00000587560 GAGE4Q13068 117 aa12.64□□□□□ -0.39
H3F3B-206ENST00000587560 GAGE5Q13069 117 aa12.64□□□□□ -0.39
H3F3B-206ENST00000587560 GAGE13Q4V321 117 aa12.64□□□□□ -0.39
H3F3B-206ENST00000587560 ZNRF2Q8NHG8 242 aa12.64□□□□□ -0.39
H3F3B-206ENST00000587560 RPL36ALQ969Q0 106 aaKnown RBP12.64□□□□□ -0.39
H3F3B-206ENST00000587560 KIAA1109Q2LD37 5005 aa12.64□□□□□ -0.39
H3F3B-206ENST00000587560 TNFRSF6BO95407 300 aa12.63□□□□□ -0.39
H3F3B-206ENST00000587560 PPP1R17O96001 155 aa12.63□□□□□ -0.39
H3F3B-206ENST00000587560 RPL32P62910 135 aaKnown RBP12.63□□□□□ -0.39
H3F3B-206ENST00000587560 KIAA1644Q3SXP7 199 aa12.63□□□□□ -0.39
H3F3B-206ENST00000587560 OR10J3Q5JRS4 329 aa12.63□□□□□ -0.39
H3F3B-206ENST00000587560 ALKBH7Q9BT30 221 aaPredicted RBP12.63□□□□□ -0.39
H3F3B-206ENST00000587560 LAMTOR2Q9Y2Q5 125 aa12.63□□□□□ -0.39
H3F3B-206ENST00000587560 STARD9Q9P2P6 4700 aa12.62□□□□□ -0.39
H3F3B-206ENST00000587560 TIRAPP58753 221 aa12.62□□□□□ -0.39
H3F3B-206ENST00000587560 FABP9Q0Z7S8 132 aa12.62□□□□□ -0.39
H3F3B-206ENST00000587560 SH2D6Q7Z4S9 175 aa12.62□□□□□ -0.39
H3F3B-206ENST00000587560 PRELID3AQ96N28 172 aa12.62□□□□□ -0.39
H3F3B-206ENST00000587560 C20orf78Q9BR46 151 aa12.62□□□□□ -0.39
H3F3B-206ENST00000587560 SRIP30626 198 aa12.61□□□□□ -0.39
H3F3B-206ENST00000587560 TMEM70Q9BUB7 260 aa12.61□□□□□ -0.39
H3F3B-206ENST00000587560 TNFRSF18Q9Y5U5 241 aa12.61□□□□□ -0.39
H3F3B-206ENST00000587560 TRBV27A0A0K0K1C4 114 aa12.6□□□□□ -0.39
H3F3B-206ENST00000587560 SDHAF1A6NFY7 115 aa12.6□□□□□ -0.39
H3F3B-206ENST00000587560 NUDT3O95989 172 aa12.6□□□□□ -0.39
H3F3B-206ENST00000587560 SUMO2P61956 95 aaKnown RBP12.6□□□□□ -0.39
H3F3B-206ENST00000587560 NEGR1Q7Z3B1 354 aa12.6□□□□□ -0.39
H3F3B-206ENST00000587560 ATP6V0E2Q8NHE4 81 aa12.6□□□□□ -0.39
H3F3B-206ENST00000587560 IGLV2-18A0A075B6J9 118 aa12.59□□□□□ -0.39
H3F3B-206ENST00000587560 TRGC2P03986 189 aa12.59□□□□□ -0.39
H3F3B-206ENST00000587560 DAZ4Q86SG3 579 aaKnown RBP12.59□□□□□ -0.39
H3F3B-206ENST00000587560 ST20Q9HBF5 79 aa12.59□□□□□ -0.39
H3F3B-206ENST00000587560 DAZ3Q9NR90 486 aaKnown RBP12.59□□□□□ -0.39
H3F3B-206ENST00000587560 ESRGQ1W209 222 aa12.58□□□□□ -0.4
H3F3B-206ENST00000587560 LYPD5Q6UWN5 251 aa12.58□□□□□ -0.4
H3F3B-206ENST00000587560 GTSF1LQ9H1H1 148 aa12.58□□□□□ -0.4
H3F3B-206ENST00000587560 NTM-AS1Q6ZSK4 140 aa12.57□□□□□ -0.4
H3F3B-206ENST00000587560 SMIM2Q9BVW6 85 aa12.57□□□□□ -0.4
H3F3B-206ENST00000587560 IGHV3-38A0A0C4DH36 116 aa12.56□□□□□ -0.4
H3F3B-206ENST00000587560 VCYO14598 125 aa12.55□□□□□ -0.4
H3F3B-206ENST00000587560 I3L3M4 83 aa12.54□□□□□ -0.4
H3F3B-206ENST00000587560 TSHBP01222 138 aa12.54□□□□□ -0.4
H3F3B-206ENST00000587560 C18orf32Q8TCD1 76 aa12.54□□□□□ -0.4
H3F3B-206ENST00000587560 LINC00588Q9Y4M8 146 aa12.54□□□□□ -0.4
H3F3B-206ENST00000587560 PLECQ15149 4684 aaKnown RBP12.54□□□□□ -0.4
H3F3B-206ENST00000587560 LINC01546A6NGU7 62 aa12.53□□□□□ -0.4
H3F3B-206ENST00000587560 LELP1Q5T871 98 aa12.53□□□□□ -0.4
H3F3B-206ENST00000587560 MAP1LC3AQ9H492 121 aa12.53□□□□□ -0.4
H3F3B-206ENST00000587560 MRPS16Q9Y3D3 137 aaKnown RBP12.53□□□□□ -0.4
H3F3B-206ENST00000587560 ABCA13Q86UQ4 5058 aa12.53□□□□□ -0.4
H3F3B-206ENST00000587560 TRBV6-8A0A0A6YYG3 113 aa12.52□□□□□ -0.41
H3F3B-206ENST00000587560 IQCJQ1A5X6 159 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms