RNA–Protein interactions for RNA: ENST00000587290.5

PRKCSH-204, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 780 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-204ENST00000587290 SNAI2O43623 268 aa9.83□□□□□ -0.84
PRKCSH-204ENST00000587290 GAGE6Q13070 117 aa9.83□□□□□ -0.84
PRKCSH-204ENST00000587290 SPANXN1Q5VSR9 72 aa9.83□□□□□ -0.84
PRKCSH-204ENST00000587290 PRSS1P07477 247 aa9.82□□□□□ -0.84
PRKCSH-204ENST00000587290 GZMBP10144 247 aa9.82□□□□□ -0.84
PRKCSH-204ENST00000587290 HNRNPA3P51991 378 aaKnown RBP9.82□□□□□ -0.84
PRKCSH-204ENST00000587290 KCNRGQ8N5I3 272 aa9.82□□□□□ -0.84
PRKCSH-204ENST00000587290 MBD3L1Q8WWY6 194 aa9.82□□□□□ -0.84
PRKCSH-204ENST00000587290 DERL1Q9BUN8 251 aa9.82□□□□□ -0.84
PRKCSH-204ENST00000587290 HMCN2Q8NDA2 5059 aa9.81□□□□□ -0.84
PRKCSH-204ENST00000587290 PANO1I0J062 215 aa9.81□□□□□ -0.84
PRKCSH-204ENST00000587290 PFDN1O60925 122 aa9.81□□□□□ -0.84
PRKCSH-204ENST00000587290 RBX1P62877 108 aa9.81□□□□□ -0.84
PRKCSH-204ENST00000587290 C14orf177Q52M58 125 aa9.81□□□□□ -0.84
PRKCSH-204ENST00000587290 SSBP4Q9BWG4 385 aaPredicted RBP9.81□□□□□ -0.84
PRKCSH-204ENST00000587290 KIF25-AS1Q9Y6Z4 181 aa9.81□□□□□ -0.84
PRKCSH-204ENST00000587290 CXCL1P09341 107 aa9.8□□□□□ -0.84
PRKCSH-204ENST00000587290 OR5AL1P0C617 328 aa9.8□□□□□ -0.84
PRKCSH-204ENST00000587290 KRTAP26-1Q6PEX3 210 aa9.8□□□□□ -0.84
PRKCSH-204ENST00000587290 LINC00269Q8N2A0 174 aa9.8□□□□□ -0.84
PRKCSH-204ENST00000587290 TPPP3Q9BW30 176 aa9.8□□□□□ -0.84
PRKCSH-204ENST00000587290 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.8□□□□□ -0.84
PRKCSH-204ENST00000587290 IGLV10-54A0A075B6I4 117 aa9.79□□□□□ -0.84
PRKCSH-204ENST00000587290 MGPP08493 103 aa9.79□□□□□ -0.84
PRKCSH-204ENST00000587290 RPL35P42766 123 aaKnown RBP9.79□□□□□ -0.84
PRKCSH-204ENST00000587290 RPL37AP61513 92 aaKnown RBP9.79□□□□□ -0.84
PRKCSH-204ENST00000587290 MIAQ16674 131 aa9.79□□□□□ -0.84
PRKCSH-204ENST00000587290 RGS21Q2M5E4 152 aa9.79□□□□□ -0.84
PRKCSH-204ENST00000587290 TMUB2Q71RG4 321 aa9.79□□□□□ -0.84
PRKCSH-204ENST00000587290 AP1S3Q96PC3 154 aa9.79□□□□□ -0.84
PRKCSH-204ENST00000587290 VAX2Q9UIW0 290 aa9.79□□□□□ -0.84
PRKCSH-204ENST00000587290 S100A9P06702 114 aaKnown RBP9.78□□□□□ -0.84
PRKCSH-204ENST00000587290 CCL20P78556 96 aa9.78□□□□□ -0.84
PRKCSH-204ENST00000587290 ZNF345Q14585 488 aa9.78□□□□□ -0.84
PRKCSH-204ENST00000587290 PRR34Q9NV39 138 aa9.78□□□□□ -0.84
PRKCSH-204ENST00000587290 UMAD1C9J7I0 102 aa9.77□□□□□ -0.85
PRKCSH-204ENST00000587290 BCL2L11O43521 198 aa9.77□□□□□ -0.85
PRKCSH-204ENST00000587290 H2AFB1P0C5Y9 115 aa9.77□□□□□ -0.85
PRKCSH-204ENST00000587290 SMIM17P0DL12 118 aa9.77□□□□□ -0.85
PRKCSH-204ENST00000587290 CENPWQ5EE01 88 aa9.77□□□□□ -0.85
PRKCSH-204ENST00000587290 DAZAP1Q96EP5 407 aaKnown RBP9.77□□□□□ -0.85
PRKCSH-204ENST00000587290 GNG13Q9P2W3 67 aa9.77□□□□□ -0.85
PRKCSH-204ENST00000587290 TRBV25-1A0A075B6N4 114 aa9.76□□□□□ -0.85
PRKCSH-204ENST00000587290 SUMO4Q6EEV6 95 aa9.76□□□□□ -0.85
PRKCSH-204ENST00000587290 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.76□□□□□ -0.85
PRKCSH-204ENST00000587290 GFRA4Q9GZZ7 299 aa9.76□□□□□ -0.85
PRKCSH-204ENST00000587290 M0QY20 66 aa9.75□□□□□ -0.85
PRKCSH-204ENST00000587290 IGLC6P0CF74 106 aa9.75□□□□□ -0.85
PRKCSH-204ENST00000587290 NKX2-5P52952 324 aaPredicted RBP9.75□□□□□ -0.85
PRKCSH-204ENST00000587290 C9orf163Q8N9P6 203 aa9.75□□□□□ -0.85
PRKCSH-204ENST00000587290 FER1L6-AS1Q8NA97 138 aa9.75□□□□□ -0.85
PRKCSH-204ENST00000587290 UBR4Q5T4S7 5183 aa9.75□□□□□ -0.85
PRKCSH-204ENST00000587290 IGLV4-60A0A075B6I1 120 aa9.74□□□□□ -0.85
PRKCSH-204ENST00000587290 IGHV1-24A0A0C4DH33 117 aa9.74□□□□□ -0.85
PRKCSH-204ENST00000587290 KANTRA0A1W2PQU2 76 aa9.74□□□□□ -0.85
PRKCSH-204ENST00000587290 RAB19A4D1S5 217 aa9.74□□□□□ -0.85
PRKCSH-204ENST00000587290 OXTP01178 125 aa9.74□□□□□ -0.85
PRKCSH-204ENST00000587290 RAB5CP51148 216 aa9.74□□□□□ -0.85
PRKCSH-204ENST00000587290 PKIAP61925 76 aa9.74□□□□□ -0.85
PRKCSH-204ENST00000587290 REG3AQ06141 175 aa9.74□□□□□ -0.85
PRKCSH-204ENST00000587290 IQCJQ1A5X6 159 aa9.74□□□□□ -0.85
PRKCSH-204ENST00000587290 C20orf203Q8NBC4 194 aa9.74□□□□□ -0.85
PRKCSH-204ENST00000587290 OR2D3Q8NGH3 330 aa9.74□□□□□ -0.85
PRKCSH-204ENST00000587290 C11orf52Q96A22 123 aa9.74□□□□□ -0.85
PRKCSH-204ENST00000587290 HMSDA8MTL9 139 aa9.73□□□□□ -0.85
PRKCSH-204ENST00000587290 TMEM97Q5BJF2 176 aa9.73□□□□□ -0.85
PRKCSH-204ENST00000587290 DGAT2L7PQ6IED9 249 aa9.73□□□□□ -0.85
PRKCSH-204ENST00000587290 A0A0D9SG52 128 aa9.72□□□□□ -0.85
PRKCSH-204ENST00000587290 CHTF8P0CG12 524 aa9.72□□□□□ -0.85
PRKCSH-204ENST00000587290 SERTAD4-AS1Q5TG53 156 aa9.72□□□□□ -0.85
PRKCSH-204ENST00000587290 SDIM1Q6ZPB5 146 aa9.72□□□□□ -0.85
PRKCSH-204ENST00000587290 hDV102S1A0JD36 115 aa9.71□□□□□ -0.86
PRKCSH-204ENST00000587290 C19orf71A6NCJ1 209 aa9.71□□□□□ -0.86
PRKCSH-204ENST00000587290 SLPIP03973 132 aa9.71□□□□□ -0.86
PRKCSH-204ENST00000587290 TMEM243Q9BU79 118 aa9.71□□□□□ -0.86
PRKCSH-204ENST00000587290 MANBALQ9NQG1 85 aa9.71□□□□□ -0.86
PRKCSH-204ENST00000587290 TRBV20OR9-2A0A075B6H5 130 aa9.7□□□□□ -0.86
PRKCSH-204ENST00000587290 LYZL1Q6UWQ5 148 aa9.7□□□□□ -0.86
PRKCSH-204ENST00000587290 PLA2G2DQ9UNK4 145 aa9.7□□□□□ -0.86
PRKCSH-204ENST00000587290 H7C1H1 209 aa9.69□□□□□ -0.86
PRKCSH-204ENST00000587290 GNG4P50150 75 aa9.69□□□□□ -0.86
PRKCSH-204ENST00000587290 RASL11AQ6T310 242 aa9.69□□□□□ -0.86
PRKCSH-204ENST00000587290 RPS20P60866 119 aaKnown RBP9.68□□□□□ -0.86
PRKCSH-204ENST00000587290 CACNG7P62955 275 aa9.68□□□□□ -0.86
PRKCSH-204ENST00000587290 TRAV26-2A0A0B4J265 109 aa9.67□□□□□ -0.86
PRKCSH-204ENST00000587290 IGKV3OR2-268A0A0C4DH90 116 aa9.67□□□□□ -0.86
PRKCSH-204ENST00000587290 P01737 135 aa9.67□□□□□ -0.86
PRKCSH-204ENST00000587290 MT1HL1P0DM35 61 aa9.67□□□□□ -0.86
PRKCSH-204ENST00000587290 NTF3P20783 257 aa9.67□□□□□ -0.86
PRKCSH-204ENST00000587290 CNBPP62633 177 aaKnown RBP9.67□□□□□ -0.86
PRKCSH-204ENST00000587290 CLRN3Q8NCR9 226 aa9.67□□□□□ -0.86
PRKCSH-204ENST00000587290 TRAV1-1A0A0B4J248 108 aa9.66□□□□□ -0.86
PRKCSH-204ENST00000587290 IFNA1P01562 189 aa9.66□□□□□ -0.86
PRKCSH-204ENST00000587290 AMTP48728 403 aa9.66□□□□□ -0.86
PRKCSH-204ENST00000587290 EIF5AP63241 154 aaKnown RBP9.66□□□□□ -0.86
PRKCSH-204ENST00000587290 MEF2BQ02080 365 aaPredicted RBP9.66□□□□□ -0.86
PRKCSH-204ENST00000587290 CIRBPQ14011 172 aaKnown RBP9.66□□□□□ -0.86
PRKCSH-204ENST00000587290 DPH3P1Q9H4G8 78 aa9.66□□□□□ -0.86
PRKCSH-204ENST00000587290 NIT2Q9NQR4 276 aa9.66□□□□□ -0.86
PRKCSH-204ENST00000587290 MED9Q9NWA0 146 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms